KEGG   Carassius auratus (goldfish): 113038403
Entry
113038403         CDS       T07313                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113038403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113038403
Spliceosome [BR:caua03041]
 Complex B
  Other components
   Prp19-related factors
    113038403
 Complex C
    113038403
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus Nup35_RRM_2 RRM_occluded zf-CCCH_2 RRM_3 zf-CCCH RRM_YTH1 zf-CCCH_4 RRM_7 zf-CCCH_10 zf-CCCH_12 Calcipressin RRM_PARP14_3 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 113038403
NCBI-ProteinID: XP_026051560
Ensembl: ENSCARG00000050899
UniProt: A0A6P6IUX0
LinkDB
Position
21:9604481..9608637
AA seq 424 aa
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLTRASSMPRLDLPEDKSITTLYIGGLG
EDVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLDPVPGLPGALPPPPVSDEDASNNYFNLAPTSSHAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMAPPMPPPMAMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcgacgtctttaggttctaacacttacaacagacaaaactgggaggattcggatttt
ccgattctctgccaaacatgtttgggagaaaacccttacatccggatgaccaaagagaaa
tttggcaaggagtgcaagatctgtgcacgtcccttcactgtgttccgctggtgtcctggg
gtccggatgcgcttcaagaagacagaagtttgtcagacctgcagtaaaatgaaaaatgtc
tgtcaaacctgccttttggatctggaatacggtttgcccattcaagttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatccgacgtaaataaagagtattacactcagaat
atggagagagagattgctaactctgatggcacacgacctgtggggctgcttgggaaggca
ccgagcagcagcgatatgctgctgaaactggctcgtaccacaccgtattacaagaggaac
agaccacacatctgttccttctgggtgaagggggagtgcaagagaggggaagagtgtcca
tacaggcatgagaagcccaccgatccagatgacccgttggctgatcagaacattaaggac
cgttattatggcattaacgatcctgtggctaacaaactcctgacgcgggcctcctccatg
cccagactggacttaccggaggacaagtccatcaccacactctacatcggaggcctggga
gaagacgttacagattctgagctcaggaaccacttctaccagtttggggagattcgcacc
atcaccatcgttcaaaggcagcagtgtgctttcatccagtttgctacacggcaggctgca
gagacggctgccgagaagtcttttaataaactcatcattaatggacgtcgacttaatgtt
aaatggggcaggtcacaggcggctcgaggaaaagagaaggatggggtgacggagagtgga
atcaggctagatccagtgcccggcctccctggtgctctgcccccaccccctgtgtctgat
gaagatgcctccaacaactacttcaacctggctcccaccagctcccatgctgtcatgaac
ctgggacttcctcctccacctggggttgccatgcccccaccgcctggctttggtcctcct
atgttccacaccatggatcccatggccccgccgatgccccctccaatggccatgaggccc
cccggacaggtccactacccatcccaggatcctcagcggatgggtgcccatgcaagtcgc
catggaggcccttag

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