Carassius auratus (goldfish): 113041696
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Entry
113041696 CDS
T07313
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
113041696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113041696
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
113041696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Sec62
DUF3043
Menin
Tim54
Connexin
T6SS_Tle1-like_C
MDM10
SLC52_ribofla_tr
CDC45
Mat89Bb
MPM1
Neur_chan_memb
NPR3
Snu56_snRNP
CPSF100_C
BSMAP
Zip
FRQ
Eapp_C
RNA_pol_Rpc4
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
113041696
NCBI-ProteinID:
XP_026056150
Ensembl:
ENSCARG00000011010
UniProt:
A0A6P6J710
LinkDB
All DBs
Position
23:18885981..18897363
Genome browser
AA seq
671 aa
AA seq
DB search
MSSCFHSHTCDADDDVSVALMCVKAAEDRWLDQSARMSAQVRPLVPPTFLLEGLEQVAIT
TEDIIEEKHPKAGTYFNANNSNNNEEEEKKKKKKKERKEKKEKKEKKEKKKKEAEEKEKE
KEKEKEKKEPPKEIEVVDPAGNMYYNWLFVITCPVMYNWVLIIARACFEELQSDYLMYWF
ILDFLSDLVYLLDMVFRTRTGYLEQGLLVKDEKKLRDRYTQSIQFKLDLASMVPTDIFYF
YFGLNYPEIRMNKLLRVNRLFEFFQRTETRTNFPNLFRISNLVMYIVIIIHWNACMYYSF
SKAIGFGTDKFVYPDISDPEFGRLERKYAYSMYWSTLTLTTIGETPPPVKNSEYFFVVTD
FLVGVLIFATIVGNVGSMITNANAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFL
WTNKKAVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYS
PGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSRAGNRR
TANIRSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGRQILMKDNLLDLELAKQGPDPK
DMEEKVVKIGSVLDDLQTCFARLLAEHDATQGKLKKRMTKLEKKITDSSRAVLSEMLDPD
LETAEKKEEKE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagctcatgctttcactcgcacacctgtgatgctgatgatgatgtcagtgtggcgcta
atgtgtgtgaaggcagcagaagacaggtggcttgaccaatcagccaggatgtctgctcaa
gtgaggcctctggtcccgcccacatttctcctggaagggctggagcaggttgcgataacc
acagaggacattatagaagagaagcacccaaaagctggaacttacttcaatgccaacaac
agcaataacaatgaagaagaggaaaagaagaagaagaagaagaaagaaagaaaggagaag
aaagaaaaaaaagagaagaaggaaaaaaagaaaaaagaagcagaagagaaagagaaagag
aaagagaaagagaaagagaagaaagagccaccaaaggagattgaggttgtggatccagcg
ggaaacatgtactacaactggctctttgtgatcacctgtcctgtgatgtacaactgggtt
ctcatcatagcgagagcttgcttcgaggagctgcagtcggactatctgatgtactggttc
atcctggatttcttatcagatctggtgtatctactggacatggtgttcaggaccaggaca
ggatatctggagcaggggctgctggtgaaagacgagaagaaacttcgcgatcgctacacg
cagagcatccagttcaagctggacctggcctctatggttccgactgatatcttctacttt
tactttggtctgaactatcccgagattcgcatgaacaagctactaagggtcaaccgcttg
tttgagtttttccagcgcacagaaacacggactaactttcccaacctgtttcgaatctca
aatctcgtcatgtacattgtgatcatcatccactggaatgcctgcatgtattactccttc
tccaaggccattggctttgggacggataagtttgtgtatccggacatctcggaccctgag
tttggcaggttagagagaaagtatgcatacagcatgtactggtccacactcacgctcacc
accatcggtgaaacgccgccccctgtcaaaaactcagagtacttctttgtggtgacggac
ttcttggttggcgtgttgatttttgccaccattgtcggtaacgtcggctccatgatcacc
aacgcaaatgcggcacgagcagatttccaggctcgcatcgatgccatcaaacagtacatg
agcttccgaaaggtcaccaaagacttggagaaacgggtaataaagtggtttgatttcttg
tggaccaacaagaaagcggtggatgagagggaagtgctgaagtaccttccggacaaactg
cgtgcggagattgctataaatgtccacctggacactctgaaaaaagtgcgcatctttgca
gactgcgaggccgggctcctggtggagctggtgctgaagcttcagccacaggtctacagc
cccggagactacatctgcaagaagggtgacatcggtcgcgagatgtacatcattaaagaa
ggaaagctggctgtggtggctgatgatggagtcacgcaattcgtggtgctgagtgatggc
agttacttcggagagatcagcatcctcaacatcaagggcagtagagcaggcaaccgaaga
acagccaacatccgcagcatcggctattcagacctcttctgcctgtccaaagatgacctg
atggaggcgctaactgaatatccagatgccaaggccatgctggaggagaagggacgacaa
atccttatgaaggacaatcttctggatttagagctggccaagcagggacccgatcccaaa
gacatggaggaaaaggtggtaaagatcggcagcgtgttggatgaccttcagacgtgcttc
gcccggcttttagccgaacatgatgcaacacaagggaaactgaagaagcgcatgactaaa
ttagaaaagaagataacagactccagcagagcagtgctttctgagatgctggacccagat
ctggagactgcagagaagaaagaagagaaggaatag
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