Carassius auratus (goldfish): 113041913
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Entry
113041913 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113041913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113041913
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113041913
mRNA degradation factors
3'-5' decay
Pan complex
113041913
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
113041913
NCBI-ProteinID:
XP_026056276
UniProt:
A0A6P6J7P4
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Position
24:complement(650424..659750)
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AA seq
428 aa
AA seq
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ITMAQIDQSENPGVPSEVDSYHSLFPLEPLPPPNRLQKTSNFSYITSCYKAVNSKDDLPY
CLRRIHGFRLVNTKCMMLVDMWKKIQHSNTVTLREVFTTKAFGDHSLVFSYDFHAGXETL
FSRHFNDPAADSYFTKRKWGQHELPPPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLAC
RVMDPSKILITGKTRLRVNCVGMFDVLTFDSSQTNHLALMPQYQQADLISLGKVVLALAC
NSLAGIKRENLQKAMELVSINYSSDLKNLILYLLSEQSRLRSVNDIMPMIGARFYTQLDA
SQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLF
HQVTEAGTPWIDLSHIVSCLNKLDAGAPEKISLVSRDEKSVLVVTYSDLKRCFESTFQEL
LAATNGPL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
ataacgatggcacagatagatcagtctgagaaccctggagtgccgtctgaggtcgacagt
taccacagcctctttcccctggaaccccttcctccaccaaaccgtcttcagaaaaccagc
aacttcagttacatcacttcctgttacaaggcagtcaacagcaaagatgacctgccttac
tgcctcaggaggatacatggcttcaggctggtcaacaccaagtgtatgatgctggtagac
atgtggaagaagattcagcactccaatactgtgaccctcagagaggtcttcaccaccaaa
gcattcggagaccactcactggtattctcctatgacttccatgcggggncggagaccttg
ttcagcaggcacttcaacgatccggcagcagattcttacttcacaaagagaaagtggggg
cagcatgagctccctcctccacggcagcatgcgggcctgttaccagagtcgctcatttgg
gcctacattgtccagctgagctcagcactgcgcaccattcacacggctgggctggcctgc
agggtcatggaccctagtaagatcctcatcactggaaagacacggttgcgagtcaactgt
gtaggaatgtttgatgtcttaacatttgacagtagtcagaccaaccacctggcgctgatg
ccccagtaccagcaagcagatctcatctccctggggaaggtggtgttggctctggcgtgt
aactctctagctggcattaagagagagaatctgcagaaggccatggagctggtgtcaatc
aactactcttctgacctcaagaacctcattctgtacctgctttcagaacaaagccgtctg
cgcagcgtcaatgacattatgcccatgattggagcacgattttacactcaacttgatgcc
tcgcagatgagaaatgatgtcattgaggaggacctagccaaggaggttcaaaatgggcga
ttgttccgcctgctggcaaaactgggaacgattaacgagagaccagagttccagaaggac
ccaacgtggtctgagactggtgaccgttacctgctgaagctcttcagagatcacctgttc
caccaggtgactgaggcaggcacaccctggatcgacctcagccacatcgtgtcctgtctc
aataagttggatgctggagcaccggagaagatcagtctggtgtcacgggatgagaagagc
gtgctcgtggtgacttactcagacctgaagcgctgctttgagagcaccttccaggaactg
cttgctgccacgaacggccccctgtaa
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