Carassius auratus (goldfish): 113041124
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Entry
113041124 CDS
T07313
Name
(RefSeq) protein SOGA1-like
KO
K27704
microtubule cross-linking factor
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113041124
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113041124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
113041124
NCBI-ProteinID:
XP_026055256
Ensembl:
ENSCARG00000015225
UniProt:
A0A6P6J516
LinkDB
All DBs
Position
23:6481231..6532389
Genome browser
AA seq
1778 aa
AA seq
DB search
MTKTKVDTGSPTHFVSSKEKRQKQKMESSIGEQEQPQPSQQQPAQPLQVTERKKIHRAPS
PARPKDVPGWSLTKIRGGIGTPTLSVKPGAIYLGGRVSRRSPVTGKETKTEKSKPTGKPA
LSAPGAQKSCVKSNKSGRRKVSDASIGSDDLSKDSGCAAGKLSPTDSSSELSDCASEENK
VSTDALSSDTETSSRGGIDGEKAPASGQTKSSVEKERLSLGMETAEGSVSLGDERSLTSV
DSRMPASTSLAFSDLTEELMDGMHEELVREIEELRSENDYLKDEMEELRSEMLEMRDMYM
EEDVYQLQELRQQLDQANKTCRILQYRLKKAERRSIRVAQTGQVDGELIQTLEQDVKVAK
DVSIRLHNELDAVEKKRSRLEQENEELRVKLQDLEVAKQVLQAEMEKARENLKKRGARPN
NKPDKKASPQPPEDSSDLKCQLHFAKEESALMCKKLTKMVKDNEAMREELAKYRSVYGDV
DASLTVEEVAESPHTREAEVKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKIQDS
PGGAGVMGGVGSQLLSTSENVMELQRHLQFVEEEADLLRRSLIEMEEQNKLLMNELNHYK
SELSAVTEIEPLSSTTLTSPTIIPDASEDGGSGLNEASHKELLVARLQIVELNGKVKKLQ
YENRVLLSNLQRCDLASNQGSTRPTLETDAEAGDSAECVPSQAHREGPVGDEQNDILEEK
NLKVSGTSHIHTAQCLSIKDLLAIRDQALLVTSAIQLLTSPDPSCISPDALYHKITTNES
AEPVLEKSQTQSSMLPLVEALHGRLQSLQAQLQALSERVDALGQTPERERVEGMSLMPQL
SEAEDPAANCPCPPDAQFNQNTTQQKPDSRDQPDCEVKVHPCKAEEESNSHKDSNKDEKS
DLKETNSDLLTEQVCELHALLSEAREKAQGAQEALSQERLARHDDTHKLSQLQEEHQKAL
LRCDFQLQSLSLQTRLQQKLWSQERNLLVQESQQLKESLLLISLKLRWLLKQWRLGKKLD
TESKDILEVNSVKDLRILLEEDGLSSHYGDNKMSAAEEQPLNPTPKEHSLAEKSCPQPGG
FSSTLSDLKVALQDLSAELREERQSSQELTQQFARAKASWEVERMELKSIITQLEGKMGK
ASVAVGEKESPDLKGALKKEREEHQHLLADSYAAVMDLTKQLQISEKNWSRERLELLEHF
NQERSQWEQRLREAQSKGTQALHDKTSEKEISADAATSGSGLQRTKSFSALSEFKCLLDT
SLFLPGHKVSGVPECNVPQHQTTAPASILARTDLSDLNRKNWKYLTNDSAMLEKGDQFKT
WDCPSTNSNSSFPGLELSKEYIQRSYTAPDKTGIRIYYSPPTVRRMERRPVKEKAKQDPQ
QGPSSRDTAMIDPSGQTAASAPLSTTSSSTYEQWFSSLSQQHRDLLEGRTGGSTPFHGLE
ISGNLSDDMKEMTNCVRQAIRSSSLERKCSKDTGSQTVGVSSTGTQTAQFVSIGLQTDGP
FPTARGLQGKAWSPRPSTSLSSARSRQISTSLEKVHSRIDRPCCSPKYGSPKLTRRVSTS
SSKLETSSTSSRDRSVWNLHNRSGSQSGSAWARSTTTRDSPVLSGLNDGLTSLFSVVEHS
GSVESLWKADPCSGRQAAGKPSYPSIGIGLGEAGAQKYGMVQEFLHNVCGRTVPADSMDE
PKPECLPGALIGTDNITKIVNKRFMKTQREEFVATGKDAMSSSSSTLEDSVCDCSSQTAT
SCFARHSRSITRHTHGQCKHRVQDSPMGTEERFDTSNE
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacaaaggttgacaccggttccccgacgcattttgtctcgtcgaaggagaag
aggcaaaagcagaaaatggagagcagcattggagaacaagagcagccgcagccgtcacaa
cagcagcccgcgcagccgctacaagttaccgagagaaagaaaatacaccgggcaccgtct
ccagcgagacccaaggatgtgcccgggtggtccctcacgaaaatccgcggcggtatcggc
acgccgacgctgagcgtgaaaccgggggccatatatttaggtggccgcgtgtccagacgg
agcccggttaccgggaaggagacaaaaacagagaagagtaaaccgaccggcaaacccgcg
ctgtccgcgcccggtgctcagaagagctgcgtgaagtccaataaaagcggtcggagaaaa
gtctcggacgccagcatcggatcggatgatttgagcaaggactccggctgcgctgcgggg
aaactctcccccaccgacagcagctccgagctctccgactgcgcctccgaggagaataaa
gtctccacagatgcgctgagcagcgacaccgagaccagcagccgcggggggatcgacgga
gagaaagcgccagcgagtggtcaaaccaagagcagcgtggagaaagagcgactctcgctg
gggatggagaccgcagaggggagcgtctctctcggcgacgagcgctcgctcacctcggtc
gacagcaggatgcccgccagcacgtccttggcgttctcggacctgactgaggaattaatg
gacggcatgcatgaggaactagtcagggaaatagaggaactcaggtcggagaatgattat
ttaaaggatgagatggaggagcttcgctctgagatgctggagatgagggacatgtacatg
gaggaagatgtgtatcagctccaggagctcagacagcagctggatcaggccaacaaaacc
tgccgcatcctgcagtaccgcctcaagaaggcagagagacgcagcatccgcgtggcccag
accggacaagtggacggggagcttatccaaacactggagcaagacgtcaaggtggccaaa
gacgtgtccatccgtctgcacaatgagctggacgctgtggagaagaagagatctcgtctg
gagcaggagaacgaggagctgagggtgaaactgcaggatctggaggtggccaagcaggtc
ctgcaagcggagatggagaaggccagagagaacttgaagaagagaggtgccagaccaaac
aacaaacctgataaaaaagcatcgcctcagcctccagaagacagttcagacctaaagtgc
cagcttcactttgccaaggaggagtcagctctcatgtgcaagaaactcaccaagatggtc
aaagacaacgaggcgatgagggaggaactggcaaagtatcgctctgtgtacggagatgtt
gatgcctcacttactgtcgaagaggtcgccgaatctcctcacacccgagaggctgaggtc
aaagtccacctgaaactggtggaagaggaggcaaaccttctaagccgacggatcgtggag
ttggaggtggaaaaccgcggccttcgtgctgaaatggatgatatgaagatccaagattcc
ccgggtggagctggcgtcatgggtggagtcggaagtcagctgctttccacgtctgagaat
gtgatggagctgcagcgccacctacagtttgtggaagaagaggcagatctgctgcggcgc
tccttgatagaaatggaagagcagaacaagctgttgatgaatgagctcaaccactacaag
tctgaactttctgctgtcactgaaatagagccgttgtcatccacaaccctcacttcacct
acgatcatccctgatgcttcggaagatggaggatctggtctaaacgaagccagccataaa
gaactacttgttgccaggctacagatcgtagagctgaacggcaaagtaaagaagctccag
tatgaaaaccgtgtgcttctgtccaaccttcaacgctgtgacttggcctccaaccaggga
tccacacgtccaacgctggagactgatgctgaagcaggggactcggctgagtgtgtcccc
agccaggcgcaccgcgaaggcccagttggtgatgagcagaatgatattctggaggagaag
aatctgaaagtttcaggaacaagtcacattcatactgctcagtgcctcagcataaaagac
cttctcgccatccgcgaccaggcactacttgttacctcagccattcagcttctgacatca
cccgacccctcctgtatctcaccagatgccctctatcataagattacgacaaacgagtct
gcagaaccagttctagagaagagccagacccagagctccatgctgcccctggtggaggcc
ctgcatggcagactgcagtcgctccaggctcagctacaggccctcagtgagagggtggat
gccctggggcagaccccggagagggagcgtgtggaagggatgtccctgatgccccagctg
tctgaggcagaagaccctgcagcaaattgcccatgccctccagatgctcagttcaaccag
aacacaacccaacaaaagcctgactctagagaccagccagactgtgaagtcaaagttcac
ccgtgcaaggcagaggaggagagcaacagccacaaagacagcaacaaagatgagaaatct
gacttaaaggaaacaaactctgatctgctgacagagcaggtttgcgagctgcacgctctg
ttgtctgaggcgagagagaaggctcagggagcacaggaagcactgtcacaggagagactg
gcacgccacgatgacacacataaactctctcagcttcaggaagagcatcagaaggctctc
ctccgctgtgacttccagctgcagagtctgagtctacagacgcgtctgcagcagaagctg
tggagtcaggagagaaacctcctggtgcaggagtcacagcagctcaaagagagcctgctc
ctcatcagcctcaagctgcgctggctcctcaaacagtggagactcggcaagaaactagac
accgaaagcaaggatatcctagaggttaatagtgtaaaagatcttcgtatcctgctcgag
gaagatggcctgtcttcccactatggagacaacaagatgtcagctgctgaggagcagcca
ctcaatcctacacccaaagagcacagcctggcagagaaaagctgtccacagcctggtgga
ttcagcagtactctgtcggacctgaaggtagcgctacaagacctgagcgctgagctgcgc
gaggagcgtcagagttcacaggagttaacgcagcagtttgcgcgtgctaaagcatcatgg
gaagtcgaacggatggaactcaagagtattatcactcagctggagggtaagatggggaag
gcatcggtggctgtgggcgaaaaggagtctccagacctcaagggggcactgaaaaaggag
cgagaggagcatcaacacctgttggcggactcttatgctgctgtgatggacctcaccaaa
caactacagatcagtgagaagaactggagccgagagcggctggagcttctggagcacttc
aaccaggaaagaagtcaatgggaacagcgtttacgagaagcccagagcaaaggcacacag
gctctgcatgataaaacatctgaaaaggaaatctcagcagatgcagccaccagtggttca
ggactgcaaaggaccaaatcattttctgccctctctgaatttaagtgtcttctggacact
agtctgttccttcctggtcacaaggtcagcggagtgccagagtgcaatgttccacagcat
caaactactgctcctgcctccattttggctcgtactgacttaagtgatctcaataggaag
aattggaagtacctgaccaatgattctgcaatgctggagaaaggtgaccagtttaagaca
tgggactgcccaagcaccaactctaacagcagcttccctggactggagttgagcaaggag
tacatccagagaagttacactgctccagataagacgggtattcgcatttattacagccct
ccaacagtgaggagaatggagaggaggccagtcaaagaaaaggccaagcaggatcctcag
caaggaccatcatctagagacacagccatgatagatccatcaggtcagactgctgcatct
gcacctttgtcgaccacttcctcatccacttatgagcagtggtttagctcactttcacag
cagcatagagacctacttgaaggacggacgggaggttctacaccattccacggactggaa
atttcaggcaaccttagtgatgacatgaaggagatgaccaactgtgtgcgacaggccatt
cgttccagttctctggagaggaagtgcagcaaagatacagggagccagacagttggtgtt
tcaagcacaggaacgcaaacagcacagtttgtcagcattggcctacaaaccgatggaccc
tttccaacagctagaggccttcaagggaaagcatggtctcctcgtccatccacctcactt
tcatctgcacgctcccgacagatctctacatctctagagaaagtccacagtcgcatagat
agaccatgttgctcaccgaaatatggctcacctaagcttacccgcagggtctccacctcc
tcctccaaactggagacgtcctcaacatcttcaagggatcgcagtgtatggaatcttcat
aatcgtagtggatctcagagcggttcggcctgggcacgttccaccaccacccgagacagc
ccagtgcttagtggcctcaatgatggcttgaccagtctcttcagtgtggtggaacactcc
ggaagtgttgaatcattatggaaagcagatccatgctctggaagacaagctgctgggaaa
ccttcctatcctagcataggtatcggactgggagaagcgggagctcagaagtatggcatg
gtccaggagtttctccacaatgtttgcggcaggactgtgccagcagactccatggatgaa
ccaaagcctgaatgcctacctggagccttgattggcacagacaacatcacgaagatcgtc
aataaaaggtttatgaaaacacaaagagaagagtttgtagccactggaaaggatgcaatg
agctcaagctctagtaccctggaggattcagtttgtgactgcagctcacaaactgccact
tcctgttttgcccgccactcgcgctccatcacacgacatacccatggccagtgcaaacat
cgagtgcaagattcacccatgggaactgaagaacgattcgataccagtaatgaatga
DBGET
integrated database retrieval system