Carassius auratus (goldfish): 113041131
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Entry
113041131 CDS
T07313
Name
(RefSeq) transcription factor Sox-18-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113041131
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113041131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113041131
NCBI-ProteinID:
XP_026055265
Ensembl:
ENSCARG00000017284
UniProt:
A0A6P6J4R8
LinkDB
All DBs
Position
23:complement(6753890..6757130)
Genome browser
AA seq
439 aa
AA seq
DB search
MNISESSCCQEASSQPSQVAERGTWGASSSTPGPDRGHGFDRSRTTELAPVPGSGTRTGS
RTGAEARTGSPDSTRPGALTLGSSDGKSGGESRIRRPMNAFMVWAKDERKRLAIQNPDLH
NAVLSKMLGQSWKALSTLDKRPFVEEAERLRLQHLQDHPNYKYRPRRKKQPKKMKRVEPG
LLLQGLAGGPGPGEAYSQHRHAHHLLPPLGHFRDLHHSGVSELESFGLPTPEMSPLDVLE
EGGGDSVFFPPHMQEDVGLGSWINYHQHPNHQTGHHPHHNSHNLQHSHPHLNQKSPLACL
PLQEKCLVVESTNPNGLYPNMSLPESSKAPHTPTPAGYYGQIYGSSQSQPAFTSHLGQLS
PPPETSAVAQVAPPSLDAVDQLGPSAEFWGEVDRIEFDQYLSVNRTRLSRNAPCEESSAL
ISALSDASSAVYYSACITG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatctgagtctagttgctgtcaagaggccagttctcagcccagccaggttgcg
gagcgtgggacatggggtgcctcttccagcactccgggccctgaccggggacatggtttt
gaccgcagccggaccacagagctggcaccggtgcctggctctggaacacggacggggtcc
cgaaccggagcagaggccaggacgggaagcccggactcaacccgccctggagctctgacc
ctgggctccagcgatggaaaatcagggggggagtcgaggatcaggaggccgatgaatgcc
ttcatggtgtgggctaaagacgagcgcaaacgtctggccatccagaacccagacctgcat
aacgccgtgctcagtaagatgctgggtcaatcctggaaggctctaagcacactagacaag
cgtccgtttgtggaggaagccgaacgactccgtttgcagcacctccaggatcacccgaac
tacaaataccgccctcgccgcaaaaaacagcccaagaagatgaaacgagtggaaccgggt
ttgctcctccaaggcctcgctggcggcccgggcccaggagaagcttactcgcaacatcgc
catgcccatcatctgctgcctcctctgggacacttccgagacctccaccactccggagtt
tcggagctggagagttttggcctgccaacgccggagatgtcaccattggacgtgttggag
gagggaggcggagattcagtgtttttcccccctcacatgcaggaagatgtgggtctgggt
tcgtggataaactaccaccaacatccaaaccatcaaactggccaccaccctcatcacaac
tcccataacctccagcattcccacccacacctcaaccagaagtctccgctggcctgcctc
ccgctgcaggagaaatgcctggttgtggagtccacgaaccctaacggtctctaccccaac
atgagcctccctgaatcctccaaggctcctcacactcccacacctgcaggctattacggt
cagatatacgggagcagtcagtcccagcccgccttcacctctcatctgggccagctgtct
ccaccgcccgagacctcggcagtcgctcaggtcgctccaccctctctggacgctgtggac
cagctgggaccctcggccgagttctggggcgaagtggacaggatcgagttcgaccaatac
ctgagtgtgaacaggactcgattgagtaggaacgccccttgcgaggagagcagcgctttg
atatcagccctgtccgacgccagcagcgccgtctactacagcgcatgcattacgggataa
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