Carassius auratus (goldfish): 113041601
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Entry
113041601 CDS
T07313
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113041601
03015 mRNA surveillance pathway
113041601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113041601
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113041601
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113041601
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113041601
NCBI-ProteinID:
XP_026056012
Ensembl:
ENSCARG00000006775
UniProt:
A0A6P6JE04
LinkDB
All DBs
Position
23:complement(17779592..17787652)
Genome browser
AA seq
474 aa
AA seq
DB search
MATDSWALAVDEQESTTKTIGNLRIMEAGDANLHQTDDDGDKSDEEEKEDRATQSLLNKL
IRSNVVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENALPM
MLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPGLKWPQCLCISPTYELALQTGKVIEQM
GKFYPEVKLAYAVRGHKMERGVKIKEQIVIGTPGTVLDWCVKLKLIDPKKIKVFVLDEAD
VMIATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLD
TIKQYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKTANWLAGQLSKEGHQVALLSG
EMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDGNPDNETYLH
RIGRTGRFGKRGLAVNMVDSQRSMEILKTYERHFNKKIGRLDTDDLDEIEKIAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgactcgtgggctctagctgtggacgaacaagagtctacaaccaagactatt
gggaacttgcggattatggaagcgggagatgccaatttacatcagactgatgatgatggc
gacaaatccgacgaagaggaaaaagaggacagagccacacagtctctcctaaacaagctg
atcagaagcaatgtggtcaacaacacaaaccaagtggaggttcttcagagggacccaaac
tcaccactttattcagtcaagaccttcgaggagctgagactgaaaccacagttgctcaaa
ggcgtctatgaaatgggcttcaacagaccttctaaaatccaagagaatgcccttcccatg
atgctcgccgaaccacctcagaatctgatcgctcagtctcagtctggcactggtaaaaca
gctgccttcgtgctggccatgctcagtcatgtggacccaggcttaaaatggcctcagtgt
ttgtgcatttctcccacatatgagctcgctctgcagacggggaaagttattgagcagatg
ggcaagttttatccagaagtcaaactggcatatgctgttcgaggacataaaatggagcgt
ggcgttaagatcaaggagcagattgtcatcggcacacctgggacggttctagactggtgc
gttaagctgaagctcatcgaccccaaaaagatcaaagtgtttgttctagacgaggccgat
gtgatgatcgccacacagggacaccaggaccagagcatccgcattcagagaatgctgccc
aaaggctgtcagatgttacttttctctgccacctttgaggactctgtgtggaagtttgcc
gagcgggtcgtgccagatcccaacatcatcaagcttaagcgagaagaggagaccctggac
actatcaagcagtactacgtgctctgcaacagcaaagaggacaagttcaacgcactctgt
aacatctacggagccatcactatcgcacaagctatgatcttctgtcatactcggaaaaca
gccaactggctcgccggccagctgtctaaggaaggccaccaggtggcgctgctcagtggg
gaaatggtagtcgagcagagagctgcagttattgaacgtttcagagatggcaaggagaaa
gttctcatcactactaatgtctgtgcaagaggtattgatgttgaacaagtgtcagtggtg
atcaactttgacctccctctggacaaagatggcaatccagacaatgaaacgtacctccac
cggatcggcagaacaggacgttttggtaagagaggactcgctgtcaacatggtggacagt
cagcgcagcatggagattctcaagacatatgagaggcattttaataagaaaattgggagg
ctggacacagatgatctcgatgaaattgaaaaaatcgccaactga
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