Carassius auratus (goldfish): 113039000
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Entry
113039000 CDS
T07313
Name
(RefSeq) programmed cell death 1 ligand 1-like isoform X1
KO
K06745
programmed cell death 1 ligand 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113039000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
caua04090
]
113039000
CD molecules [BR:
caua04090
]
Proteins
113039000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
NACHT
C2-set_3
V-set
I-set
Ig_2
ig
AAA_25
C1-set
C2-set_2
nSTAND3
AAA_22
AAA_5
Rad17
Sigma54_activ_2
AAA
NB-ARC
ABC_tran
Mg_chelatase
AAA_18
IstB_IS21
AAA_16
DUF2570
Izumo-Ig
RuvB_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
113039000
NCBI-ProteinID:
XP_026052636
UniProt:
A0A6P6IY33
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All DBs
Position
21:23323749..23339507
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AA seq
504 aa
AA seq
DB search
MRGTLVVVFQALLWPVVSASALFTVSLEKSDYEAELHGDVKLVCLFSKVKRLSDLTVIWS
RVEPKPAVDVYRLERGTENHNYTSAAFIKRAQLIHEQLDLNRAVLHLKKLQIKDSGMYRC
IVKEGDDGDYKQVTLKVTAPYTPVKKSTMKTGQDEVELSCESQGFPSAQVIWSDGQNTNL
TERSISTTRSTDEDLFHIISKLTVKRDLVNNYTCSFLVKGEIRETVTFSIPDDLLPHSSA
QHVWIVAVVLVLLAIVFICVILHWRKNGQKNRRNESSQCAFLFPHSSSATTDSLLTVNEN
RSQACDINSEETAEKSLRSALIQQYSELDTSAEMNSRLASYALLSKEGRSLNISSILPDK
KEMILLLGEPGCGKTSVAQILSSCWAERTATDPFNIRRLQLVFQVDCSRAKGDFFQAIKS
SVSYEKPLDVSELRETLLGSRDCLLILDGYEEGNKDLDETLECFLTERQTCRVLITSHPG
KCPALEKNVRTVLQLVQKPESSGS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagggggacgctggtcgtcgtatttcaggctctgctgtggcctgtcgtctcagcatca
gccctgtttacagtcagtttagagaagagcgattacgaggcagagctacatggagatgtc
aaactagtgtgcttgttctccaaggttaaacgtttgtctgacctcactgtcatatggagc
cgagtcgagccgaagccggccgtggatgtgtatcggctggagagaggcacagaaaaccac
aattacaccagtgctgcgttcataaagcgtgcacagctcatccacgagcagctggatcta
aacagagcggtgctgcacttgaagaagctccagataaaagattcaggcatgtaccggtgc
atcgtgaaagagggagatgatggagactacaagcaagtcacgctcaaagttacagctcct
tatactcccgtgaagaaaagcaccatgaagacgggtcaggatgaggtcgagctctcctgt
gagtctcaggggttcccgtccgctcaggttatctggagcgatggccagaacacaaacctc
acagagaggtccatcagcaccacacgctcaacagatgaagatctcttccacatcatcagc
aagctgacggtgaaacgagacctcgtcaataactacacctgctctttcctcgtgaagggc
gagatccgggagacggtcaccttcagcattccagacgacctccttcctcactcttctgct
cagcacgtgtggattgtcgccgtggtccttgtgctgttagccattgtcttcatctgtgta
attctgcattggagaaaaaatggtcagaaaaacagacgtaatgaatcatctcaatgtgct
ttcctgtttccacactcatcctctgccaccactgactctttactgaccgtgaacgagaac
aggtcgcaagcatgtgacataaactcagaagaaacagcagaaaaatctttgaggagcgcg
cttattcaacagtattcagagctggacacaagcgctgagatgaacagcagacttgcttca
tatgctctcctcagcaaagaaggccgatctctaaacatcagctcaatcctgcccgataag
aaagaaatgatccttctgcttggagaaccaggctgcgggaaaaccagcgtagcccaaatc
ctgtcgtcctgctgggcagagaggaccgcgaccgaccccttcaacatccgccggctccag
ctggttttccaggtggactgtagccgagcgaaaggagactttttccaggcgataaaatcc
agcgtttcttatgaaaaaccactagacgtgtcagagctcagagagactcttctgggctcg
agagactgtttgctcatactggacggatatgaagagggaaacaaggacctggatgaaaca
ctcgaatgctttctaacagagcggcagacgtgccgggtgttaatcacatcacatcctgga
aaatgtccagctctggagaaaaacgtcaggacagtattacagctcgttcagaaaccggaa
agttcgggatcatga
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