Carassius auratus (goldfish): 113042319
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Entry
113042319 CDS
T07313
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113042319
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113042319
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113042319
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113042319
mRNA cycle factors
Stress granule specific factors
113042319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
113042319
NCBI-ProteinID:
XP_026056860
Ensembl:
ENSCARG00000060169
UniProt:
A0A6P6J8Z3
LinkDB
All DBs
Position
24:complement(12716710..12831790)
Genome browser
AA seq
678 aa
AA seq
DB search
MAQVKVQTSAPLSGPGLTAVAPAVAKPSPGALGLQPTINGTVPATTPTCPSPAPGFVDST
VPASPSAPPQEYMANPKEKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGN
QIWESEGSSIKKAQHCAATEALTESVLPRPPPRSPKADSNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYGANYNFRGMFNQRYHYPVPKVFYVQLTVGNNEFIGEGRTRQAAR
HSAAMKALQALKNEPIPERPPQCLEENNETEENSDASKSEISLVYEIALKRNLAVNFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSLLQELKKLPVLPVVEKPKVHY
KKRPKTILKTEPEYGQGMNPISRLAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVDT
EVTTGTGPNKKVAKRNAAEAMLLHLGYKASTPLQNTPEKMDNKSWNGQRAAFPETTTNTQ
KGILHLSPDVYQEMEASRNKGVPGAPGNYLTPKDIGQGSTGPFYTPSVGNTATIARELLL
SGTSPTAEALSLKGKAPALACGSIQPSQQLEYLAHIQGFQVQYSDRQTENEFMTYLTLSP
VQMTFHGIGSSIPASHDQAALSALKQLSEQGLDPVDGPIKVENGSCDIQAKRLAERMDSK
PTNSGTTAQDSKDSKAVV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacatcagcccccttgtctggacctggcctgaccgctgtt
gcgcccgctgtggccaagcccagtccaggagctctgggtctgcagcccaccatcaatggc
acagtgccagccacaacgcccacctgccccagccctgcccctggctttgtggactccact
gtaccagccagcccatcagcccctcctcaagaatacatggcaaaccctaaagagaaaact
cccatgtgtttggtgaatgagttagcccgtttcaacaggattcaacctcaatacaagttg
ctgaatgagaaagggccagcacatgctaagatcttcacggtgcagctgtgcttggggaac
cagatatgggagtcagaaggcagcagcatcaaaaaggcccagcactgtgcagctaccgag
gccctgacagagagcgttctcccccggcctcctcctcgctcacctaaagccgacagcaac
agcaacccaggcagcatcactcctacagtggagttgaatggcttggccatgaagcgaggg
gagccagctatctacagacccctggaccccaaacccattcccaactacggagccaattac
aactttagaggaatgttcaaccagaggtaccattacccagtgcctaaggtattttatgtg
cagctgacagtggggaacaacgagtttatcggagaggggcggactcgccaagctgccaga
cacagtgcggccatgaaggcccttcaggccctgaagaacgaacccattccagagagacca
cctcagtgtttagaggagaacaacgaaacggaggagaacagtgatgccagcaaatctgag
atcagcctggtctacgagatcgcgcttaaaaggaacctggctgttaactttgaggtgctg
aaggaaagtggacccccgcacatgaagagtttcctcacacgtgtgacggtgggggagttc
tcagccgagggagaggggaatagtaagaaactctctaaaaagagagcggccctctccttg
ctgcaggaactgaagaaacttccagtgcttcctgttgtggagaaacccaaagtgcattac
aagaagcggcctaaaaccatattaaagacagaaccagagtatggacagggcatgaaccct
ataagcagactggctcagattcaacaggccaaaaaggagaaggagcccgaatatatgcta
ctttcagagagagggatgcctcgccggagagaattcattatgcaggtgaaagtagatact
gaggtgaccacaggaactggacccaataagaaagtggccaagcgtaatgcagctgaggcc
atgctgcttcacctgggctacaaggcatctacaccattacagaacactccggaaaagatg
gacaacaaaagctggaatggacaaagggctgcttttcccgaaacaacgaccaacacacaa
aaaggaattcttcacctctccccggatgtgtatcaagaaatggaagcgagtcggaataag
ggagtccccggtgcccctggaaactacctgacacccaaagacattggacaagggtccaca
gggccattctacaccccgtcggtgggcaacactgcaaccattgcaagagagctgctgctg
agtgggacttcgcccaccgctgaggccctgagcctgaagggaaaagcacctgctttggcc
tgtggctccatccagccttcccagcagctggagtacttagcccacattcaaggcttccag
gtgcagtactcagatcggcaaactgagaacgagttcatgacctacctgaccctctcacct
gtgcagatgaccttccacggcattgggagctccattccagctagccatgaccaggctgct
cttagtgccttgaaacagctgtcagaacaaggactggaccctgtggatggaccaatcaag
gtagaaaatggatcatgtgacatacaagcgaaacgtctagccgagcggatggacagcaaa
ccgactaactcaggcaccactgctcaggacagcaaggattcaaaggccgtcgtctag
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