Carassius auratus (goldfish): 113038776
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Entry
113038776 CDS
T07313
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03082
ATP-dependent chromatin remodeling
caua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113038776
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113038776
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113038776
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113038776
03036 Chromosome and associated proteins [BR:
caua03036
]
113038776
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113038776
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113038776
SWI/SNF complex
113038776
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113038776
PBAF complex
113038776
SWI/SNF complex
113038776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
113038776
NCBI-ProteinID:
XP_026052205
Ensembl:
ENSCARG00000014424
UniProt:
A0A6P6IWU0
LinkDB
All DBs
Position
21:complement(17924634..17937973)
Genome browser
AA seq
377 aa
AA seq
DB search
MALSKTFGQKPIKFQLEQDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
VASSHDHGYTNLATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAFLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDS
ILDEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPETFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFRSDFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQ
DRNTRRMRRLANTAPAW
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagtaaaacatttggacaaaaaccgataaaatttcaactcgagcaagatggg
gatttttacatgataggttcagaggttggaaactacctgcgtatgttcagaggctctctg
tataagcggtacccatcactatggagacgtctcgcgtccgtggaggagaggaaaaagatc
gtagcatcatcacacgatcacggttacacaaatttagccaccagtgtgactctgctgaag
gcgtctgaatgtgaggagatcttcgaggggaatgatgagaagtacaaggcagtgtccatc
agcacagagcctccagcattcctcagggagcaaaaggcgaagaggaacagtcagtgggtg
cccaccctgcccaacagctcccaccacctggacgcagtgccttgctccaccactatcaac
agaaaccgaatgggacgggacaagaaaagaacctttccattatgtttcgatgaccacgac
cctgcagtgatccacgaaaatgcttcccaggcagaggttctggtgcctatccgccttgac
atggagattgatggacagaagctaagagatgccttcacctggaacatgaacgagaaactt
atgactccagagatgttcgctgagatcctgtgtgatgacctggacttgaatcctcttgcc
ttcgtccctgccatcgcctcggctattagacagcagatcgagtcttaccctaccgacagc
attctggatgagcagacggaccagagagtcatcattaagctaaacattcacgttgggaac
atctctctggtggaccagttcgaatgggacatgtcagagaaggagaactcgccagaaaca
ttcgctttgaagctctgctctgagctgggactcggaggagagtttgtcaccaccatcgcc
tacagcatccgcggacagctcagctggcatcagaggacgtacgccttcaggtctgatttc
agtgagaacccattaccaacagtggagattgccattcggaacacaggtgatgccgaccag
tggtgccccctgctggagaccctgacagatgccgagatggagaagaaaatcagagatcag
gacagaaacacaaggcgtatgcgaagacttgccaacacggcccctgcctggtaa
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integrated database retrieval system
