Carassius auratus (goldfish): 113042520
Help
Entry
113042520 CDS
T07313
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113042520
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113042520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
113042520
NCBI-ProteinID:
XP_026057221
Ensembl:
ENSCARG00000018214
UniProt:
A0A6P6JAJ9
LinkDB
All DBs
Position
24:18797140..18810246
Genome browser
AA seq
522 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGSIYNSPSSGLSSVSDTTSNGSDSKKLRVEDRVGDAPPSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRSVPVYIQYSNHKELKTDNSNQSGGTLASGANSSNGGGMASSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQYNDPAGAQQAKVALDGQNIYNACCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPPALDPSVVAALGKDSGSLLGKIPGALSPLS
AAAAAAAAAGRVALSGHSGTSGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKD
SALIQMADMNQAQLAMSHLNGQKMFSKIIRVTMSKHHTVQLPRDGLDDQGLTKDFTNSPL
HRFKKPGSKNFQNIFPPSATLHLSNIPQDITEEDLKILFSNSGGTVKAFKFFQDHKMALI
QMTTIEEAIQCLIDLHNYNMGNNHHLKVSFLQINHLKQFERS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgatgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcagcatatataacagccccagttctgggctgagcagtgtcagcgatacgacatccaat
ggcagtgacagcaaaaaacttcgagttgaagacagagtcggcgatgccccaccatcccgt
gttcttcatattagaaagttacccaacgatgtctcggaaacagagatcattgccctgggg
cttccgtttggaaaggtcaccaatatcctcacactgaaaggcaaaaaccaggcatttctg
gagctcagcacagaggaagctgccatgacaatggtcaattattactccgctgtgacgcca
cacgtccgtagtgtgccggtctacatacagtactccaatcacaaagaactcaagaccgac
aattcaaaccagtcaggtgggactctcgcatcaggggccaactctagcaatggtggtggt
atggcctccagtccagtgctgaggataatcattgataacatgttttaccctgtcactctg
gatgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaggccctgttgcagtacaacgatccagccggtgcacagcaagct
aaagtggctctagatggtcagaacatatacaacgcctgttgtacacttcgcatagactac
tcaaaacttgtcaacctgaatgtaaaatacaataatgataagagcagggactacactagg
ccagagcttcctgctggagatgggcagccgcctgctctggacccctctgtggttgctgcc
ctgggtaaagattctggttccctgctcggtaagatcccaggtgctctgagcccgttgagc
gcggctgctgccgccgctgctgcggctggaagagttgctctgtctgggcactcgggaacc
agtggagtgctgctcgttagcaatctaaatgaagagatggttacgccccacagtctgttt
accctcttcggggtttatggggacgtgcagcgtgtgaagattctttttaataagaaagac
agcgcactgatacagatggccgatatgaaccaggctcagcttgcgatgagccatctaaac
ggacagaagatgttttcaaagatcatacgtgttacgatgtcgaagcaccacaccgtccag
ttaccgagagacggtttagacgaccagggtctcacgaaagacttcacaaactcaccacta
catcgtttcaaaaaaccagggtccaagaacttccagaacattttccctccttctgccaca
ctccatctgtcaaacatcccgcaagacataactgaagaagacctcaaaatcctgttctcc
aattccggtggcactgtgaaagccttcaagttttttcaagatcataaaatggccctaatt
cagatgacaaccatcgaggaagccatccaatgcctcatcgacctccacaattacaacatg
ggtaataaccaccacctgaaggtctcctttctccaaatcaaccatctgaagcaatttgag
aggtcttga
DBGET
integrated database retrieval system
