Carassius auratus (goldfish): 113038575
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Entry
113038575 CDS
T07313
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113038575 (ddx10)
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113038575 (ddx10)
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
Helicases
113038575 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
113038575
NCBI-ProteinID:
XP_026051874
Ensembl:
ENSCARG00000065760
UniProt:
A0A6P6IVV5
LinkDB
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Position
21:complement(13003571..13025650)
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AA seq
848 aa
AA seq
DB search
MRDKKDKAKTQIDDDPVKNFEKWKRKYNKTKKRVQKVQKSTKKRDYEVEREVIQKLVNKY
SEINPKEAVKFSDFPLSKKTLKGLHEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKT
LAFLIPVLECLYREQWTAMDGLGALIISPTRELAYQTFEVLRKVGKHHEFSAGLVIGGKD
LKDESEKIHRTNIIICTPGRMLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAII
ENLPKTRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEQAKFSTPATLEQNYVVCELHHK
VNMLFSFLRSHVKKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYND
FVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDGNTYIHRVGRTARYKEGGEALLVLL
PSEEKGMIAQLQEKKVPINKIKVNPEKLVCVQQKLEAFLAQEKEQKERAQRCFVSYLRSV
YLMKNKDVFDVFQLKLPEYAMSLGLAVAPRVRFLSKAQQQKSGVTEDHSGAAGQESEDEL
KSFKAQLKGEQSQSSQSDDDDEDDGDEEETKPAALLCGFNEEDEDDQNDQDLLTVKRKDV
FNINEESQDEEEDTDAKSKIKKQKESKFKDAKKIQKKSFKVNTKKIFTEEGEVVQQWPPL
QKTMVPDEEEEEETSGINVEAAKERLRKEDQEFDKIEYRRKIKEKHREKRLKEKAARREA
SKQHKEEKKGDDDDDDDDDEEEEEEEVVAYLSGANEEFDPSTLPDPDKVHNSESSSEEEE
GDSSDRGGRKRSFSSDSSEDDDDSDDEVQQTQVGKKKPRKESTVTPLDTGLSLAEDEELV
LHLLGSHS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcgggataaaaaggataaagctaaaacgcagatagacgatgaccctgtgaagaatttt
gagaaatggaaaaggaaatacaacaaaaccaagaaacgagtccaaaaagttcaaaagagc
accaagaaacgcgactatgaggtggagagagaagtcatacagaagctggtgaataaatac
tccgagatcaatcccaaagaagctgtgaagttctctgattttccactctcaaaaaagact
ctgaaaggtcttcatgaggctcagtacaggcagcccacagagattcagaggcagacgatt
ggcttcgctttgcaagggagagatgttcttggtgctgcaaagactggctctggaaagact
ctggccttcctcatcccagttttggagtgcttgtaccgtgaacagtggactgcgatggat
ggcctcggcgccctcatcatctctcccacccgagagctggcctatcagaccttcgaggtg
ttgaggaaggtcggcaagcaccatgaattttctgctggtcttgtaatcggtggaaaggat
ctgaaagatgaatcagaaaaaatccatcgcaccaatatcattatctgcaccccaggacgt
atgctgcaacacatggacgagacagccacctttcatgcttcagatctccacatgcttgta
cttgatgaagccgacagaattctggacatgggtttcgccgacacactcaatgccattatt
gaaaaccttccgaaaacacggcagacccttctcttctctgccactcagaccaagtctgtc
aaagatctggccagactgagcctgaagaacccagagtatgtgtgggtccatgagcaggcc
aagttcagtacaccagccactctggaacagaactatgtggtgtgtgagctgcaccataaa
gtcaacatgctcttctcatttttgaggagtcatgttaagaagaagatcattgtgtttttt
gcctgctgcaaagaggttcagtatctgttcagggtcttctgccggttgcgtccaggtatc
tccgtacttgctttgcatggaaaacagcagcagatgaagagggtggaggtttataatgac
tttgtccgcaagacctcagccgtcctctttgccacagacatcgctgccagaggactcgac
ttccctgctgtgaactgggtgctgcagtttgactgtcctgaagatggaaacacatacatc
cacagggtgggcagaacagccaggtataaggagggaggcgaagctcttcttgtcctattg
ccgtcagaggagaagggcatgattgcacagcttcaagagaagaaagttcccattaacaaa
atcaaggtgaacccagagaagttggtgtgcgtccagcagaagttggaggccttcctggca
caggagaaggagcagaaggaacgagcacagaggtgttttgtgtcctacctccgctccgtc
tatctgatgaagaacaaagacgtctttgatgttttccagctcaaactcccagaatatgcc
atgtcactgggtttggcggtggctccgcgggtccgtttcctcagtaaggcccagcagcag
aagagtggggtgacggaggaccacagcggcgctgcaggacaggagtctgaagacgagctc
aagagtttcaaagcccaactcaaaggagagcagtctcagtcctcacagtctgatgatgat
gatgaggatgatggtgatgaggaggagacaaagcctgcagctctgctatgtggctttaat
gaagaggatgaggacgaccagaatgatcaggacctactgactgtcaagcgtaaagatgtg
ttcaatatcaatgaagagagccaggatgaggaggaggacacagatgctaagtccaagatt
aagaaacaaaaggaatccaaattcaaagacgcaaagaaaatccagaaaaagagcttcaag
gtcaacactaagaagatcttcactgaggagggagaggtggtgcagcaatggcctccattg
caaaagaccatggtaccagatgaagaggaggaggaggagacgtctggcattaacgtggag
gcagccaaagagcggcttcgcaaggaagaccaggagttcgacaagatcgagtaccgtcgt
aaaatcaaggagaaacatagggagaaaagactgaaggagaaagcagctcgaagggaagcg
agcaaacagcataaagaggagaagaaaggtgatgatgatgacgacgacgacgatgatgag
gaggaggaggaggaggaggtggtagcgtatctgtcaggtgccaatgaagaatttgacccc
agcacacttcctgatcccgacaaagtgcacaactctgagtcctcctcggaggaggaagaa
ggcgattcatcagaccgaggtggcaggaagagaagtttcagcagcgacagcagtgaggat
gatgatgatagcgatgatgaagtacagcagacacaggtgggcaagaagaagcccaggaag
gagtccacagtaactcctctggacactggcctctcactggctgaagacgaggagctcgtg
ttgcatttattgggcagtcacagctag
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