Carassius auratus (goldfish): 113040137 Help Entry 113040137         CDS       T07313                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism caua  Carassius auratus (goldfish) Brite KEGG Orthology (KO) [BR:caua00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:caua03000]     113040137    04121 Ubiquitin system [BR:caua04121]     113040137 Transcription factors [BR:caua03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     113040137 Ubiquitin system [BR:caua04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     113040137 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 Prok-RING_4 zf-CCCH zf-C3HC4 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Baculo_IE-1 FYVE Ribosomal_S4 zf-RING_4 zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  113040137 NCBI-ProteinID:  XP_026054196 Ensembl:  ENSCARG00000006724 UniProt:  A0A6P6J2C2 LinkDB All DBs Position 22:complement(25033428..25064951) Genome browser AA seq 1081 aa AA seqDB search MPVQAPQWTEFLLCPICTQTFEESHRKPISLGCGHTVCKMCLNKLHRKACPFDQTNISTD IEQLPVNTALLQLVSGQVPKAPPVTLLTAAEDVKHYEESRTCVEDLALYLKPLSNIRGAG LNGAAQSLLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL ADIDPSPDAPAPTWEQLAKGLEAVRTVVHGLVDFIQNHSKKGGDQQQPPQHSKYKTYMCR DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLGMRRQLSQSLTQLNEMDLGSGLLTDDG LLMEGLPRKHSSITNVILAAGPDSTLAHLVSRGSDPSYDPTHKPGNSGSLSAPGSPPDSL ESIPKAGMLINSHSRVTGEGAVGQKHMPAVPRGPHMYSPHPSERYYSDPRVPVPPSAQYE SSQYPAGNPYPHHHVHTRYARNPTPDPGMSSYPDSYSSSYSSELQCANASSHYGYPSHHD GRRHSAYTHPQTLPPREVVRRSPDVPPPLPPQNASYLSEPDNYNHSSHMRSYPRSAYTRP QPSLDYLHRRRQEIMAQLEERKLASPSPFSASHTYDPSYPQDTRGQSHYMEDNSHSFGHF REPDYTSSYSPWSCDTFGSYIGSKDIKSKEGMNSMDTQNIDKGKNLRAHGLELQRRAADG KDDDPIIPFGSLPTVSRFGAISRTSKPGYPPNSPMPPMPNSAKHSASAADYTYAKQGGWS GDSYQPHQTSQGHFRERTSSSPAVQAREQLKMELQKVNLQISQQTQSRGLENPSSVMSQP SRGDLSSSGQVSLELHQVESDIFMKKQEMAMENHNGKYKRVSLENGQDEHTLQRDEHPVT LSSSHGGSLSDCSEGSNGSIQDCDLVSSSMSSLTSKTSSLSLSSEQVASSPDLPKNGVDH S NT seq 3246 nt NT seq  +upstreamnt  +downstreamnt atgcccgtgcaagccccgcaatggaccgagtttctgttgtgtcccatctgcacacagacc ttcgaagagagccaccgcaagcccatcagcctgggatgcggccacactgtgtgcaaaatg tgcctaaacaaactgcaccgcaaagcctgcccgttcgaccagaccaacatcagcacggac atcgagcaactgcccgtcaacacagcgctgctgcagctcgtcagcggacaggtacccaaa gctccccccgtcactttactgacagctgcagaggacgtcaagcactatgaggagtcccgc acatgtgtggaggacctggccctctatctcaaacccctgagcaacatcagaggtgcaggg ctgaatggcgccgctcagagccttctcagcagacctatgcagaggaagctggtgactctg gttcactgccagctggtggaggaggagggccgcatccgggccatgcgggccgcccgctct ctgggtgaacgcactgtcactgagctcatcctccagcaccagaacccccagcagctctcc tccaacctgtgggccgccgtcagagccagaggctgccagtttctcggccctgctatgcag gaagaagcactgaagctggtcctgctcgctctggaagatggttcggccctctcacggaag gttctagtcctgtttgtggtccagagactcgaaccacgttttcctcaggcctcgaaaaca agcataggacacgtggtgcagctcctctacagggcctcctgctttaaggtgaccaaacgt gatgaagattcctccttgatgcagctgaaggaggagtttcgcacatacgaggctctccgg agggaacatgactctcagatcgttcagatcgcgatggagggcggcctgcgtatcgccccg gaccagtggtcatctctgctgtacggcgaccagtcgcacaaatcccacatgcagtccatc atagacaagctgcagacaccagcatcctttgctcagagtgtgcaagaactcaccattgcc cttcagagaaccggcgatccagccaatctcaaccgcctcagaccccatctggagctcctg gccgacatcgaccccagcccagatgcccctgcacccacatgggagcagctagccaaaggg ctggaagcggtgcggaccgtcgttcacggcctggtggacttcatccagaaccacagcaaa aaaggaggggatcagcagcagccgcctcagcacagcaaatacaagacctacatgtgtcgg gacatgaaacaaaaaggcggctgtcctcgcggagcaagttgcactttcgctcactctcag gaagagcttgaaaagtaccgtaagatgaataaacgtttgggaatgaggcgacagctcagc cagtccctgacccagctgaacgagatggacctcggctccggtctgttaactgacgatggg ctgctgatggagggactcccacgcaaacactcctccatcactaacgtcatcctagcagca ggacctgattccacactagcccaccttgtttccagaggctcggacccgtcatatgaccca acacacaaaccagggaactctgggagcctcagtgcacctggctcccctccagactcattg gaatccatcccaaaagcagggatgctcataaactctcactccagggtaacgggtgaaggt gcagtcggacagaagcacatgcctgcggtgcctagaggtcctcacatgtactcaccacac ccgtctgaacggtattactctgacccaagagtccctgtgccaccctctgcccaatatgaa tcctcccagtaccctgcaggtaatccttatcctcaccaccatgtgcacacacgttacgct cgcaatccgactccagatccaggaatgtcatcatatccggactcctattccagctcctat tcttcagagctccagtgcgccaacgctagctcccattacggatacccttcacaccatgac ggccgtcgccactcagcctacacccatcctcagacattgcccccacgggaggtggtgcgg aggagtccggacgttcccccgccgctaccaccccaaaacgcttcgtacctgtcagagcca gacaactataaccactccagtcacatgaggagttacccgaggagtgcctacacacgacct cagccgtccctggactacctgcaccgccgaagacaggagatcatggcccagctggaggag agaaagttggcttccccgtcaccattcagcgcctcacacacatacgaccccagctaccct caggacacgagggggcagagccattacatggaagacaactcccacagttttggacacttc cgggaaccggactacaccagctcgtattcgccttggtcatgtgacaccttcggttcctac attggcagcaaagatataaagtccaaggagggcatgaactccatggacacacaaaatata gacaaaggcaaaaatctgagagcacatggcttggagcttcagcgcagagcggcagacggc aaagacgacgaccccatcattccctttggctccctgcccaccgtgtctcgtttcggagcc atctcgcgcacgtctaaaccgggctacccgccaaacagtcccatgccacccatgccaaac tcagccaagcacagcgcttcagctgctgactacacctatgcgaagcaaggcgggtggagt ggtgactcctaccagccacaccaaacgtctcaggggcacttcagggagcgaaccagttca tcccctgctgtgcaggcgcgagagcagctgaagatggagctacagaaggtcaacctccaa atcagccaacagacacagagtcgcggcctagagaacccgagctcagtcatgtcccagccg tctcgaggggacttgtcgtccagtgggcaggtgagtctggagctgcaccaggtggagagc gatatcttcatgaagaaacaggagatggccatggagaaccacaatggcaagtacaagcgg gtctcattggaaaatggacaagacgaacacactctgcagcgagatgaacatccagtcact cttagtagttctcatggtggttctctctctgattgtagtgagggctcaaacggctccatc caggactgtgatctcgtcagcagcagcatgtcctcgctgaccagcaagacgtcctctctc agtttgtcctccgaacaggtggccagcagccctgatttgcccaagaacggagtcgaccac tcctag

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