Carassius auratus (goldfish): 113038251
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Entry
113038251 CDS
T07313
Name
(RefSeq) protein patched homolog 1-like isoform X1
KO
K11101
patched 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113038251
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
113038251
NCBI-ProteinID:
XP_026051325
Ensembl:
ENSCARG00000032827
UniProt:
A0A6P6IU56
LinkDB
All DBs
Position
21:3916877..3949036
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AA seq
1452 aa
AA seq
DB search
MLVFSWARDQMSTSRSYIRPTSLALGSFQPGFLCLLKMRFKMCQTESNTMKIKQGKAVGQ
KAPLWIRATFQAFLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEKLWVEAG
SRVSKELRYTKEKQGEESVFTSQMLIQIPKQEGTNILTQEALLLHLEAALSASKVQVSLY
GKSWDLNKICFKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGSKLQGGSAYLPGMPD
IQWMNLDPLKLMEELSQFTSLESFREMLDKAQVGHAYMNRPCLDPNDTDCPHSAPNKDPR
QVPDIAAELQSGCHGFSKKFMHWQEELILGERVKDSQNALQSAEALQTMFLLMSPKQLYE
HFKDDYEIHDINWNEDKATAILESWQRKFVEAVHGSIPQNSSSNVYAFSTTTLNDIMKSF
SDVSVIRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLS
FNAATTQVLPFLALGIGVDDMFLLAHSFTETRSNIPFKERTGDCLRRTGTSVALTSINNM
IAFFMAALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCFYS
PCSSRVIQIRPQEFSDANDNHQHAPSTPTYTGSTITTSTHITTTVQAFTQCDAAGQHIVT
ILPPTSQISTSPPSMVLSTPTPTTDPYSSQLFTTSSSTRDLLAQVEEPKEDRECVPLPFF
RWNLSSFAREKYAPLLLKPETKTVVVVVFVALLSLSLYGTTMVHDGLYLTDIVPRDTKEY
DFITAQFKYFSFYNMYLVTMDGFDYARSQRQLLQLHNAFNSVKYVVKDSNHKLPRMWLHY
FQDWLKGLQATFDADWEAGRITYDSYRNGTEDGALAYKLLIQTGSKKDPFNYSQLTSRRL
VDEDGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYDTTGENLRIPAAEP
LEFAQFPFYLNGLRQASDFIEAIESVRTICEEFMRQGIQNYPNGYPFLFWEQYIGLRHWF
LLSISLVLACTFLVCAILLLNPWTAGVIVFILAMMTVELFGIMGLIGIKLSAIPVVILIA
SVGIGVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDGAISTLLGVLMLAGSEFDFI
MRYFFAVLAILTLLGILNGLVLLPVLLSLMGPPAEVIPANNASHLQSPSPEPMPPPMNHH
GYYAGHIPKGPRQAFSENSDSEYYSETTTTSGIGEEEYKYCDKSAYITSLAQPPTSHILL
EASKNPSFPKLTVVKPFNENNSKGQNIEFKENAVNSVSSQITRWDNKHEFQGQSRQHLPS
DRTHCPRRTTQCGLGPQPGRGQQQNRTTAPAHSPGALQHPNNAITMVTATASVTVAVHPS
LPGSYQGYMHEEFEDNESDSFDNSKRISQTYGKSTHYKRDSLELQDLESTEKNQHQADQA
LGGAWIQAAKDC
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgttttcctgggccagggatcagatgtcaactagcagatcatatatcaggccc
acctcgctggctctgggtagcttccagcccggttttctatgcctgctcaagatgaggttc
aagatgtgccaaactgaatcaaacacaatgaagattaaacaggggaaagctgtgggacag
aaagcgccactgtggattcgggcgacgttccaggcttttctcttttctctgggctgtcac
atccagcgacactgtggaaaagtccttttcattggacttcttgtgttcggagccctgtct
gttggtttgcgggtcgctgccattgaaacggacattgagaaactatgggtggaagctggc
agtcgggtgagcaaggagctacgttacacaaaagagaagcagggagaggagtcagtgttc
acctcacaaatgctcatacagatacccaaacaggaagggaccaatattcttacacaagag
gctttgctgcttcacctggaagctgctctgtcggccagcaaagttcaagtatctctttat
ggaaaatcttgggatcttaataaaatttgcttcaaatccggagtcccaattatagaaaat
gtcatgattgagaggatgattgacaagcttttcccctgtatgatcgtgactcctttggac
tgcttttgggaaggctccaagctgcagggaggctctgcctatttaccgggcatgccagac
attcagtggatgaatctggaccccctcaagctaatggaggagttgagccagtttacatct
ctagagagcttccgggagatgctagataaggctcaggtgggccatgcctatatgaaccgg
ccatgcttggatcccaacgacacagattgccctcatagtgcccctaataaggacccacgg
caggtgcctgacattgctgctgaacttcagagtggttgccatggtttctccaagaagttc
atgcactggcaggaggagttgatcctgggtgaaagagtaaaggactcccagaatgccttg
cagagtgcggaggcccttcagaccatgtttctcctcatgagtcccaaacagctatatgag
cactttaaagatgactatgagatccatgacatcaactggaatgaggacaaggcaactgcc
atcctggagtcctggcagaggaagttcgttgaggctgtccatgggagcattcctcagaac
tcttcctccaatgtttacgccttctctaccaccactcttaatgacatcatgaagtctttc
tctgatgttagtgtaatcagggtggcaggtggttatctgctcatgctggcatacgcatgc
gtgaccatgctgcgatgggactgtgctaagtctcagggtgctgtagggctggcaggagtg
cttctagttgctctatctgtggctgcaggacttggactgtgctcactgctggggctgtcc
tttaatgctgccaccacgcaggtgctgccattcctggccttgggcattggagttgatgac
atgtttttgctggctcattccttcactgagaccagatccaacatcccgttcaaggagagg
acaggtgactgcctaagaagaaccggcaccagtgtggctctcacctccatcaataacatg
attgcttttttcatggctgccctagtgcctattcctgctctccgggccttctcacttcag
gcggctattgtggtggtctttaactttgccatggttttgctgatcttccctgccattctg
agcttggacctgcacaggcgtgaggacaaaagactggacatcctgtgctgtttctacagt
ccctgttcgtctcgtgtgatccagatccggcctcaggagttctcagatgctaacgacaac
caccagcatgctccttccacccccacctatactggctccactataaccaccagcacccac
atcaccaccactgtgcaggcattcacccagtgtgatgcagctggtcagcatattgtaacc
attctgccacccacttcccagatatccaccagtcctccatccatggtcctatccacaccc
actcccaccactgacccttatagttcccagctgttcaccacctccagctccacccgagac
cttctagcccaggtggaggagcccaaagaagaccgtgagtgtgtgcctctgcccttcttt
cgctggaatttgtcaagctttgcacgggaaaagtatgcccctctgttgctgaagcccgaa
actaagactgtggtggtcgtcgttttcgtggctcttctgagcctcagcctctatggtact
acaatggttcatgatggactctacttgactgatattgtccccagagacacaaaggagtat
gactttatcactgcccagtttaaatacttttccttctataacatgtacctggttaccatg
gatggctttgactatgcccgttctcaaagacagcttctacagcttcacaatgccttcaac
tccgtaaaatatgtcgttaaggacagcaatcacaagcttcccagaatgtggctacactac
ttccaggattggctcaaaggtctgcaggctacatttgatgctgactgggaagctggcaga
atcacctatgacagctatcgcaatggcacagaggatggagcactggcatacaagcttctc
atacaaactggctctaaaaaagaccctttcaactacagccagctcacatctcgtcgcctg
gtggatgaggatggtctgattccaccagaggttttttacatctacctgacagtatgggtc
agtaatgatccgctaggctatgctgcctcccaagccaacttttacccccatcctcgggag
tggatccatgataagtacgacaccactggggagaaccttcgcatccctgcagcagagcct
ctagagttcgctcagtttcctttctacctgaacggcctcagacaagcctcagacttcatt
gaagctattgagagtgtgcgcacaatctgcgaggaatttatgcgtcagggaatccagaac
tatcccaacggctacccctttttgttttgggaacagtacattggtctgcgccactggttc
ttgctgtccatcagcttagtgcttgcctgcaccttcctggtgtgcgccatcctcctgctt
aacccctggactgcaggcgtcattgtttttattttggccatgatgacagtggaacttttt
ggcatcatgggcctaattggtatcaaactgagtgccattcctgttgtcatccttatagcc
tccgttggtattggggtggagtttactgtgcacatcgcactgggtttcctgactgccatt
ggggataggaacactcgttcagccgtggctatggagcatatgttcgctcctgtgattgac
ggtgccatctctactttgttgggagtgctcatgcttgccggatctgagtttgactttatc
atgagatacttctttgcagtgttggccatactgacattgttggggatcctgaatggtttg
gtgctacttccggtactgctttcgctcatgggccccccggctgaggtcatacccgctaac
aatgccagtcatttgcaaagtccctcacctgagcccatgcctcctcctatgaaccaccat
gggtattacgctgggcatatccccaagggaccacgtcaggcattttctgagaattctgat
tccgaatactattctgaaactacaaccacctctggcatcggcgaggaggagtacaagtac
tgtgacaagagcgcatacatcacgtctctagctcaacctccaacctctcatatactgctt
gaagccagcaagaaccccagcttccctaagctcacagtggtaaaaccttttaatgaaaac
aactctaagggacagaacatcgagttcaaggagaacgcggtcaactcggtcagttcacag
atcacacggtgggacaacaaacacgagttccaagggcagagtcgacaacatttacctagc
gacaggactcactgtcctcgaaggactactcagtgtggcctagggccacaaccagggaga
gggcagcaacaaaacaggactacagccccagcacacagccctggggcattgcagcatcct
aacaatgcaatcaccatggttacagcaacagcctctgtgacagtggcagtgcaccccagt
ttgccagggtcataccagggttacatgcatgaagagtttgaggataatgagtccgactct
tttgacaactctaagaggatttctcaaacgtatgggaaatctacacattataagagggac
tctttggaacttcaagatctagaatccacagagaaaaaccagcatcaagctgaccaggcg
ctaggtggtgcatggatccaagcagccaaagattgctag
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