Carassius auratus (goldfish): 113039854
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Entry
113039854 CDS
T07313
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
caua
Carassius auratus (goldfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
113039854
NCBI-ProteinID:
XP_026053761
Ensembl:
ENSCARG00000025601
UniProt:
A0A6P6J135
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Position
22:complement(17467601..17479834)
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AA seq
737 aa
AA seq
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MAGPLLSARLFVLVEHLCLLHHIHAGAFYGHKPMPQQHQPLPQLPLLSHGNEGIPQQITQ
HHYHGKETPHLPYGNEMPLLPQYAKERPQIPMHMGKPILGKGETIPRGEKGPPGEPGPMG
LPGPKGPPGLPGHGIPGPTGKPGPQGPPGLPGFGKPGMPGLPGKPGGIGLPGPKGELGPI
GGEGPIGMPGPPGHPGPHGLPGVSKPGAQGLPGQPGTRGEPGQKGFPGIPGFPGPKGENG
NGLPGLPGLKGPPGLPGPPGQVGLPGVGKPGLNGVPGAPGGQGKPGAPGEQGLAGFQGER
GPPGSQGLPGFGKPGLDGLPGKPGLPGGRGEPGPSGLPGNPGLPGFGKPGYPGPKGDKGH
GGLPGPQGPKGEKGHGGPPGMIGPPGPSGLPGPPGHLGQPGGIGFPGQKGEGGTVGPKGQ
LGPKGEPGPPGHPGKPGFPGELGQPGPRGLPGPIGPKGEYGHNGLPGLPGAPGKPGAKGE
IGFPGEKGHPGPMGIPGLMGPAGPIGPPGLPGQKGEYGPPGKPGMPGEGKPGLPGPIGPS
GIPGPGGPPGQPGIPGPPGPPGLPGHPAQSPFIGQILPETGPGIDGAKSGYKKEKPGGAI
IGRNGIEMPAFTAQLTTPFPPVGQPVVFNKILYNGNQNYNSQTGIFTCKIPGIYYFVYHV
NCKGNNVWVALYRNNEPVMYTYDEYKKSYLDQASGSAVLPLQVGDTVHIQLPSDKAAGLY
AGPYVHSSFSGYLLYPM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcctctcctctcagcccgcttgtttgtactggtggagcacctctgtctgcta
catcatatccatgcaggggcattttatggtcacaaaccaatgccccaacagcaccagcct
ctgccacagttacctcttctgtcacatggcaatgaagggataccccaacaaataacccaa
caccattaccatggaaaggaaacaccacacttaccatatggaaatgagatgcctttgctt
ccacagtatgcaaaagaacgtccacagatacccatgcacatgggtaaacctattttagga
aaaggtgaaaccattccaagaggagagaaaggtcctccaggtgagcctggaccaatggga
cttccagggcctaagggccctccaggacttcctggtcatggtatcccaggacctacaggt
aaacctggtcctcagggtccaccaggactcccaggatttggaaagccaggaatgccaggt
ttaccaggaaaacctggaggtataggtttaccaggaccgaagggtgagctgggaccaatt
ggtggtgaagggccaataggaatgccaggacctccaggtcatcccgggcctcatggttta
ccaggtgtctcaaaaccaggtgcacaaggacttccaggacaacctggaactcgtggagaa
cctggacagaagggcttccctggaatccctggttttccaggaccaaaaggtgaaaatggt
aatggcctaccaggactgccaggactgaagggacctcctggacttccaggaccaccagga
caagtaggacttccaggagttggcaaaccaggactgaatggagtacctggggctcctgga
ggccaaggtaaacctggtgcacctggagaacaaggattggctgggttccaaggggaaaga
ggacctccagggtcacaaggactaccaggctttggcaaacctggtctggatggcttgcca
gggaaaccaggtcttccaggtggaaggggcgagccaggtccatctggtttacctggcaac
ccaggcttgcctggttttggcaaacctggatatcccggccctaaaggtgacaaagggcat
ggtggtttgcctggccctcaaggcccaaaaggtgaaaagggtcatggtggtccccctgga
atgattggaccacctgggccaagtggcctaccaggccctccaggtcacttgggacaacct
ggaggcattggtttccctggtcaaaaaggagagggtggtacagtaggacctaagggacaa
cttggtccaaaaggtgaacctgggcctccaggacatccgggcaagccaggattcccagga
gaattggggcagccaggacctagaggcttaccaggtcccataggacctaaaggtgaatat
ggacataacggcttacctggactacctggagcccctggaaagcctggtgcaaaaggagaa
attggattcccaggagaaaaaggtcatccaggacccatgggaatcccaggattaatgggt
ccagcaggaccaataggcccacctggtctaccaggacaaaaaggggaatatggaccacca
gggaaacctggaatgccaggtgagggaaaacctgggcttccaggcccaataggaccatct
ggtatacctggacctggagggcccccaggacaacctggaatacctggtcctcctggccca
cctggcctaccaggacatcctgctcaatctccatttattgggcaaatccttcctgagaca
ggtcctgggatagatggggcaaaaagtggttataagaaagaaaagcctggaggagccatt
attggtaggaatggcatagagatgcctgcttttacagctcagctgacaacaccatttcct
ccagttgggcaacctgttgttttcaacaagattttatataatggcaaccaaaattacaac
tctcaaactggcatcttcacttgcaaaatacctggaatttactactttgtctaccatgtt
aattgcaaaggaaacaatgtatgggtggcattgtacaggaacaatgagccagttatgtat
acatatgatgaatacaaaaaaagttacttggatcaggcatcaggtagtgcagtgctgccc
ttacaagttggagacactgttcatatccaattaccatcagacaaagctgcaggactttat
gctggtccatatgtccactcatcattctctggatatttgttatatcccatgtga
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