KEGG   Carassius auratus (goldfish): 113040232
Entry
113040232         CDS       T07313                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03018  RNA degradation
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113040232
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113040232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113040232
   03041 Spliceosome [BR:caua03041]
    113040232
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113040232
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113040232
Spliceosome [BR:caua03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113040232
SSDB
Motif
Pfam: LSM InhA-like_MAM
Other DBs
NCBI-GeneID: 113040232
NCBI-ProteinID: XP_026054342
Ensembl: ENSCARG00000056947
UniProt: A0A6P6J910
LinkDB
Position
22:complement(27993183..27994729)
AA seq 103 aa
MADKDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggacaaagacaagaaaaagaaggagagtatttttgatttgtcgaagtacatcgac
aaacatatcagagtaaagttccaaggaggtcgtgaagcaagtggggtcttaaaaggcttc
gacccgctgttgaatctcgtgttggatggcaccattgaatacatgcgagatcctgatgat
cagtacaagctgactgaagacaccaggcagctcggtctggttgtatgtcgagggacgtcc
gtcgtgctgatctgtccacaggacgggatggaggccattccgaaccctttcattcaacag
caggatggataa

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