Carassius auratus (goldfish): 113040054
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Entry
113040054 CDS
T07313
Name
(RefSeq) cartilage intermediate layer protein 1-like
KO
K24436
cartilage intermediate layer protein
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113040054
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
113040054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
I-set
CarbopepD_reg_2
Ig_2
TSP1_spondin
ig
TSP1_ADAMTS
Ig_5
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
113040054
NCBI-ProteinID:
XP_026054067
Ensembl:
ENSCARG00000005932
UniProt:
A0A6P6J879
LinkDB
All DBs
Position
22:complement(22903827..22920281)
Genome browser
AA seq
1265 aa
AA seq
DB search
MHLAISGCGTMWDFTVGTLALSTVFVVSLAQGPIWDSSHLQRLNKTDRNRKLAYNSLVDP
KTTGVTEWTSWFNIDHPGGNGDYERLEAIRFYYRERVCSRPVAIEARTTDWVAAADTGEV
VHSSLEKGFWCINKEQPFGRICSNYHVRFQCPPVHSYWTDWNEWTPCSATACNDVGIQVR
QRKCMSTQPLPLLLSPVCVGPHIERRECSTPPCEAVWSQWGLWSACSVTCGKGRRTRRRT
CHRSSTKIQCTGRPVEVQKCGNPCPVACKRVCPGGRPSKDCSYCICDGQILHGEVFSVTG
VPVPNATVALASQAKVVRAHTDAKGQFKIDGLCTSPQTRVVIEKDKFAPVTLPVSNNSTD
ELWVRAILRSSEKPYIEKHPEDKVRYEGQRATLCCRATGSPKPDKYYWYHNGTLLNRTIY
KYDEDLILRDLKPEQSGQYHCKATSLTGSIKSTSAVLTVFAKGTPACNSTPENHLIKLPL
DCKQPGTDSKFYNAGRCPHNKCPGSLDFDMRCRDGSGFCCGVKQMNARKINCGRYTLPIK
VVSECGCQTCVEPKILVRGRVVSADNDEPLRFGHIYIGKERIGTTGYQGGFTIQVSPDTQ
RLVVNFVDPSQKFIDTIKVFIFDKRGGSVYHDVKVMRKQEPVDINAAESNTIYLGEIKDE
DPIGQLVIPPNSFHKNTGEVYEGTVKASVTFLDPRNITMAAAAPGDLNFVDNEGDMLPLR
TYGMFSVDFRDGANQEVLGTGAVQVLLDTEHVKMQEHIPAMKLWSLNPDTGIWEEESNFQ
PTQTTVAGTGRNKREERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLPNEQL
EGVVINLINLEPKPGYSSNPRAWGRFDSVITGPNGACLPAFCDAQRADAYTAYVTAIMGG
EELEAAPSMPKMNPNIIGVSQPYLGKLDYQRSDHEDPALKKTAFRINLSKPNPNNFDETN
GPIYPYQSLIACENAPVDANHFRFFRVEKDKYEYNVVPFEESDLTSWTGDYLSWWPNPQE
FRACYIKVKIHGATEIMVRSRNMGGTHPQTRGQLYGIRDIRSTRDLHHPNTSAACLEFKC
SGMLFDQGIVDRSLISVIPQGNCRRLGINGLLQEYLIKHPPVLQNNESHAFNMLAPVDPL
GHNYGIYTVTDQNPRVAKEIAIGRCFDGTSDGFSREMKSDSGVALTFSCPKRTVNRESLF
QRLQTNPGLTLTQMAREMRESQGLQVRRGSTQMVAYPFGQQGRSQNRGATNNNRRRPATR
TEPRQ
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcatctggccatcagtggctgtggcactatgtgggacttcacagtcgggacgttggcg
ctgtctaccgtctttgtagtgtctctggcacaaggacccatctgggacagctcacatctt
cagaggttaaacaaaaccgacaggaacagaaagctggcttacaacagcctcgtggatcca
aagaccacaggtgtaaccgagtggacatcctggttcaatatcgaccatccaggaggaaac
ggtgactacgagaggctagaagccatccgcttctactaccgagaaagggtctgctcacga
cctgtagccatcgaggcccgtaccacggactgggttgcagccgcggacacgggggaggtg
gtccattccagtctggaaaaaggcttctggtgtatcaataaggagcagccatttggtcgc
atctgttccaactaccatgtgcgattccagtgtccaccagtccactcatactggactgac
tggaatgaatggacgccttgctctgccactgcctgtaacgatgttggcatccaagtccgt
cagaggaaatgcatgagcacacaacctcttccactgcttctttcgcctgtttgtgtggga
ccccacattgaacgaagagagtgttcaaccccgccatgcgaagctgtgtggagccaatgg
ggtttgtggagtgcttgctcagtgacctgcggtaaaggccgcagaacaagacgtaggaca
tgtcacagatcttctactaagattcagtgtacaggacgacctgtagaggtccaaaaatgt
ggaaatccatgtccagtggcatgcaaacgtgtctgtcctgggggacgtcccagtaaggac
tgtagctactgtatctgtgatggacaaatactacatggggaggtcttcagtgttacaggt
gtccctgtgccaaatgcaacagtggctctggctagccaagccaaggttgtccgcgcccac
actgatgccaagggccagttcaagattgatggactgtgcaccagcccacagacccgagtg
gtcatagaaaaggataaatttgcacccgtcactctccctgtttccaacaatagcactgat
gaactctgggtacgggccatcttacgatcctcagaaaagccgtatattgagaagcaccca
gaagacaaagtgcgttatgagggacaacgtgcaaccctttgctgtagagccacaggatcg
ccaaaacctgacaaatattactggtatcacaacggaaccttactgaatcgcacaatatac
aagtatgatgaagatctgattttgcgagacctgaaaccagagcagtcagggcaatatcac
tgcaaagcaactagtctgacaggcagcataaagtctacttcagctgtcctcactgttttc
gccaaaggaacaccagcatgcaactcgacacctgaaaatcacctgataaaattgccatta
gactgcaagcagcctggaacagactccaagttttacaatgcaggtcgttgtccacacaac
aaatgccccggatcgctggactttgacatgcgttgcagggatggatctggcttctgctgt
ggggtcaaacaaatgaacgctagaaagatcaactgtggccgttacaccctgccaatcaaa
gtcgttagtgagtgtggctgccagacttgtgtggagcccaaaattcttgtacggggaagg
gtggtgtcagcagacaatgatgaacccctgcgctttggacatatttacatagggaaggaa
cggataggtaccacaggatatcagggtgggttcacaatccaggtgtctccagatacacag
cgtcttgttgtaaactttgttgacccttctcagaagttcattgatacaatcaaggttttt
atctttgacaagagaggaggttctgtctatcatgatgtaaaagtgatgaggaagcaggaa
cctgttgatataaacgctgcagaaagcaataccatttacctaggtgaaataaaagatgag
gaccctattggtcaactggtcatacctccaaactctttccataaaaacacaggggaagtg
tacgaagggactgttaaggccagcgtcacgttccttgaccctcgcaatattactatggct
gctgccgctcctggcgatctcaactttgtagacaatgaaggagacatgctacctcttagg
acatatggaatgttttcagtagatttccgagatggagcaaaccaggaggttctaggaact
ggtgctgtccaggttctccttgatacagagcatgtaaaaatgcaggagcacatccctgct
atgaaactctggtccctcaatcccgatactggcatttgggaggaggagagtaactttcaa
cccacacaaactactgttgctggcaccgggaggaacaaacgagaggagcgcaccttcctg
atagggaatatggaaatcagggagcgtagattgttcaatctcgatgtacctgagaatcgc
cgttgctatgtcaaagtgagggcgtacatgagtgacaagttcctgcccaacgagcaacta
gaaggagtggtaataaacttgataaacctggagcctaagccaggctactcgtcaaatccg
agggcttggggacgctttgatagtgtgataacgggaccaaacggtgcttgtcttccagct
ttctgtgatgctcagagggctgacgcatacacggcttacgtcacagctataatgggaggt
gaggaactggaagcagccccctcaatgccaaaaatgaatccaaacattattggtgtgtct
cagccgtacttagggaagttagattaccagcgctccgatcatgaggatccagcacttaag
aaaacagcttttcgaatcaacctatccaaaccaaaccctaacaattttgatgaaacgaac
ggaccaatctatccttatcagagtttaattgcatgtgaaaatgcacctgttgatgccaac
cactttcgtttcttccgtgtcgagaaagataaatatgagtacaatgtggtaccctttgag
gagagtgacctcacgtcttggactggagattatctttcctggtggccaaatccacaagag
ttcagggcttgctacatcaaagttaagattcatggagctacagaaatcatggtacggtca
agaaacatgggtggcactcatcctcagacaagaggtcagttgtatggcattagagacatt
cgtagtacccgtgacttacaccatcctaatacctctgctgcttgtcttgagttcaagtgc
agcgggatgctctttgatcaaggtattgtagataggtcactaatttctgtcatcccacaa
gggaactgtcgtcgtctaggcatcaatggtctcctccaagagtatctgataaagcatccc
cctgttcttcagaacaatgaatctcatgctttcaatatgttagctcctgtcgatccactt
ggacacaattatggaatatacactgtcactgaccagaacccacgcgttgctaaagagatt
gccattggccgctgctttgatggaacttcagatggtttttccagggagatgaagtcagat
tctggagtggcactgacgttcagctgccctaaaagaactgtgaatcgtgagagcttattc
cagcgcttgcaaacaaatcctggcctaacactaacacagatggcacgggagatgagggag
tcacagggactgcaagtcagaagagggtcaacccaaatggtggcctacccttttggccag
cagggcaggagccagaaccgcggagccacgaacaataacagaaggagaccagctacaagg
acagaaccaagacagtag
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integrated database retrieval system
