Carassius auratus (goldfish): 113042342
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Entry
113042342 CDS
T07313
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113042342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caua03032
]
113042342
03400 DNA repair and recombination proteins [BR:
caua03400
]
113042342
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
113042342
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
113042342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
113042342
NCBI-ProteinID:
XP_026056918
Ensembl:
ENSCARG00000053303
UniProt:
A0A6P6JBT2
LinkDB
All DBs
Position
24:13395894..13419766
Genome browser
AA seq
1517 aa
AA seq
DB search
MSEGNKEAYIVKFVERNGQKSDLALQAYKAIVELQSEKYVQTLDEEAALELDHNDKSLFV
FSDFTSSAFDRCRGLGCRIVSPLVVLFCLQKQRCVPKAEQPVYNMAMADVTISCTNLDKE
ARSEVMDLVQLMGGRVYRDLNVSVTHLVAGEVGSKKYLVAASLGKPILLPSWVKVCWEKS
QDSVFHHSELKTEDYRCPVLKGCTVCVTGLSTVERKEVQRLCDQNGGNYTGQLKMNECTH
LIASEPTGQKYEFARKWNVYCVSLHWLFDSIEKGFCQDESRYAVERGKKAAEEKPGRPNT
STPTGSNRSKEEGPSLLGLSHISNISMNVNETALTTAGISHIETPDPVDSFDVTVCRVDD
LLDGCKLYLCGVSGKKLEKLRRMVNSAGGLRYNQPSQELTHIVMGEPDQGVKVFLDKATH
RPHIVTVQWLLESFSRGSLLPEDGYLHPSFLPPAPAAVDMPAPHKAAPRASRPSIAPPPA
RSPGRQARAEEDLLSQYMENDQTVVELPQATDSTSTRQSESVLLPEPPPAVKDSTFVETS
VGGLFAGKRFILVGFGAEAEAQLSELVMENAGKILVGRSRAVAHYAIVPLLGCDVEATVD
EVATDTWLAMCVEQQCVLPLPSHPLFTPVAVREGFYPLKDCVLSVSQFTGSERESLIQLA
EHLGASVQDYFVRTANQRKGMLASTHLVLQTPEGTKYQAAQKWGLPAVTIRWVLESARTG
KRADEARYLVDLPPSPERTEDSFVGASQKYPPPLHLLQRSPELPLLGPQNSAAITPLDTA
RFQSRTVRSAVRKLRQGEEEQANVATPGQEEAKGALQKDSSLQLDTPSRFLSRDKLFGPS
FNTKDVFDHLQTPGNKPQQGQGAETPLSEVIERNLKAAVANSNRSHVTSLAAMTASPQLG
KEPEAEVKQKAAAPLSGVVVCISKKLSKKQSELNAVAASLGADFRWSCDDSVTHYIYQGK
VGDNSKEYKAVKERGLHIVSQHWLQACADEQKHVSESLYPFTFNPKMSLTMSQVADSTQR
SPPPSTPRTRLRPFTENEETRLSPVDSIADISTPRSVSVGEPEKDQTASTERNLTETLEM
RESLQKQLQEIMSATKLTSGRRGSSRLVRTGSGGLESPHTPDSLGRMGRRSRTLEALRMS
RQVAVDLNTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSETIVPPPLSDHTARD
SMTDSELVEMAAFEVIDAQLKPKVTPPPADRLQSPETPEALALAFPTSKPAVPSLPQTED
KEEEKHPPRFLLSSLNPQERIDYSHLIEELGGVVLEKQSFDPSCTHVIVGYPLRNEKYLA
AMAAGKWILHRSYLEACRAEGHFIEEEQYEWGSSSILDALPSINSQQKRLALAAMRWRKT
LQDSSNKEGAFGGWTVMLNIDQAREAGFRRLLQSGGAKVLPDPSPSLFKEATHLFVDFSR
LKPGDVRVDVSEAAAQGVKCLKPEYIADYLMQEPSPSMDAYYLPGAATDDLEKVQDTSSR
KRKASGEKSTLKKSRVR
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggcaacaaggaggcatacattgtgaaatttgttgaacgcaatggacaaaag
agtgatcttgctctccaggcctataaggcaatagtggaactgcagtcagagaaatacgtg
cagacgttggacgaggaagccgctctagagctggaccacaatgacaagtccctgtttgtt
ttcagtgacttcaccagcagtgcctttgatcgctgcagagggctgggatgcaggatcgtg
agtcctctggtagtgctgttttgtctgcagaagcagagatgtgtgcccaaagcagagcag
cccgtgtacaacatggccatggctgatgtcactatctcctgcaccaaccttgacaaagag
gcacggagtgaagtgatggatcttgtccagctgatgggtggacgggtctaccgtgatctc
aatgtgtctgtcactcacctggtggcaggtgaagtggggagtaagaaatacctggtggcc
gcaagccttgggaagcccattcttttgcccagctgggtgaaagtatgctgggaaaagtct
caggatagtgttttccatcactctgaactgaaaacggaggactatcggtgtccagtcctg
aaaggctgtacggtgtgtgtgacgggactctctactgtggagcgtaaagaggttcagagg
ttgtgtgaccagaatggaggcaattacacagggcagctcaagatgaatgagtgtactcac
cttattgccagtgaacccacaggtcagaaatatgagtttgcccgtaaatggaacgtatac
tgtgtgtccctgcactggctgtttgacagcatcgagaagggcttctgtcaggatgagagc
aggtatgccgtggagcgtggaaagaaggcggcggaggagaagccaggcagacccaacact
tccactcctacaggatccaacaggagcaaagaggaaggtccctcacttctgggattgagc
catatttctaatatcagtatgaatgtcaatgaaacagccctcaccacagcaggaatcagc
cacatagagactcctgatccagttgactcatttgatgtcactgtttgtcgagttgatgac
ctgttggatggctgtaagttatatctatgtggcgtatcaggaaagaaactggagaaactg
cggcggatggtgaactctgccggagggctgcgctacaaccagcccagccaagagctgacc
catatagtgatgggtgaaccagaccagggggtcaaagtcttccttgacaaagccactcac
agaccccatatagtgaccgtgcagtggttgctggagagtttctcccgtggctctttgctc
ccagaggatggttaccttcacccctcatttctgccccctgccccagctgctgttgatatg
cctgctcctcacaaagctgccccccgcgcctccagaccctctatagctccccctcctgcc
cgtagtccaggccgacaagccagagcagaggaagacctgctatcacagtacatggagaat
gaccagactgtggtggagctgcctcaggccactgatagtaccagcaccaggcagagcgag
agcgttttgcttccagagcctccacctgcagtgaaagactccacctttgttgaaacctca
gtgggtggcctttttgcagggaagcgttttattttggttggttttggagctgaggctgaa
gcgcagctctcagaactagtcatggaaaacgctgggaagatcttggtcggccgctccaga
gctgtggcgcattatgccatcgtgccactgttgggctgtgatgtggaggccacggtagat
gaggttgcgacagatacctggctggccatgtgtgtggagcagcagtgtgttttgccacta
ccctctcatcctctgttcactccagtagcagtgagagaaggcttctatcctctcaaagac
tgtgtgttgtccgtcagtcagttcactggatctgagcgggagtctctcattcagcttgct
gaacacctgggagcgagtgttcaggattactttgtgcggactgctaatcagagaaaagga
atgctggccagcactcatttggtactccagactcctgagggcacaaagtaccaggcggcc
cagaaatggggtctacctgcagtcacaatccgctgggttttagaatctgccagaacaggg
aagcgtgctgatgaggcacgatacctggttgacctgcctccctctccagagagaaccgag
gacagttttgtcggagcatctcagaaatacccgccaccactgcacctccttcagcgctct
ccagagttaccacttctgggcccacaaaatagtgctgccatcacccctctggacacggct
cgctttcagagtcgcactgtccgctcagcagtcaggaagctgagacagggagaggaggag
caggccaatgtagcaaccccaggacaggaggaggccaaaggagccctgcagaaagactct
tccctccaactagacactccctctcggttcctgagcagagacaaactcttcggaccctca
tttaacacaaaggatgtgtttgaccatttgcagactcctggtaataagcctcagcaaggt
cagggggctgagactcctctgtcggaggtcattgagaggaaccttaaagctgcagttgcc
aacagcaaccgcagtcatgtcacgagtctcgcagccatgactgccagtccacaactggga
aaagagcctgaagctgaggtgaagcagaaggctgcagctcctcttagtggggtggtggtg
tgtataagcaagaaattaagcaagaaacagagtgaactcaatgcagtggccgcctctcta
ggagcagacttcagatggtcgtgtgatgactctgtcactcactacatctaccagggtaaa
gtaggagacaacagtaaggaatacaaagctgtcaaagagagaggactacatatagtgtca
caacactggctacaggcttgtgcagatgagcagaagcatgtgtccgagtcactctaccct
tttacattcaaccccaaaatgagcctcaccatgagtcaggtggcagatagcactcagagg
tcacctcctccgtccaccccccgcaccagactcaggccgtttacagagaatgaggagacc
aggcttagtcctgttgacagcatcgcagacatctctactcctcggagtgtcagtgtggga
gagcctgagaaagatcagaccgccagcactgaaagaaatctcacagaaacgcttgagatg
agagagagtcttcaaaagcaacttcaggagatcatgtctgctactaaactgaccagcggc
cgtcgaggctcctcgcggttggtcaggacaggctcagggggactagaatcaccccacacc
ccggacagcctggggcgaatgggaagacgcagccgcactttagaggccctacgaatgtca
cgtcaagtagctgtggacctgaacacagagccatctcagagtgagcagatcgtgtgggat
gaccccactgcacgagaggagagagctaaactggctgataacctgcagtggcctggcagc
ccctcccaacactctgaaaccatcgtcccaccgcccctctctgaccacacagccagggac
tctatgaccgactcggagcttgtggaaatggctgcatttgaagtcatcgacgcacagctg
aagccaaaggtgaccccacctccagctgataggctacagagccctgaaacacctgaagca
ctcgctcttgctttccccacctctaaacctgcagttccttcccttccacagactgaagat
aaggaggaggaaaagcatcctccgcgattcttgctgtcttcattgaacccacaggagcgc
atcgactacagtcatctcatagaggagcttggtggtgttgtgctggagaaacagagtttt
gaccccagctgcactcatgtgattgttggttatcctctgaggaatgagaagtatctggcc
gctatggcagcaggcaagtggattcttcatcgctcgtatctggaggcctgtcgtgcagaa
ggacactttatagaggaggagcagtacgagtggggtagcagctctatcctggacgctctg
ccatccatcaactctcagcaaaagagactggcactagcagccatgcgatggaggaaaaca
ctacaagacagctcaaacaaggagggtgcgtttgggggttggactgtgatgctgaatatt
gaccaggccagagaggctggattcagacggctgctgcagtctgggggagccaaggtgttg
ccagacccttctccttcactgtttaaagaggccacacatctgtttgtggattttagtcgg
ttgaaaccaggtgatgtcagagtggacgtcagtgaagctgcagctcagggggtcaaatgt
ctaaaaccagagtacattgctgattacctcatgcaggagccttctccttcaatggatgct
tactatcttcctggtgcagctacggatgatctagaaaaagttcaagatacatcttcacgc
aaacggaaagcctctggggagaagtccacattgaagaagagtcgtgtgagataa
DBGET
integrated database retrieval system
