Carassius auratus (goldfish): 113040635
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Entry
113040635 CDS
T07313
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113040635
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113040635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
DUF3447
Motif
Other DBs
NCBI-GeneID:
113040635
NCBI-ProteinID:
XP_026054710
Ensembl:
ENSCARG00000066681
UniProt:
A0A6P6J3E6
LinkDB
All DBs
Position
2:complement(16166807..16174713)
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AA seq
1121 aa
AA seq
DB search
MTKESAEMTNISKAESKSRQQSFDSAMDGDESNQMSVNVLEWTKQGNVVALEKHTRYLDI
RDNTGASPMHYAASMGHFRIIRLIVQITGQQELNARDEEGNTPLHWAVQKDQPGSCSLLL
TLGADPNILNNSQQSPLHMAVSMGKNFVLEQLVSHKQTDVNLEGDMGNTPVILAASLDNH
EALVILYKHGAKFCRQNKLGHFAIHAAAFAGAKKSMEVILLKGEEVGLSIDTHVNYVDKS
CSSPLHLAVRGGNLDIIKLCIAYGAKIDQQQCDKSTALHFACSQGAIEVVKVMLSAYHKV
CDLINITDGANQTPLHKAAIFDHFELSEYLISQGADIDFVDCKGHSPLLLATSCGAWRTV
NLLLSHGADLKKKDKSGCNFLHLAILQPRGLKNLPTEVLQHESVRELLNDEDTEGCTPLH
YACRLGIPESVKNMLGLEVSLDQKSKQKKSALHFAAEYGRINTCHRLLEMVTDTRLLNEG
DEKGLTPLHLASRGGHVKVVELLLRKGALFHSDYRGWSCLHHAASEGYTQTMDTLLTSNI
KLLNKTDGDGNTALHLAARAGHVATVRLLLYRGAKILLNKNDASFLHEAVHNGRKEVTNT
VIESDRCVEAMTTYKPNSSKRCIVMDMIEFLPDSFKHLLDSCIKESEEDVNSTNYYIEYN
FRWLQHPLQNLKKTGMKKDNTYKPLSALNAMVNFNRVSLLTHPVCKKYLEMKWNAYGIKA
HLLNMTVYALGVFPLTYLIVNLKPTLVTARNVTSVNMVCTSLYKQSYVITACMFLVLAMN
MYAVGKEILQIIQQRVNYLQDLSNYMDWGAAICSLVFVVPLLLNVKSSWHWQAGVLAALA
SWMNLLLYLQRFERIGIYVVMFREISRTLLSIILLFFYLILGFALAFYALMIEQQHFGRI
FLSLLQTFVMMVGEINYQDNFLKPFLQGDLPFPLLTLAIFVWFVLLVPILLMNLLIGLAV
GDIAEVQTNACLKRIAMQIELHTNLEERLPYWFMKRVDQVTVREFPNKCFSGKKRWFFCG
NEVRKSRTRLSPTISQLTPLERELTKQKYRMREMSDSMEKQHNLLKLIVQKMEISSEAEE
HDGPPVFQELREKLLSRSKWGPLLRAVTARKKGVCKFMKTS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaagtgcagaaatgacaaacatctccaaagctgagtcgaaatctagacaa
cagtcattcgatagtgcaatggatggagacgagagcaaccagatgtctgtaaatgtattg
gagtggactaagcaaggaaatgtagtcgctctggagaagcacaccaggtacctggacata
cgagacaacaccggtgccagcccaatgcactacgctgcatccatgggacactttcgcatc
atcagactaatagtgcagatcactggacagcaagagctcaatgccagggatgaggagggg
aacacacctcttcattgggctgtgcagaaggaccagccaggaagctgctctctgcttctg
actctgggagcagatcctaacatcctaaacaacagccaacagtcaccgttacatatggca
gtcagcatgggtaaaaatttcgtgttagagcaacttgtctcgcataaacaaaccgatgtg
aacctggaaggtgacatgggaaacacgcctgtcattttagctgcttctttggacaaccat
gaggctctggtcatactgtacaaacatggtgccaagttctgccgtcagaacaagctaggt
cattttgcgattcatgctgctgcttttgctggagctaagaaatccatggaggtcattctt
ctgaaaggagaagaagttggtctgtctattgacacccatgtgaactatgtggataaatct
tgcagtagtccacttcacctggctgtacgtggaggaaatcttgacatcattaaactctgc
attgcatatggagcgaaaattgaccagcagcagtgtgataaatccactgctctccacttt
gcatgtagtcaaggtgccattgaggttgttaaagtcatgctctcggcttatcataaagtg
tgcgatcttatcaacatcactgatggggccaaccagacacctctacataaagcagcgatt
tttgatcattttgaactctctgagtaccttatatcacagggtgccgacattgattttgtt
gactgcaaaggccattctccacttcttctggcaacaagttgcggagcatggagaactgtc
aatctgctcctctcccatggagctgatctgaagaaaaaagacaaatctggatgcaacttc
ttgcatctggccatcttgcagcccaggggtctgaaaaacctgcccacagaggtactgcag
cacgagagtgtgagagagcttctcaatgatgaggatactgagggctgtactcctctccat
tacgcctgcagactgggaataccagagtctgtgaagaacatgctggggttagaggtctca
ctggatcaaaagtccaaacagaagaaatctgcacttcattttgcggccgaatatgggagg
atcaacacatgccacaggcttttggagatggtgactgacaccagacttctgaatgagggg
gatgagaaaggactgaccccactgcatctggcatctcgcggaggtcacgtgaaagtagtc
gagcttctcctacgcaagggggcgctgtttcacagtgactatagaggatggtcatgcctt
catcatgctgcatctgaaggatacacacagaccatggacactttgttgacatctaacatc
aaacttctaaacaagactgatggagatgggaacacagctttgcatctggctgctagagca
ggtcatgtggcaacagtaagactgctgttatacagaggggccaagatcctccttaacaag
aatgatgcgtctttcttgcacgaggcagtacataacgggaggaaggaggtcaccaatact
gtgatcgagagtgacagatgtgtagaggcgatgacaacgtacaaaccaaactcatccaaa
cgttgcattgtcatggacatgattgagtttcttccagactcttttaaacatcttctagac
tcctgcataaaggaatcagaggaagatgttaacagcaccaattactacattgagtacaat
ttcaggtggcttcagcatccactgcaaaaccttaaaaagacaggcatgaaaaaagacaac
acctacaaacctctcagtgcactaaatgctatggtgaattttaaccgtgtcagtctgctg
acacatccggtctgcaagaaatatttggagatgaaatggaatgcctatgggatcaaagca
catctgctcaatatgacggtgtatgcgctgggggtgtttcctctaacgtatctcattgtg
aacctgaagcccacactggtcactgcaagaaatgtcacatcagtcaacatggtctgcacg
tccctgtacaagcaatcctatgtaatcacagcatgtatgttcctggttcttgcaatgaat
atgtatgcagttgggaaagagatcctgcaaataattcaacagcgggtgaattatttgcag
gatctgtctaactacatggactggggcgctgcgatctgttctctggtgttcgtggtgccg
ctgctgctgaacgtgaagagttcctggcactggcaggctggagtactggcagctctggcc
tcctggatgaatctcctcctctatctccagcggtttgaacggatcggtatttatgtggta
atgtttcgggagatctcacggacgctcctgagcattattttgctgttcttttacttgata
ttgggatttgcattggccttctatgccttgatgatcgaacagcaacatttcgggaggatt
ttcctgtcactgctgcagaccttcgtcatgatggtgggagaaatcaactaccaggacaat
ttcttgaaacccttcctgcaaggagaccttcctttcccccttttgacattggcaatcttc
gtttggtttgtcttacttgtgcccattcttctcatgaaccttctgattggtttggctgtc
ggtgacatagcagaggttcagacaaatgcatgtttgaagaggattgcaatgcagattgaa
cttcacactaatctagaagagaggcttccctattggtttatgaaacgggtggaccaggtc
accgtcagagaattcccaaacaaatgcttcagtggaaagaaaagatggtttttctgtggg
aatgaggtgaggaagtccaggacccgtctcagtcctacaatctcccagttaactccactg
gaacgggagctaaccaaacagaaatacaggatgagggagatgtcagattccatggaaaag
caacacaacctgctaaagcttatagtgcagaagatggagatcagctctgaggcagaggaa
catgacggacccccagtctttcaagaactgagagagaaactcctcagtaggagcaaatgg
ggtccactgctcagggcagtgaccgccagaaagaagggagtctgcaaattcatgaaaacg
tcatga
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