Carassius auratus (goldfish): 113041075
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Entry
113041075 CDS
T07313
Symbol
exosc10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113041075 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113041075 (exosc10)
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
113041075 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
113041075
NCBI-ProteinID:
XP_026055158
Ensembl:
ENSCARG00000007517
UniProt:
A0A6P6J6Y5
LinkDB
All DBs
Position
23:5317760..5326654
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AA seq
901 aa
AA seq
DB search
MAASSSSAAVVKQSDLSSPCEETEEESEFCPGFKDVDAFVKHGLGAVVSATKASAALPAA
GDEFDLYRSFPSFQQFCASQGDQLLHCMSQIMQYHGCRSHMRDRNRLTGLEDRFDLVVDS
NDAILEKVGILLDEASGVSRTQQPVMPAGYQPPKIVVSSWNRRGGERRDETFHLLHAKNI
QRPQLKFKEKVDNSNTPFVSKIFIKPNAVKPLPTYFANKHIRKERPEDLDVPAALADFIH
QQRTQEHVDDMFSHPYQYELDHLVMPESLKCKPDVQMYKPLAECSCQFINTLDELVALNE
KLAKVSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSQMYILNETFTDPAIV
KVFHGADSDIEWLQKDFGLYVVNMFDTHHAARCLNLGRNSLDHLLKVYCSVNSDKRYQLA
DWRIRPLPDEMLKYAQADTHYLLYVYDRVRTDLYDTGNGKPTLIQQVWDKSRDLSLKKYV
KPIFTEDSYMELYRKQKKSFNTQQLAAFRLLYAWRDKLGREEDESTGYILPNHMMMKIAD
ELPKEPQGIIACCNPTPPLVRQQINELHQLLKQARETPLLKAEVLAEKRKSMTPKRKPQT
ILFGPHDTSRSSESDFLDLSSFETPTKPGVLFSEEEDESMNQEEKALHGLIASAKISLFA
KDDEEEAAPAHLTVAQQKAHSIMGSFENPFRMYLPSKDIHISKNAKYDPSSKIYEIHNRW
KLQSIEQQQKEAQEKQQAKEQAKKAQEERKKAKLSYQESLQNVHTVREQVAEAKQAGQKR
ERAASDAGEESLKPKMKVSKTASETPVADQSTKPAQKKKKQKKAQEPEVPEQDFKPFDYS
QSSFKVFDGKSKESSQFDPNRQARGPKQKKKGPKKNAVGGRSMSYVPDKSDRGFRHNWPK
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctcgagtagtgctgccgttgttaaacagagtgatctttcttcaccatgt
gaagaaacagaggaggaatcggagttttgtccgggttttaaggatgtcgatgcatttgtc
aagcacggtctgggagcggtggtctctgccacgaaagcgtctgcagctcttccagcagcc
ggagatgagtttgatctgtaccgcagcttcccttccttccagcagttctgcgcctcacag
ggagaccagctcttacactgtatgagtcagatcatgcagtatcatggctgtcggtctcac
atgagagacaggaacagactgaccgggctggaggacaggtttgacctggtggtggactca
aacgatgccatccttgagaaagtgggcatcctcctggacgaggcgtccggtgtgagccgc
acacagcagccggtgatgcctgcaggatatcagccgccaaagatcgtggtgtccagctgg
aaccgcaggggaggagagcgcagggatgagacctttcaccttctacatgctaaaaacatt
cagcggccgcagctcaagttcaaggagaaagtggacaacagcaacactccatttgtctcc
aaaattttcatcaaacccaatgcagttaagcctctgcccacatattttgccaacaaacac
atccgtaaggagcgaccggaggatctggacgttcctgctgcgctggctgatttcatccat
cagcagagaactcaggagcatgtggacgacatgttttctcacccttatcaatatgaattg
gatcatctggtcatgccggagagtctgaagtgtaaacctgacgtccagatgtataaacct
cttgccgagtgctcttgtcagttcatcaacactttagatgagctcgtcgctctgaatgag
aagctagccaaggtgtcggagttcgctgtggacctggagcatcactcctacagaagcttt
ctgggaatcacgtgtctgatgcagatatccacacgagaggaggatttcatcatagacacg
ctggagctgcgcagtcaaatgtacatcttaaacgagactttcaccgaccctgccatcgtg
aaggtgtttcacggggccgactctgacatcgagtggctacagaaggactttggtctttat
gtggtcaacatgttcgacacccatcatgctgcacgctgcctaaacctcggccgaaactcc
ctcgaccatctcctgaaagtctactgcagtgtgaactctgataaacgctaccagctggca
gactggaggatacgaccgttgccggatgagatgttgaagtacgctcaggcagacactcac
tatctgctgtacgtgtacgatcgagtccggactgacctgtatgatacaggcaacggcaaa
cccaccctcattcagcaagtctgggataaaagcagagacctgtcgctcaagaaatacgtg
aagcctatttttacggaggactcgtacatggagctgtaccgcaagcagaagaagagcttc
aacacacagcagctggcggccttcagactgctgtacgcctggagagataaactgggacgg
gaggaggatgagagcactggatatatcttacccaaccacatgatgatgaagatcgccgat
gagcttccaaaggagcctcagggcatcatcgcgtgctgtaaccccactccacctctagta
cgccagcagatcaatgagcttcatcagctgctcaaacaggctcgagagacccctttactc
aaggcagaggtacttgctgaaaagaggaaatcgatgacccctaaaagaaagccacagacg
attttattcggaccgcatgacacctcccgctcgtctgaaagtgatttcctggacctctcc
tctttcgaaactccaaccaaaccgggagtgctgttttcagaggaagaggatgaaagcatg
aaccaagaggaaaaggccttgcacggcctgatagcttcagcaaaaatcagcctcttcgcg
aaggacgatgaggaggaggcagctcctgctcatctgactgtggcacaacaaaaagctcac
agcatcatggggtcctttgagaaccccttcagaatgtatttaccatcaaaggacattcac
atttccaagaatgccaagtatgacccctcttcaaagatttatgagattcataaccggtgg
aagttacagagtattgagcagcagcagaaggaggcgcaggagaaacagcaggcgaaagaa
caggccaagaaagctcaagaggaacgaaagaaagccaaactgagctaccaggagtcgctg
caaaatgttcacactgtccgggagcaagtagcggaagcaaagcaggctgggcagaaaaga
gagcgagctgccagtgatgctggtgaagagagtctcaaaccaaaaatgaaagtctcaaag
actgctagtgagacacctgtggccgatcagtcgacaaaacctgctcagaaaaaaaagaag
cagaaaaaagctcaagagccggaagttcccgaacaagactttaaaccttttgactacagc
cagtcaagttttaaagtatttgatggcaaatcaaaagagagttcacagtttgatccaaac
agacaagcacgtggacccaagcagaagaaaaaaggaccgaagaaaaacgctgtgggaggc
aggagcatgtcttatgtccctgacaaatctgacagagggtttcgtcacaactggcccaag
agataa
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