Carassius auratus (goldfish): 113042143
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Entry
113042143 CDS
T07313
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113042143
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113042143
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
113042143
NCBI-ProteinID:
XP_026056515
Ensembl:
ENSCARG00000013947
UniProt:
A0A6P6J842
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Position
24:4281322..4298192
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AA seq
800 aa
AA seq
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MHISALPYSLSVIMAALYQGTDSSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVALMWP
LLSICYLLGPRSRVGQVIHTPFIKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPPLEL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFNN
VGEEPFEDRKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEF
GKFLGLFLLVLISFTIGLTQLYGKDKDLSSSKNITKDCAGIFCREQSNDTFHTFMGTCYA
LFWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIA
NHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKR
QNSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRN
EMRDLLGFRTSKYAMFYPRN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggactcgtcttctccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttcttctggcctgcgagaagggagactactacatg
gtaaagaaacttctggaggagaaacgacatggtgaattaaacattaactgtgtagatgta
cttgggagagatgcggtcaccatttcaatcgaaaatgagaatctagacattttgcagttg
ctcttggatcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctgctaaaccatcggcccagacgttcctctaaaccttctatt
gcgaaattgatgcagcgcattcaaaacccagagtattccaccaccatggatgttgctcca
gtcattcttgctgcccaccggaacaattatgagattttgaccatgctattaaaacaagac
atctctctgccacgaccccatgctgtagggtgcgagtgcaccctctgtaatgccaagaac
aagaaggacagtctccgtcactcaaggttccgtctagatatctatcgatgccttgctagc
ccatccttgatcatgcttacagaagaagaccccattctgagagcattcgagctcagtgct
gatctgaaagagctaagcctggtggaagtggagtttcgcaatgattatgaagaacttgcc
aagcaatgcaagatgttcgccaaggacttgctggctcaggcccgcaactctcgcgagctg
gaggtcatactgaaccacacgtccagtgaggaccacgtagacaagagaggcctactagag
gaacgcatgaacctcagtcgcctcaaactggccataaaatacaaccaaaaggagttcgtt
gcccagtccaactgtcagcagttcctgaacacggtgtggtttggcgagatggcgagctac
cgccgcaagcacacatgcttgaagatcctgtatgttttgagcgtggcgctgatgtggcct
ctgctgtccatctgttacctgctgggaccccgttctcgagtgggccaggtcatccacaca
ccttttatcaagttcatcatccatagtgcctcctacttcacctttctgctccttctaaac
ctttattcactggtctacaacgaggataagaagaacaccatgggtccccctttggagctg
atagactaccttctcattctctggattataggcatggtgtggtctgatgtgaagcgtctg
tggtatgagggattggaggacttcctggaagagtcacgcaaccagctgagttttgtcatg
aactcgctttatttggccacttttgccctaaaagtggtggctcacagcaagtttaataat
gttggtgaagagccatttgaagacaggaaaaattgggatgcgttccatcccctcttggtt
gccgaaggcctttttgcgttcgccaatgttctgagctatctccgtctgttcttcatgtat
accaccagctccatcttggggcctttacagatctccatgggccagatgctacaagagttt
ggcaagtttcttggcttattcttgctcgtactcatctctttcaccattggtctgacacag
ctctatggaaaagacaaggacctatccagctccaaaaatataaccaaggactgcgcgggc
atcttctgtcgagagcagagcaacgacacctttcacacgtttatggggacatgttacgcc
ctcttctggtacattttttccctggcacatgtggctctgtttgttacaaggattagctac
acagaggagctgcggtcgtttgttggtgctcttatcgtcggtacctacaacattgttgta
gtcatcgttctcaccaaactcctagtggccatgctgcataagagcttcagacagattgct
aaccatgaagataaggagtggaagtttgcccgggccaagctgtggctcagctacttcgat
gacaagtgcacactgcctccacctttcaacatcctaccctctcccaagaccgtgtgttac
ttggtcatcagcttgagcaaatggatttgttcccacacctccacaggcaaggtcaaaaga
caaaatagcctcaaggaatggaagaacctgaagcagaaaagagatgagaactatcagaag
attatgtgctgtcttgttcaccgttacctgacctccacaaggcagaagatgcagagcact
gaccaggccacggtagagaacctcaatgatctgcggcaagacctctccaaattccgcaat
gaaatgagagatcttttgggcttccgcacctccaaatatgccatgttttaccccagaaac
taa
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