Carassius auratus (goldfish): 113039752
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Entry
113039752 CDS
T07313
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113039752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113039752
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
113039752
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
113039752
NCBI-ProteinID:
XP_026053595
Ensembl:
ENSCARG00000012286
UniProt:
A0A6P6J0P9
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Position
22:12862090..12881378
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AA seq
523 aa
AA seq
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MLGGNGTARGAVRPGNGAGLTPLQVGSTSGALGPVNLPDGGRYDDRPSVEAVLSGSDGDS
DSGDDEESPALDRRGVKRERSEMEVGVSSGSHAGLSAGYGGVSSGVAGAKPGKKTRGRVK
IKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPM
ITSETGKALIQTCLNSPDSPPRTDPSTDQRMSATGFEETDLTYQVSEADGLTEPKEMMKP
VFTAVSLAGGGTSTNSTTTQSSASSSPSSSSVSMHTSSSSCWPLAQSVSSANGTVLKSSP
AGVMQLPGGFTLMPGASLPPGTHTVPLSQLQTHSLAVQCAQTQASSSSSSSTAAHTQATL
FRLPAAVSLAGGAMPQQLQAIQVHPSPQSSDSSPEISQTSTSSTASHTATIVTSSVPSSV
AGHMMYPGAHVMYATSSSALADGGLTVLNTFPQAPGTMHMSHTQGQDSGAVPQMFFTGPP
GTVQIPVSAVPLHSMLINQQPTGSSSATLTELRVVNLDNPKGD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttagggggaaacgggacggccagaggggctgtgcgccccggtaacggcgcggggttg
acccctctacaggtgggcagcacgtctggggctctggggccggtgaacctgcccgacggg
ggcagatacgacgacaggccgtcggtggaggctgtgctgagcggctccgacggagactcg
gactccggggacgacgaggagagccccgcgctggacaggagaggggtgaagcgggagagg
agcgagatggaggtcggtgtgtcctcgggatctcacgcgggactgtctgcgggatacgga
ggggtttcctccggggtggctggggcgaaaccgggcaagaaaacacgaggacgggtgaag
attaagatggagtttatagacaacaagctgagaagatacacgaccttcagcaagagaaag
actggcatcatgaagaaggcttacgaattatccaccttaacagggacgcaagttttgctc
ctggttgccagtgagacgggccacgtctacacgtttgccactcgaaaacttcagcccatg
atcaccagtgaaacgggtaaggccctgatccagacctgcctgaattcccctgactctcca
ccgcgcacggacccttccacagaccagcggatgagtgccacgggattcgaggagaccgac
ctcacgtaccaggtctccgaggctgacgggctcacagagccaaaggagatgatgaagccg
gtgttcacggcggtctctttagctggaggaggcaccagcaccaacagcaccaccacacag
tcgtcagcctcgtcctctccctcctcgtcctccgtctccatgcacacatccagcagcagc
tgctggccgctggcgcagagcgtctccagtgccaacgggacggtgctcaagagctctccg
gcgggggtcatgcagctgcccggaggattcacactcatgccaggcgcttctcttcctcct
ggcacacacactgttcctctcagtcagctgcagacacactctctggccgttcagtgtgca
cagactcaagccagcagcagcagcagcagctccaccgccgcacacacacaggccacgctc
ttccgcctgccggccgccgtctcgctcgcaggtggtgcgatgcctcaacagttacaggcc
atccaggttcaccccagtcctcagagcagtgacagcagtcctgagatcagccagacctcc
accagctccaccgccagccacaccgccaccatagtcacgtcctcagtgccttcttcagtg
gccggtcacatgatgtaccccggagcgcacgtcatgtacgctacgtcctcctccgccctc
gctgacgggggtctgactgtgctcaacaccttccctcaagcccccggcaccatgcacatg
tcccacacacaaggccaagactcaggtgcagtaccccagatgtttttcacgggacctcct
gggaccgtacagatcccggtttcagccgttcctctgcattcgatgttaataaaccagcag
cccacgggtagcagcagtgccaccctcacagagctgcgggtggtgaacctggacaatccc
aaaggagactga
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