Carassius auratus (goldfish): 113038541
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Entry
113038541 CDS
T07313
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113038541
03036 Chromosome and associated proteins [BR:
caua03036
]
113038541
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113038541
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
113038541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
S1
Spt6_S1
HHH_9
HHH_3
S1_RRP5
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
113038541
NCBI-ProteinID:
XP_026051837
Ensembl:
ENSCARG00000062608
UniProt:
A0A6P6IZK7
LinkDB
All DBs
Position
21:complement(12643479..12655753)
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKQQRFMEDDEEEEEEENIEDQDEHGNLRGLIDDGDV
EEEEEPQSPREDSDSGEEVRHRRRKRSFNDYLDDDDLDLIEENLGVKVKRRKKKYSRVKT
MDDEGEDDEKDMIADEIFTGEGDGDGELEEGEAVDTLHPRDDEEEEEDEESDIDDFIVDD
DGQPITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDNAEEEEEDQEDESWDRP
KKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELEE
EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFI
AFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPL
ADSTRPLDTADMERLKDVQSLDELGDVYNHFLLYYGRDIPKMQNAARASKKKLKKIKEVS
EEDGEEAEVEEEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRD
SYQRHETEQFPAEPLELAKDYVCSQFNNPEAVLEGARYMVAMQIAREPLVRHVLRQTFQE
RAKINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELNGDQFLKMCLAEEEGLLAIDICID
LVGVKGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQHFLYPQMAKELKNK
LVAEAKDNIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDT
PVFCSLLNGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVAG
ENRDAHMVMEDIKRTISELEQDSSLPAVGVELVDNELAMLYMNSKKSEADFRDYPPLLRQ
AVSVARKIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLGALYCEFINRVNEVGVD
VNRAIAHPYTQSLVQYICGLGTRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCA
GFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEI
LENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNL
LTKETPETFYIGKLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEV
WNHFDSGSCPGQAIGVRTRLDNAVTGFIPTKFISDKVVKHPEERVKVGMTVHCRIMKIDI
EKFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDAETDDVKQEEEQKKKQQRTTYIKRVIAH
PSFHNINFKQAEKMMETMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAF
SLGHTLWINNEEFEDLDEITARYVQPMAAFARDLLGHKYFQECNGGERKKMEEILIRSKK
EKPTFIPYYVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQMFPTVNGLFRWFK
DHYQEPVPGVTPTSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQ
GQNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPGQQ
QAMTTPQYPSSTPQSSHGHHQHSSSTPSSSSSRVRTPQPKASSHTAVDWGKMAEQWLQEK
EAERRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcattgagagcgaggctgaggagtcggaggaggagttcgaggagaaagac
ctgaagcccaaaaagcagcagagatttatggaggatgatgaagaagaagaggaagaagag
aatattgaagatcaggatgagcatggaaacctgagaggcctcattgatgatggcgatgtg
gaagaagaagaagaaccccagagtcccagagaggatagtgactctggtgaagaggtccgt
catcgccggagaaaacgaagttttaatgactatcttgatgatgatgatctggacctcatc
gaggaaaatttaggagtaaaagtgaagagaaggaaaaagaaatactcgcgtgtgaaaacc
atggatgatgagggggaagatgatgagaaagacatgatcgccgacgagatcttcactggc
gagggtgacggagatggagagttggaggaaggagaggctgtggacacacttcacccaaga
gatgacgaagaggaggaagaggatgaggaatccgatattgatgatttcattgtggatgat
gatgggcagcccatcactaaaaagaagggaaagaaattctctggctacactgatgctgcc
ttgcaagaagctcaagagatattcggaggtgactttgactttgccgagttcgacactgag
gcatatgataatgcagaagaggaagaggaggatcaggaggatgagtcatgggatcggcca
aagaagcagaccaagagaagggttggccgccggagcatatttgagatctatgagcccagc
gagctggagagcagccacatgactgatcaggacaatgagatccgctctacagacatgcct
gaaagattccagctgagggccatccctgtaaagcctgctgaggatgatgaactggaggaa
gaagctgaatggatttacaggaatgccttctccacaccgaccatctccatgcaggagagc
acagactatctagatcgtgggacaaccactaatttcagcagaaagggccccagtactatt
gctaaaatcaaagaagctctgaacttcatgaggaaccaacactttgaggttcccttcatt
gcattctacaggaaggagtatgtggaaccagagctgaacattaatgatctgtggaaggtg
tggcagtgggatgagaagtggactcagctgaagaccaggaagcagaacctgacacgtctt
ttccagaggatgcagtcttatcagtttgagcagatctccgctgaccctgacaagccactg
gccgactcaactcgtcctctagacacagctgatatggagagactgaaagacgtccagtct
cttgatgagctgggagacgtctacaaccacttcctgctctactatggccgagacattcct
aagatgcagaatgcagccagggccagcaaaaagaaactgaaaaagatcaaggaagtgtca
gaggaagatggggaagaggcagaagtggaggaggaagaggaagaagaggagcaaaagggt
ccagatctgaaacaagcttcccgtagagatatgtacagcatctgtcagagcgcaggcctt
gacggtcttgccaaaaagtttggtctgaccccagagcagtttggagaaaacttgcgagac
agttatcagaggcacgaaaccgaacagtttcctgccgagcctttggagctggccaaggac
tatgtgtgcagccaatttaacaacccggaggctgttctggaaggtgctcgttacatggtg
gccatgcagattgcccgtgagcctctggtcaggcacgtgctcagacagaccttccaggag
agggccaagattaacatcaagccaactaagaagggcaagaaggacgtggatgaagcacac
tatgcctattccttcaagtacctgaagaacaagcctgtgaaagagctcaatggagatcag
ttcttgaagatgtgccttgctgaggaagaaggcctgctcgccatagacatctgcatcgac
cttgtgggagtcaaagggtacggaggagatcagacctactttgatgaaattaagcagttc
tactacagggatgagttcagtcaccaggtgcaggaatggaacaagcagagaactcttgct
attgagcgttccttgcagcatttcctgtatcctcagatggccaaggaactgaaaaacaag
ctggttgctgaagccaaggacaatattgttaagtcttgttgcaagaagctgtataactgg
ttgaaggtggctccttatcggcctgatcagcaggtagaggaggacgatgacctcatggat
gagtcgcaaggaaagggtatccgtgttcttggggtggcatttgcttctggcagagataca
ccagtgttctgctccctccttaatggtgaaggagaggttgtggactttctcaggcttcct
tatttcctgaagaggagaaatgcgtggagagaggatgaaagggagaaaaagcttcaagat
attgaaaacctcaagaaattcctccttagtaagaagccacatgtcgttgctgttgctggg
gagaatcgtgatgctcatatggtgatggaggacatcaagcgcaccatcagtgagctggag
caggactcctctctgcctgctgtgggagtggagctggtggacaatgagctggctatgctt
tatatgaacagcaagaagtctgaggcggatttcagggactatccacctctgctccggcag
gctgtgtctgtggctcgcaaaattcaggaccccctagtggagtttgcccaagtgtgcagc
agcgatgaggacatcctgtgtttgaaactgcatcccctgcaggaacatgtagtgaaagag
gagctgctgggcgctctttactgcgagttcataaaccgggtgaatgaggttggtgtggat
gtgaaccgggccattgctcacccttacacccagagcctggtccagtacatctgtggcctc
ggtactagaaaaggctcacacttgcttaagattctaaaacagaacaacactaggttagag
aaccgaacccagttggtcaccatgtgccatatgggacccaaagtcttcattaactgtgct
ggcttcatcaagatcgacaccgcctctcttggagacagtactgactcctacatcgaagtc
ttggacggttctcgagtgcaccctgaaacatacgagtgggcacgtaagatggcagtggat
gctctagagtacgacgagtcagcagaagatgccaacccagccggagcgctagaggagatc
cttgagaacccagagaggctcaaggacctggatctagacgccttcgctgaggagctggag
agacagggttatggtaataagggaattacactgtatgacatccgagcggagctcagctgt
agatataaagatctgagagccccatacaggcctcccaacaccgaggaggtctttaacctg
ctcaccaaggagactcctgagaccttctatattggtaaactgatcacatgtgtggtgact
ggcattgctcacagacggccacagggtgagagttatgaccaggccatccgtaatgatgag
acgggtctctggcagtgtccattttgccagcaggacaacttccctgagctcagcgaggtt
tggaatcactttgacagcggctcctgccctgggcaagccatcggagtgagaactaggtta
gataacgctgtcacaggcttcataccaacaaagtttattagtgacaaagtggtgaagcac
cctgaggagagagtcaaggttggcatgaccgtgcactgccgcatcatgaagattgacatc
gagaagttcaacgtggatcttacctgtagaacatctgacctgagtgacaagaacaacgaa
tggaagcttcccaaagacacctactatgattttgatgctgagaccgatgatgtgaaacag
gaagaggagcaaaagaagaagcagcagagaaccacttacattaagcgagtgatcgctcac
ccgtccttccacaacatcaacttcaaacaagcggagaagatgatggaaaccatggaccaa
ggtgatgtggtgattcggcccagcagtaaaggggagaaccacctgacggtcacatggaag
gtggctgatgggatctatcagcatgtagacgtccgtgaggagggtaaagagaatgcgttt
agccttggacatactctttggattaacaatgaggagtttgaggatctggatgaaatcaca
gccaggtatgtccagcccatggctgcattcgcacgagatctgctcggccacaaatacttc
caggagtgcaatggtggtgaaagaaagaaaatggaggagattctcataaggtccaaaaaa
gagaagccgactttcatcccctactatgtttcagcttgtagagacctgccaggcaaattt
ctgctgggttaccaacctagagggaagccaaggatagagtatgtaaccatcactccagat
ggctttaggtatcgctctcagatgttccctacagtcaatggtcttttccgctggttcaag
gaccactaccaggaacctgtgccaggtgtcacaccaaccagcagcagaacgagaacacca
gcatcagtgaatgccacacctgccaacatcaacattgccgacttgactcgagccgtcaac
gctctcccgcgaaacatgacatcccagatgttcaacgccatagcggcggttacaggccag
ggccagaatcccaacacgacgccggcccagtgggcctccagtcagtatggttacagtggc
ggcagcagtgcaggaggtggcggcagcagcagcgcttatcatgttttcgcaacgccccag
cagccgatggccacgcccatgatgacgcccagctactcttacaccacacctggccagcag
caggccatgaccacaccccagtatcccagcagcaccccacagtcctcacacggacaccat
cagcattcgtcctccacaccatcgtcctcgtcatcgagagtgcggacaccacagcccaag
gcaagctcccacaccgccgtggattggggtaagatggccgaacagtggctgcaggagaaa
gaagcagagcggcggaagcaaaagacgccccgtatgacacctcgaccttcacccagcccc
atgatcgagagcacgcccatgtccatcgccggagacgccactcccctcttggacgagatg
gaccgatag
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integrated database retrieval system
