Carassius auratus (goldfish): 113042353
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Entry
113042353 CDS
T07313
Name
(RefSeq) transcriptional activator GLI3-like isoform X1
KO
K06230
zinc finger protein GLI3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113042353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113042353
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
113042353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
113042353
NCBI-ProteinID:
XP_026056937
Ensembl:
ENSCARG00000056913
UniProt:
A0A6P6J939
LinkDB
All DBs
Position
24:13970975..14293762
Genome browser
AA seq
1598 aa
AA seq
DB search
METQSQTSSAAEKKKRVETTVATKSVPTRTEISEKAVASSTTSNEDDSSVSHYRRERRNA
ISGQAVVLGISGKLSEEPPTSTEDRPPLVKKELYSSLLHLADHTLPYRGTLFAMDPRNGY
LDPHYTTPQFFPAFHPPVPIDDRHTQGRYIYDPSPVPPLHLPPALAASPAFSDISLIRIS
PHRNPSVGAESTFNPPHPYVNPYMDYIRSLHSSPSLSMISAARGLSPADAPHASLTTAEY
YHQMALFAGHRSPYADIIPSVSSSSGPTSSALHMEYLQAMETSRFPSPRLTNRPSRKRPL
PISPSLSDPSFDLQAMIRTSPNSLVNLLNNSRSSSSTSGSYGHLSAGSISPALSFAYPPT
PVALQMHQQLISRQQGIVGSAFGHSPPLVHPSPAFATQRPVPGIPPSSLPPTERSTASHD
SQSKPTSESAVSSTGDPMQHKRSKLKPDEEPPSPGVIRMQEQMDGMTLVKEEGDKEEGKQ
EPEVVYETNCHWEGCCREFDTQEHLVHHINNDHIHGEKKEFVCRWEECSREQKPFKAQYM
LVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASD
RAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDTYPRPPP
QPREPEGNEQGQSPGQLPLRAITDQKEYNHPTLKQDECLQVKSIKTEKPMTSQPSTGGQS
SCSSDQSIGGPHIGRGVQLTVNSIGLAGEEAVTEENEEKEEEGEGEEEELTPIMDSTVST
GTTTVATLALQTRRSVGRPLRWMEHVKMERLRQVNGAVPKLGHMSPTLPTKGQTLPALTG
KGSCLGRSSSVGVPQPPPRIEPSNTELTVFNLLPERRDSSGSNTSSAYLSSSRRSSGISP
CFSSRRSSQASQSEHNHHRHIHNLSATDSYDPISTDASRRSSEDSQSGGVGSSGGMVYSG
SEGIGGSGMGTRGVLNLTPAQHFYLKAKYAAATGGPPPTPLPNMEHMSLKARLALMEDKQ
NLSQLTLPPLVRPRRCSDGMHNLHGSEAVYRRRGLYPVEGTGNSDRRASDPVHARDTSAF
GLPQLQRFSSLNNMNSLPHIAGNHYLDGENNNLRFQNYIFQRSLLSPCPPSIMEQSALED
LAMNQDGLLLHVDEDILPDDLVQYLHSQGQESDHNQDNQSSDSSPHRSSFDQVTVDVQNF
LNPQQQQEETEGENTSKDIMPIQWNEVTSGSADVSPPRQQSQCRKWSDQSGIVSNAFGHI
GNMVVQPQLHTEFMDQHSTLCRDGVEHMAGMNYRCIHPEQRQQIAKPSQQMPRNNLGIKN
ESSLNSKLESRPNNFGRPDFSHISLGPFLPSCTQQTTISQNSFKQNLLLQRPTNCSLSPA
TLLPNQAQHPMTHPSVNSDHTGLYHTQLYFIQQVNNGHNAHSCHQQSLRNGNGTNCSHPN
QVSGLKLEVDYLQTNTSSCIQQQKPVFIAESFDTSESKTSSSRDTGQSCLMESLTAETET
PSENLLSPGVDKVTSTVEESLGVLDNVGLDICSILEDGYEQGSVVSDIISPVFFQGLYRT
SSQQTTPFHPGTNNMAIGDMSSLLTTLAEESKFLAIMQ
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagtcacagaccagttctgcagcagagaagaaaaagagagtggagaccact
gtagccaccaagagcgtgcccacccgtacagaaatcagtgaaaaggcagtggcctccagc
actacctccaatgaggatgacagttcagtttcccactatcgtcgtgaaaggcgtaatgcc
atcagtgggcaggctgtggttctgggcatatcaggaaaacttagtgaagagccacccact
tctacagaagaccgccctccattagtgaagaaagagctttatagctctctgctccacctg
gcagaccacaccctgccctatcgggggacactgttcgccatggaccctcgcaatggatac
ctggaccctcattatactacacctcagttctttcctgcttttcatcctccagtaccaatt
gacgatagacatacacaaggccggtacatttatgacccctcaccagtacctccgctacac
ctgcctcctgcactggcagccagcccagcattttctgatatctccctcatccggatctcg
ccacatcggaacccttccgttggggcggagtcaaccttcaacccccctcatccatacgtt
aacccgtacatggactatatccgttcgctgcacagcagtccctctctgtcaatgatctct
gcggccaggggcctcagtcctgcagatgcaccccatgccagtttgactacggcagagtac
taccaccagatggccctatttgcaggtcaccgcagcccatacgctgacatcattccttca
gtgtcatcctcatcagggcctacaagcagtgctctgcatatggagtacctacaggctatg
gaaacctcacgatttccaagtcctaggctcacaaatcgccccagtagaaaacgacccctt
cccatctctccttccctgtctgaccccagttttgacctgcaggccatgattcgcacctcg
cccaattctctagtcaatttacttaataattcccgctccagctcatccaccagtggatcc
tatggacacctctcagctggttctatcagccctgcactgagttttgcatatcctccaaca
cctgtggcactgcaaatgcatcagcagctgatcagtcggcaacagggcatcgtaggttct
gcgtttggacacagtccgccccttgtgcacccctctcctgcctttgcaacccagagacca
gttcctggcattcctccatccagcctgccacctacagaacgttccacagcctcacatgac
tcacagagtaaacccaccagtgagtcggctgtaagtagcacaggggaccccatgcagcac
aaacgctccaaactcaaaccagatgaggagccgcccagccccggagtcattagaatgcag
gagcaaatggatggaatgacgctggtgaaagaggagggtgataaagaggagggcaagcag
gagccagaggtggtgtatgaaaccaactgccactgggaaggttgctgcagggagtttgac
acccaggagcatcttgtgcatcacataaataatgatcacatccatggagaaaagaaggag
tttgtctgtcgttgggaggaatgttcaagagagcagaaaccttttaaggcccagtacatg
ctggtagtgcacatgcgcagacatacaggagaaaagcctcataaatgcacgtttgaaggc
tgttcaaaggcctattccagactggagaacctgaagacacatttgcgttcacacacagga
gagaaaccttatgtgtgtgaacatgaaggctgcaacaaagccttttccaatgcatcagac
cgagccaaacaccagaatcgcacacactccaatgagaaaccatatgtgtgtaaaatccct
ggttgcactaaacgatacactgatcccagctctttacggaaacatgttaagactgtacat
ggtcctgaagcacatgtaaccaagaaacagcgtggggacacatacccccgtcccccacct
cagccccgagaacctgaaggtaatgaacaaggtcagtcacctggacaactgcctctcaga
gcgatcactgaccaaaaggagtataaccatcctaccttgaaacaggacgaatgtctacaa
gtcaagtcaatcaaaacagagaagcccatgacgtctcagccaagcactggcggtcagtct
tcatgcagcagtgaccagtccatcggcggcccccatatcggccgtggagtccagcttact
gtgaacagcattgggcttgcaggggaggaggcagtgactgaggaaaatgaagagaaggag
gaggaaggagagggagaggaggaggaacttacccccattatggactctacagtatctact
ggaacaaccacggtggcaacactagctttgcagactcgtcgaagtgtaggacggccccta
cgctggatggagcatgttaagatggagaggttaaggcaggtgaatggagctgtgcctaag
ctaggacatatgtccccaacactgcccactaaaggccagaccctgcctgccctcacagga
aagggttcatgccttggtaggagtagttctgtgggggttccccagcctcctccacgtatt
gagccatccaacacagagctgacagtgttcaatttgctacctgagcggcgggacagcagt
ggcagcaacaccagctcggcctacctgagcagtagtcgtcgatcctctggcatctccccc
tgcttctccagccgccgttctagccaggcctcgcagtctgagcacaaccatcatcgtcat
attcacaatctcagtgccactgactcttatgaccctatctctactgatgcctcacgacgc
tccagtgaagatagccagagtggaggtgtaggaagttcaggtggaatggtgtacagtgga
agtgaaggtattggaggaagtggtatggggacaagaggtgttctcaacctcactccagct
caacacttttacctgaaggccaagtatgccgctgctacaggtgggcctcctcccacaccc
ttgccaaacatggagcacatgagcctaaaggctcgtctggctttgatggaagataaacag
aacttgagccaacttacactaccaccactggtcaggccacgtcgctgtagtgatggtatg
cacaacttacatggcagtgaagcagtgtatcgacgtaggggattgtatcctgtagaaggt
acagggaatagtgatagaagagccagtgaccctgtgcacgcaagggatactagtgctttt
ggtttgccacagttacagcgtttcagcagtttaaacaacatgaattcattaccccatatt
gctggtaatcattatttagatggagaaaataacaatctgcgcttccagaactacatcttt
cagagaagtctactctcgccttgccctcccagcataatggagcaatcggcacttgaggac
ttggcaatgaaccaagatggtcttctgttacatgttgatgaagacattctgccagatgac
ttggtgcagtatcttcattcccaaggtcaagaatctgatcacaaccaagacaaccaaagc
agtgattccagtcctcatagatccagttttgatcaggttactgtagatgtccagaacttc
ctcaacccacaacagcaacaggaggagacagaaggtgaaaacactagtaaagatataatg
cctatccagtggaatgaagtgacctctggtagtgctgatgtttctcctcccaggcagcag
tctcagtgcagaaaatggtcagaccagagtggcatagtgagcaatgcctttggtcatatt
ggaaacatggttgtgcagccacaactgcatacagagttcatggatcaacactcaactctt
tgtagagatggtgttgaacacatggcaggtatgaactacagatgcatacatccagagcag
cgtcaacaaattgcaaagccatcccaacaaatgccaaggaacaatttaggcattaagaat
gagtcttctttaaactccaaacttgaatcaaggcccaacaactttggtcgaccagacttc
tctcatatctctctgggccccttccttcctagctgtacccagcagacaactatatcccaa
aatagcttcaagcaaaaccttttgttgcaaagaccaactaactgcagcttgtctccagca
acactactgccgaaccaggcccaacatcctatgactcacccatctgtcaatagtgaccat
acaggcttatatcacacacaactctacttcattcaacaagttaacaatggtcataatgca
cattcatgccatcagcaaagcttgaggaatggaaatggaaccaactgctctcatccaaat
caggtttcaggacttaagcttgaggtagattaccttcaaaccaacacttcctcttgtatc
cagcaacaaaagcctgtgtttattgctgagtcctttgacacatcagagtccaaaacttcg
tcttctcgtgatacaggacagtcatgtttaatggagtccttgacagctgagacagaaaca
ccttctgagaaccttctgtcccctggcgttgataaagtgaccagtacagtagaagaaagc
ctaggtgtcttagataatgttggtttagatatttgttccatccttgaggatggttatgag
cagggtagtgtggtttctgacataatcagtcctgtttttttccagggtctgtatagaacg
tcctctcagcagactactccatttcatccaggcactaacaacatggctattggtgacatg
agctccctcctcaccaccctcgcagaagagagcaaatttctggctattatgcagtaa
DBGET
integrated database retrieval system
