KEGG   Carassius auratus (goldfish): 113038714
Entry
113038714         CDS       T07313                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113038714 (helq)
Enzymes [BR:caua01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     113038714 (helq)
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    113038714 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DUF3135 Cdd1
Other DBs
NCBI-GeneID: 113038714
NCBI-ProteinID: XP_026052119
Ensembl: ENSCARG00000007636
UniProt: A0A6P6IWG2
LinkDB
Position
21:complement(17188281..17195454)
AA seq 1010 aa
MNTDNHMHEIVVKRNTSSSRKRSRDGMRSHITPAKKRSSFTSETCSTVEGHTHTPDMSEN
KGTELCCSDNEDLFEGYDSIVGDSSFLAKLEDVELQMRQCQDQQTPNACEDDLSDSILAE
DFRDSPPRALPSSQLEFQKAVTSPHKSPSRGAHNTSTPDLMNPRPVVNHADLTANKPPPK
ARRSMKDHLKKILIDNAATSCTVSKTVQQKEAVMTEEMSFAMQAMGSISAEQDLGPFFGL
PSKVKDLILKLKRIQDLYEWQKTCLSLDSVQQRKNLIYSLPTSGGKTLVAEILIFKELLC
RKKDALLILPYISLVQEKVRGLSSFGIELDFMVEEYAGSKGRFPPVKRRNKNSLYVTTIE
KGHSLVNSLIENDRLDNIGLVVVDELHMLGDGSRGAILEMTLSKILYMSKSTQIIGMSAT
LGNVGDLQTFLNAENYTNDFRPVELKEYVKIKDSIYEVNPREETCFSFSRLLDFKYSSGM
QKMDPDHIVALATEVIPQQSCLIFCATKKNCENLAGMICKYLNKEFLKHKKAEKATLLGE
LKSSGNGSLCPVLQKTVPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINL
PARRVILRSPYVATEFLKRSQYKQMVGRAGRAGIDAMGESILILQHKDIDMAKKLLSTPM
EKCYSNLLHDGGRGLLSLVLSLIGLKITTTVEQVRDFMKGTLLSVQEAQVSPERSLWDLT
VESIDTLKQKSLIEVSADVNNQTILQITRLGRATFKGSIDLSYCDLLYQDLSKGLEGLLL
NSFLHLVYLVTPYDMVNQCKPDWMIYFRQFTNLSAAEQKMATAVGVPESFVARKAAGQSV
RKSVDVVVVNRLYLALVLYSLLKETNLWDVSDRFQLTRGFVQTLLSSASAFGSSVLHFTE
ELEEFWAYKALLSELTRRLTYCVQAELIPLMEVAGVMEHRAKQLYNAGYKTLAHLANADP
QILVQTIENLFKRQANQIIASAKMLIKEKAEALQEEVDDLLMLPSDIPLL
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgaatactgacaaccacatgcacgagattgtggtaaagcgcaacacttcgtcttcaaga
aagagatcaagggatggcatgagaagtcacatcactccagccaagaagcggtcaagtttc
acatcagaaacatgctctactgttgaaggacacactcatactccagacatgagtgagaac
aaaggcacagagctgtgctgcagtgataatgaggacttatttgagggttatgacagcatt
gtgggtgacagctcatttctggctaagcttgaagatgtggagctccagatgaggcagtgt
caagaccagcagactccaaatgcctgtgaagatgatctttcagactcaatcttagcagag
gatttcagagattcaccacctagagctttgccgagctctcagcttgaatttcaaaaagct
gtcacgagtccacacaaaagcccttccaggggtgcacataacacctctacccctgatctg
atgaatcccaggccagttgtcaatcatgcagatctcactgccaacaagccacccccaaag
gccagaagaagcatgaaagatcatcttaagaaaatactgatagacaatgcagcaacatcc
tgtactgtctccaagacggtacaacaaaaggaagcagtgatgactgaagaaatgagtttt
gccatgcaggccatggggtccatatcagctgagcaggacctgggccctttttttggtctc
ccatccaaagttaaagaccttattttgaaattaaagagaatccaggacttgtatgagtgg
cagaagacgtgcttgagcctggattcagtgcaacaaaggaaaaatctaatttattcttta
ccaacaagtggaggaaagactctagtggcagagattctcatatttaaagagctcttgtgt
agaaagaaagatgcactgcttattttgccgtacatatccttggttcaggaaaaggttcga
gggttatctagctttggaattgagttggacttcatggtcgaggagtatgctggcagtaaa
gggaggtttcctccagtcaagagaagaaataaaaactctctgtacgtcacaactattgag
aagggtcacagtcttgtcaattcactgattgaaaatgaccgtctagacaatattggtctg
gttgttgtggatgagcttcatatgcttggtgatggaagcaggggggcaattcttgaaatg
actttgtcaaagattctgtacatgagcaaatccacccaaattattggtatgagtgctacg
ctaggcaacgttggagatcttcagactttcctgaatgctgaaaactacaccaacgacttc
agacctgttgagctgaaagagtatgtaaaaataaaggacagcatatatgaagtcaaccca
agggaagagacctgcttcagtttctcacgactcctggattttaagtattccagtggaatg
cagaaaatggacccggaccacatcgtagctctggctactgaagtcatccctcagcagtcc
tgcctcattttctgtgccaccaagaagaactgcgagaacctagctggaatgatctgcaag
tatttaaataaggagtttttgaaacacaagaaggcagagaaagccactcttcttggtgaa
ctgaagagcagtgggaatggatccttgtgtcctgtgctgcagaagactgtgccctttggc
ctggcctaccaccacagcggcctgaccagtgatgagaggaaactggtggaagaggcctat
tcctcaggggtgctttgccttctcacctgcacctctactctcgctgctggcatcaacctt
cctgcacgcagggtcattctgcgctccccatatgtagctacagagtttttaaagagaagt
cagtacaaacagatggtaggcagagcaggaagagcaggaattgatgccatgggtgagagt
atcctgatcctgcagcacaaagatatagacatggccaaaaaactgctttctacaccaatg
gagaagtgttacagtaaccttctacatgatggagggaggggcctcctcagtctcgtcctg
tcactcattgggctgaagataactacaactgtagaacaagtgagggatttcatgaagggc
acactgcttagtgtgcaggaggctcaggtcagtccagagaggagtttgtgggaccttaca
gtggagtctatagatactctgaagcagaagagcctcatcgaagtctctgctgatgtaaat
aatcaaaccattctccagatcaccaggcttgggagagcaacattcaaaggttcaatagac
ctaagctactgtgatctgctctaccaagacttatcgaaagggctggagggtttactcctc
aatagttttcttcacttagtgtatctggttactccatatgacatggtaaatcaatgcaaa
ccagattggatgatctacttcaggcagtttacgaatttgtcagctgctgagcagaagatg
gccactgcggtcggagtgcctgaaagttttgtggctagaaaggcagcaggacagagcgtg
aggaagtctgtggatgttgtggtagtgaataggttgtatctggctttggtgctctactcc
cttctgaaggagacaaacctttgggatgtgtctgatcgatttcagctgaccagaggcttt
gtacagactcttctcagctcagcttccgcatttggctcttccgtgctgcacttcactgag
gagctggaggagttttgggcctacaaggctctactctcagagctgacccgtagattgact
tactgtgtgcaggccgagctcattccactcatggaagtggctggagtcatggagcatcgt
gctaagcagctgtataatgctggttacaagacactggcacatcttgccaatgcagatcca
caaattttggtccaaactattgagaacctcttcaaaagacaagccaatcaaattattgca
tcagccaaaatgttaataaaagagaaagcagaagccttgcaggaggaggtggatgacctg
cttatgctgccatctgatatcccattgttgtaa

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