KEGG   Carassius auratus (goldfish): 113038444
Entry
113038444         CDS       T07313                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113038444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113038444
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113038444
SSDB
Motif
Pfam: XRCC1_N Zn-C2H2_12 Rad50_zn_hook zf-C2HC_2
Other DBs
NCBI-GeneID: 113038444
NCBI-ProteinID: XP_026051636
Ensembl: ENSCARG00000011918
UniProt: A0A6P6IVB4
LinkDB
Position
21:complement(10720159..10724243)
AA seq 427 aa
MTQHVQTHLCLCNGSVDSQRKRMAPIKIKHIVSFTSQDSKNGVNNLCEDSSSSRPWLCSV
QDRSGVLRVELQMERASAIGFIDVGNCGSAFIQVDVGRSSWSLDRPYVTLLPTATLMSPV
DSKQGTGRQNVRMFKKVDFLPQAAKESWDRLRVTCTQPFNKRSQFGLSFLRIRTVEDEAE
DSSVQHEDITGENLSTPEKMTSVMEWLSSPAIQNTFFGRITGDVSSEHQRNAGSLSRAER
MVKAAHSNRCSLSTSPCSTTSSTTPPREDNLKSPPGGFRTSSNQLKAPQEQKKKSKARQN
LISSGTPQKRSRPTASTHEPSSTSSHRSAHQAPQSSPETRCPLCGECFSPDYLPFHASTC
LDSDSAELTGVRETELMSSQYSSALDSGADEHSVSCPLCSFRFPPDHIQQHASTCGDTVE
PGSVWMN
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgacgcaacacgttcaaacacacttgtgtttatgcaatggctccgtagacagtcaaaga
aagagaatggctcccatcaaaataaaacatatcgtctcgtttacatcacaggacagtaaa
aatggtgtgaataatctgtgtgaagacagtagcagcagcagaccatggttgtgcagtgtc
caggaccgcagtggagtcctcagggtggagttacagatggagcgagcctccgctatagga
ttcattgatgttggcaactgtggctctgcgttcattcaggttgatgttggccgctcctcc
tggtcattagaccgtccttatgtcaccctgctgcccaccgcaacactcatgagtccagtg
gactccaaacagggcactggccggcaaaatgtgcgcatgtttaaaaaagttgattttctc
cctcaagctgcgaaggagagctgggacagactacgagtcacctgcactcagcctttcaac
aaacggtcacagttcggtctgtcctttctgcgcatccgcaccgtggaagacgaggccgaa
gattcctcagtgcaacatgaagatatcactggtgaaaatctgagcacaccagaaaagatg
acatctgtgatggagtggctttccagtccagctatccaaaacacattttttggacgaatc
acaggggatgtctcctcagagcaccaaaggaatgctgggagtttgagtcgggcagagcgc
atggtcaaagctgcccactcaaacagatgctccttgtcaacatccccctgcagtaccaca
tccagcacaacacctccgagagaagataacctgaaatccccaccaggtggatttaggact
tccagtaaccaactaaaggcccctcaagagcaaaagaagaagtcaaaagcacggcagaac
cttataagcagtggcactccacagaagagatccagacctacagcatccacccatgaaccc
agctcaacaagctcacacagaagtgcccaccaggctccacagagctctcctgagaccaga
tgtcctctttgtggagaatgcttcagtcctgattatctgcctttccatgcctccacctgc
ctggattctgattcagccgagctcacaggtgtcagggaaacagagctcatgagctcacag
tactcttctgctttggactctggcgcagatgagcattcggtttcgtgtcctctttgctcc
ttccgattccccccagaccatatccagcagcacgccagcacctgtggagacacggtcgag
ccaggttctgtgtggatgaactga

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