KEGG   Carassius auratus (goldfish): 113039300
Entry
113039300         CDS       T07313                                 
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
  KO
K10839  UV excision repair protein RAD23
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03420  Nucleotide excision repair
caua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113039300
  09124 Replication and repair
   03420 Nucleotide excision repair
    113039300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:caua03051]
    113039300
   03400 DNA repair and recombination proteins [BR:caua03400]
    113039300
Proteasome [BR:caua03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    113039300
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      113039300
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin UBA_7 Rad60-SLD UBA_Ucp12 UBA_3 Rad60-SLD_2 Crinkler Dsc3_N UBA_2 TPR_Myxo UBA2_UBAP-1 Ubiquitin_4
Other DBs
NCBI-GeneID: 113039300
NCBI-ProteinID: XP_026052920
UniProt: A0A6P6IYR6
LinkDB
Position
22
AA seq 422 aa
MLTITLKTLQQQTFKVQVDEELTVKALKEKIEEEKGQDAFPAVGQKLIYAGKILNDDIPL
KEYKIDEKNFVVVMVTKPKSAAPPQAPAPVPAAATTVSATVDETPAHQPSTPAAPPAVST
VPVSTSTPAPAPIEPAASVEPPVPPITAPPAASEVAAEKPESVSVTPTPISEEEKQEAQE
EQAIAQPEASITDEFGILEAAASILVTGQAYENLVTEIMSMGYEREQVISALRASFNNPD
RAVEYLLMGIPTEPEQPPQEVVQPTPVSNPTPPAPQRPQPPPATAGVESGATQSLANPLE
FLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQQITQHQERFVQMLNEPHAGEAG
AAEAPSAPQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQTFD
DE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgctgacgatcactctaaagaccctccagcagcagactttcaaagtgcaggtcgacgag
gagctgacggtaaaggctctaaaagagaagatcgaggaagaaaaggggcaagatgctttt
ccagctgtcggtcaaaagctaatctatgcaggcaaaattttgaatgacgatatacctcta
aaagaatacaagatagatgagaagaactttgtcgtggtgatggttacaaagcccaaatct
gcagcacctccacaagctcctgctcccgtgccggcagctgccactaccgttagcgcaact
gtcgacgaaacccctgcacatcagccctcaactcctgctgcgcctcctgctgtctccaca
gtgcctgtatcgacctccactcctgctcctgctcccatagaaccagcggcatcagtggag
ccacccgtgccgcccatcacagcgccccctgctgcctcggaggttgcggcagaaaagcct
gagtctgttagcgtgactcccacgccgatctcagaagaagagaaacaggaagcccaagag
gagcaggccattgcgcaaccagaggccagcattacagatgaatttggtattttagaagca
gctgcgtccatactagttacaggtcaagcgtatgagaatttggtgacggaaatcatgtca
atgggttacgagagagaacaggtgatttctgccttacgagcaagtttcaacaatccggac
agagccgtggagtatctccttatgggtattcccacagaacccgagcagccaccacaggaa
gtagtgcagcccacgccagtgtccaaccccacccctccagcaccacagcgacctcagcca
ccacctgccacagccggtgtggagtcgggagcgacgcagtccttggcgaacccgctggag
ttcctgaggaaccagccgcagttccagcagatgcgtcagatcatccagcagaaccctgca
ctgctgcccgcgctcctgcagcaactcggccgcgacaacccgcagctcctgcagcaaatc
acgcagcatcaggagcgattcgtgcagatgttgaacgagccacacgcaggtgaagccgga
gctgctgaagctcccagcgcaccacagaccaactacatccaggtcacgccgcaggagaag
gaggccatcgagaggttaaaagctctggggtttccagagggactcgtcatccaagcctac
ttcgcctgcgagaagaacgaaaaccttgctgcgaacttcctgctccagcagacctttgac
gatgagtga

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