KEGG   Carassius auratus (goldfish): 113041436
Entry
113041436         CDS       T07313                                 
Name
(RefSeq) TATA box-binding protein-like protein 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113041436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113041436
   03021 Transcription machinery [BR:caua03021]
    113041436
Transcription factors [BR:caua03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    113041436
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113041436
  RNA polymerase III system
    TFIIIB
     113041436
  RNA polymerase I system
    SL1/TIF-1B
     113041436
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 113041436
NCBI-ProteinID: XP_026055737
Ensembl: ENSCARG00000011184
UniProt: A0A6P6JDA8
LinkDB
Position
23
AA seq 191 aa
MEPSNDVALDIIVSNVVSVFRTRCHLNLRTIGLEGTNVIYKPEMGKVLMKLRKPRITASI
WSSGKIICTGATSEEEAKLGARRLARCLQKIGFKVRFSDFKVVNVLAVCSLPFQIRLIEF
TKNNRPIASYEPELHPAATYRIKNLRSTVQVFSTGNITVTGPNVQSVASAVEQIYPLLFE
CQKTVINHTHM
NT seq 576 nt   +upstreamnt  +downstreamnt
atggaacccagtaatgatgtggcgcttgatatcatcgttagcaatgtcgtatctgtcttc
agaaccaggtgccatctaaacctgcgtaccattggcctagaggggactaatgtcatctac
aaacctgaaatgggaaaagtcctgatgaagctgcggaagccacggatcactgcctctata
tggtcatcagggaaaattatttgcactggagcaacaagtgaggaagaagccaaactaggt
gctcggcggttggcccgctgcctgcagaagattggattcaaggtgaggttctcggacttt
aaggttgtcaatgtgttggcggtgtgctccttgccttttcaaatccgtctcattgagttc
actaagaataaccgaccaattgccagctatgaacccgagctccatcctgctgcgacatac
agaattaaaaacctcaggagtacagtgcaggtgttttccacaggcaatatcactgttaca
ggaccaaatgtgcagagcgtggcgtctgcggtggagcagatttatcctctgctgtttgag
tgtcagaaaacagtcataaaccacacacacatgtag

DBGET integrated database retrieval system