Carassius auratus (goldfish): 113038238
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Entry
113038238 CDS
T07313
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113038238 (fubp1)
03041 Spliceosome [BR:
caua03041
]
113038238 (fubp1)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113038238 (fubp1)
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113038238 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_PNO1_2nd
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
113038238
NCBI-ProteinID:
XP_026051304
Ensembl:
ENSCARG00000054812
UniProt:
A0A6P6IU76
LinkDB
All DBs
Position
2:complement(25152211..25167424)
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AA seq
648 aa
AA seq
DB search
MADYSNVAPPSSNTGGGMNDAFKDALQRARQIAAKIGGDGVSPSPVSNEFGYGGQKRPLE
DGDQPETKKVPPSDPFSSVMGGMGGPTRSISEEFKVPDGMVGFIIGRGGEQISRIQQDSG
CKIQIAPDSGGMPERSVTLTGAPDSIQAAKRLLSEIVEKGRPSPAFHHNDGPGMSVQEMM
IPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMV
MDLIRDQGFREQRGEYGSRVGGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFK
PDDGSTPERIAQIMGPPDRAQHAADIISDLLRSVEAGGPPGHGGRGRGRGQGNWNMGPPG
GLQEFTFTVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQ
QIDYARQLVEEKIGGPVSPMGGPPGPHGGPSHGPPGPPGPPAPMGPYNPGPYGQGPPGPH
GPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYSQYQQQPQGPMTPTSAAPG
TTQTNGQGDPQAPGQSGQADYTKAWEEYYKKLGQGQPQQDYTKAWEEYYKKQGQAAPQAA
AATASQPGGQPDYSAAWAEYYRQQAAYYGQGAPQAMGAAPQAQQVHLR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccgactactctaatgtcgctccgccatcctcaaacaccggtggagggatgaacgat
gcttttaaagacgcccttcagagagccagacaaatagctgccaaaataggaggtgatgga
gtatccccctctccagtttccaatgagtttggttatggaggacagaagagacctcttgaa
gatggagatcaaccagaaaccaagaaggttccaccaagtgatcctttttcatctgtaatg
ggaggcatgggtggcccaacaaggtctatatcagaagagttcaaggttccagatggcatg
gttggcttcattattggaaggggaggagaacagatttctagaatacagcaggattccggt
tgcaaaatacagattgctcctgacagtggtggcatgcctgagaggtcagtgacattaaca
ggcgcacctgattcaatccaggctgcaaagaggttgctctcggagattgtagagaaaggc
agaccttctccagcattccaccacaatgatggaccagggatgtctgttcaggagatgatg
atccctgcctccaaagctggtctggtcatcggaaagggaggagaaacaatcaaacagtta
caggaacgtgctggagtcaaaatggtcatgattcaagatggaccccaaaacacaggtgct
gataaaccactcaggatctctggcgatccttttaaagttcagcaagctaaagacatggtg
atggatctaatccgagatcagggtttccgggaacagagaggagagtatggttctcgagtt
ggcggtggagacagtttggatgtccctgtgccaaggtttgcagtgggaattgtgattggt
aggaatggtgaaatgatcaaaaagattcagaatgacactggtgtgaggattcagttcaaa
ccagatgatggctccacaccagagaggatcgctcagattatggggcctccagacagggca
cagcatgcagcagatatcatatctgacctgctgcggagtgttgaggccggaggcccccct
ggtcatgggggcagagggaggggccgtggacagggaaactggaacatgggccctcctgga
ggcttgcaggaattcactttcactgtgcctaccatgaagaccggcctaatcattggaaaa
ggtggtgaaaccattaagaacatcagccagcagtctggagccaggatagagttacaaaga
aaccctccacctaactcagaccctaatataaagatcttcacagtccgtggatcacctcaa
cagattgattatgccagacaactggtcgaggagaagattggaggtccagttagccctatg
ggtggtcctcctgggccccatggaggtccttctcatggccctcccggtccaccaggacca
cctgctcccatgggtccatacaaccctgggccctatggccagggccctcctggaccacat
ggtcccccggcaccataccagcctcaaggctggggcaacggataccctcactggcagcaa
ggtcagccagatcccaataaagcagcggctgatgctaatgcagctgcatgggcagcctat
tattctcagtaccaacagcagccccagggccccatgacaccaacttctgcagcccctggc
acaacccaaaccaacggacaaggtgacccgcaagctccaggtcaaagtggacaggcagat
tacaccaaggcctgggaggaatattacaagaaattgggtcaaggtcagcctcagcaggac
tacacaaaggcatgggaagagtactataaaaaacaaggtcaagctgcgcctcaggcagct
gcagcgacggcgtctcagccaggaggtcagccagattacagtgcagcgtgggcagaatac
taccgccagcaggcagcgtactatggccaaggtgcgcctcaggcgatgggagctgcaccc
caggctcagcaggtacacctccgctaa
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