Carassius auratus (goldfish): 113040251
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Entry
113040251 CDS
T07313
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04144
Endocytosis
caua04517
IgSF CAM signaling
caua04520
Adherens junction
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113040251
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113040251
09144 Cellular community - eukaryotes
04520 Adherens junction
113040251
04530 Tight junction
113040251
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113040251
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113040251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
113040251
NCBI-ProteinID:
XP_026054374
Ensembl:
ENSCARG00000003637
UniProt:
A0A6P6J2T3
LinkDB
All DBs
Position
2:5973180..6035116
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AA seq
1168 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHSLVQQAAMRYRRAIAKDEEYWVQVYRLEHGDGGILD
LDDVLCDVADDKDRLVAVYDEQEPHVGGDGTSASSTGTQSPELFSGEPSTSTPLSAFQPY
LPHSEIEVTTSTLRTNMPLHVRRSSDPALLNLTAMSFSEPGSQPEEPSRKNPTRWSTTAG
FLKPRFSSGTNSLERKGRGVDTYRSLPRDAGQWSNQKEFQREKARSSLSANHPMVDRWLE
RQEQDEEENGRIEPVGRADICLEHMGVRSLNDIVKLVEVSNDGGPLGIHVVPFSGRDRRT
LGLLVKRLEHGGKADVQGLFQENDCIIQINNGDLRNVRFEQAQNMFRQAMHSPVILFHVV
PTTMRSLYEQISHNEHNPRVNIDLSGRFSPDSLTNDPVGLDHAAHRLAQHMPHPPNNHLD
TSSPIRHPVGSSGKPPSGHSSSPQRGLSPAPTTGFTKKVGRRLGIQLRKGPEGLGFSITS
RDVPLGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRGQEEVVSLLRATPMG
GTVSLLVMRQEESFLPREMNTEPAMQNTREWKVEDEELVLTPDGTREFLTLEVPLSDSGS
AGLGVSVKGNRSKESHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQDA
METLRKSMSTEGNKRGMIQLIVARRINKRLEGESRCSPRGLERTLSPSPDDHERRISHSL
YGIEGLDDNLRPHANTSPHKMNHYQLSPTVNMPQDDTVIIEDDGPHVLPAQLSDQSSSSS
HEDMGFAVETPPPPPWNQELPDSSSSANDEGAFQREGFGRQSMSEKRTKQYGDASQLDII
KTRKSKSMDLVADEINLTHYTENHPGSSSHDVGPSLGLKKSSSLESLQTAVAEVTLNGDM
PFHRPRPRIIRGRGCNESFRAAIDKSYDRPAANEDEEECMDTLEEDNEGSSRSGRDSVST
VADLTPLPVTEQQLINGSQPQNDKKKEKGGKDKKKPEKEKGKTKKGMLKGLGEMFRFGKN
RKDERMDGPKWKAEETHASEEETRRMRQEQERIQAKTREIRQRQARERDYAEIQDFSRST
LTSLPPEEPSYAGIGSLEHSGYHRIHTPPDSPYTHKQIAHNGHPSTSDRLTLSNHDRIQR
LRQEFQQVRQEETEPDDRHRAYSLEQHW
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaagaactcgggtcgtggttccgtgcggagatggcaac
attaaagtgcactcgctcgtccagcaggccgcgatgcggtacaggagagcgatcgccaag
gatgaagagtactgggttcaggtgtaccggctggaacacggcgatggaggaattcttgac
ctggatgatgttctgtgtgatgtggccgatgacaaagacagattggtggcggtgtatgat
gaacaggagcctcatgttggaggtgacggcaccagcgcgagctccacaggcacacagtcg
ccggagctcttctctggagagccgtccacctccaccccactgtctgccttccagccgtac
ctgccccacagcgagatagaggtcaccacatccacgcttcgaaccaacatgcctttgcat
gtccgtcgcagtagtgatccggcattgttgaacctgacagcgatgtcattctctgagcct
ggttcgcaacctgaagaaccttccagaaaaaatcctacacgctggtccacaaccgccggc
ttcctgaaaccacgtttctcttccggcaccaacagtctggagaggaagggccgaggtgtc
gacacatatcgtagtcttcctcgtgatgcagggcagtggtccaatcagaaagagtttcag
cgtgagaaggcccgttcctcactcagcgccaatcatcccatggtggaccgctggctggag
cgacaggaacaggatgaggaggaaaacggtaggatagagccagtgggacgtgcggatata
tgtttagagcacatgggagtgagatcgctcaatgatattgtgaaattggtggaagtgtcc
aatgacggaggtccactcggtatccatgttgtgcctttcagtggacgagaccgcaggaca
ttgggtctgctggtgaagcgtttggagcatggagggaaggctgacgtccagggtttgttt
caggaaaatgactgcatcattcagatcaacaatggagatctgcggaatgtccgatttgag
caagctcagaacatgtttcgtcaggcaatgcattctcccgtcatcttgttccatgtggtg
ccgaccaccatgagatccctgtatgagcagatatcccataatgaacacaaccccagagtg
aacattgacctttctggacgtttcagccctgactccctcacaaatgacccggtcggcctg
gatcacgctgctcaccgattggcccagcacatgccacacccaccaaataaccatttggat
accagctctcccatccgtcatcctgttggctcatcagggaaacctccatcaggtcactcc
tcctctccccaaagaggattaagccccgcccccacaactggctttaccaagaaggttggg
cggagacttggaatccagcttagaaaagggcctgaaggtctggggttcagcatcacatca
agggacgtccctcttggaggctccgcccctatttacgtgaagaacattctgccaagagga
gctgccatacaggacgggagactgaaagcaggggatagattgctagaggtcaatggggtg
gatcttaatgggcgtggtcaggaggaggtggtttctctgctgagggcgacgcccatgggt
gggactgtgagtcttctggtaatgagacaggaagagtcctttctacccagagagatgaac
acagaaccagcaatgcagaacacacgagaatggaaggtagaagatgaggagttggtccta
acacctgacgggacacgtgagttcctgacgttggaagtgcctctgagtgattctggctcg
gcgggtttaggagtcagtgtcaagggtaataggtcaaaggagagccatgctgacctgggc
atctttgtcaagtctattatcaatggaggagcagcatgcaaggatggaaggctgcgagtc
aacgatcagctaatcgcagtcaatggagagtcgttgttagggaagacaaaccaggacgcc
atggaaacactgcgcaagtccatgtcaacggagggcaacaagcgagggatgattcagctg
attgtggcaagacgaatcaacaaacgccttgagggggagagccgatgcagtccccgaggt
ttagagcggaccctgagcccgtctcctgatgaccacgagcgacggatctcacactcgctg
tacggaatcgaggggcttgatgacaaccttaggccacatgccaacacaagtcctcataaa
atgaatcattatcagctctcgccgacggtcaacatgcctcaggatgacacagtcattatt
gaagacgacgggccacatgttctccccgcccagctgtctgaccaatcgtcatccagttct
cacgaagacatgggtttcgctgtggagactccgccaccaccaccctggaaccaagaactt
ccagacagctcttccagtgctaatgatgagggggcgtttcagagggaaggctttggcagg
caaagcatgtctgaaaaacgcaccaagcagtatggagacgcaagccaactcgatatcatc
aagacccgcaagtccaagagcatggacctagtggctgatgagattaacctcacacactac
acagaaaaccacccaggctcttcctcacatgatgttggcccgtctctcggcctaaagaag
tccagctctctggaaagtttacagactgccgtcgctgaggtgactctcaacggcgacatg
ccttttcaccggccacgcccacgcatcatacgggggcggggctgcaacgagagcttccga
gccgcaattgacaaatcgtacgacaggccagcagcaaatgaggatgaagaggagtgcatg
gacacattggaggaggacaatgaaggaagctctcgatcagggcgggattccgtttccacg
gtagctgatctcactccgcttcccgtcaccgagcaacagcttatcaatggcagtcagcct
caaaacgacaagaagaaagaaaaaggggggaaggacaaaaagaagccagagaaagagaag
ggtaaaacaaagaaaggaatgctcaagggtcttggagagatgttcaggttcgggaagaac
cgtaaggacgagcgtatggatggtccaaagtggaaggcagaggaaactcatgcatcggag
gaagagacgcgcagaatgagacaagaacaagagaggatccaggctaaaacacgagagatt
cgtcagcgccaggccagagagagagactatgctgagatccaggacttcagtcggtccacc
ctgacctcactccctcctgaggagccctcgtacgctggcatcggctcgctggaacacagc
gggtatcatcggatccacacgcctccggactcaccatacacacataaacagatcgcccac
aacggacacccctctacatcagacaggctgacactcagcaaccacgaccgaatccagcgc
ttacgccaggagttccagcaggtcaggcaggaagagacggagccagatgatcgccaccgt
gcctacagcttggagcagcactggtga
DBGET
integrated database retrieval system
