Carassius auratus (goldfish): 113038403
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Entry
113038403 CDS
T07313
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113038403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113038403
Spliceosome [BR:
caua03041
]
Complex B
Other components
Prp19-related factors
113038403
Complex C
113038403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
RRM_3
zf-CCCH
RRM_YTH1
zf-CCCH_4
RRM_7
zf-CCCH_10
zf-CCCH_12
Calcipressin
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
113038403
NCBI-ProteinID:
XP_026051560
Ensembl:
ENSCARG00000050899
UniProt:
A0A6P6IUX0
LinkDB
All DBs
Position
21:9604481..9608637
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AA seq
424 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLTRASSMPRLDLPEDKSITTLYIGGLG
EDVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLDPVPGLPGALPPPPVSDEDASNNYFNLAPTSSHAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMAPPMPPPMAMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctttaggttctaacacttacaacagacaaaactgggaggattcggatttt
ccgattctctgccaaacatgtttgggagaaaacccttacatccggatgaccaaagagaaa
tttggcaaggagtgcaagatctgtgcacgtcccttcactgtgttccgctggtgtcctggg
gtccggatgcgcttcaagaagacagaagtttgtcagacctgcagtaaaatgaaaaatgtc
tgtcaaacctgccttttggatctggaatacggtttgcccattcaagttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatccgacgtaaataaagagtattacactcagaat
atggagagagagattgctaactctgatggcacacgacctgtggggctgcttgggaaggca
ccgagcagcagcgatatgctgctgaaactggctcgtaccacaccgtattacaagaggaac
agaccacacatctgttccttctgggtgaagggggagtgcaagagaggggaagagtgtcca
tacaggcatgagaagcccaccgatccagatgacccgttggctgatcagaacattaaggac
cgttattatggcattaacgatcctgtggctaacaaactcctgacgcgggcctcctccatg
cccagactggacttaccggaggacaagtccatcaccacactctacatcggaggcctggga
gaagacgttacagattctgagctcaggaaccacttctaccagtttggggagattcgcacc
atcaccatcgttcaaaggcagcagtgtgctttcatccagtttgctacacggcaggctgca
gagacggctgccgagaagtcttttaataaactcatcattaatggacgtcgacttaatgtt
aaatggggcaggtcacaggcggctcgaggaaaagagaaggatggggtgacggagagtgga
atcaggctagatccagtgcccggcctccctggtgctctgcccccaccccctgtgtctgat
gaagatgcctccaacaactacttcaacctggctcccaccagctcccatgctgtcatgaac
ctgggacttcctcctccacctggggttgccatgcccccaccgcctggctttggtcctcct
atgttccacaccatggatcccatggccccgccgatgccccctccaatggccatgaggccc
cccggacaggtccactacccatcccaggatcctcagcggatgggtgcccatgcaagtcgc
catggaggcccttag
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