Carassius auratus (goldfish): 113042528
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Entry
113042528 CDS
T07313
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113042528
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113042528
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113042528
03029 Mitochondrial biogenesis [BR:
caua03029
]
113042528
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113042528
Membrane trafficking [BR:
caua04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113042528
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113042528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF6950
Motif
Other DBs
NCBI-GeneID:
113042528
NCBI-ProteinID:
XP_026057230
Ensembl:
ENSCARG00000018390
UniProt:
A0A6P6JA26
LinkDB
All DBs
Position
24:complement(19205304..19225817)
Genome browser
AA seq
1618 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAVQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILSDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCLFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDTAYTNYQQ
DFEDIKLKLTKLGIAVSVMAKIPLLESLTRQSYRESLEKSSSPHPRTSDEDENEDEEVGE
TSTQSAISHKNRKSPSPVSGSGEASSRASFSPQDRLKSSCSLKAALEEEEESLEGGATPS
FNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLSECRETITKLDNQNMKAIK
GLEDRLYALDQMIASCKRLVNEQQELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIM
LTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLERV
RVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVKDGKNLYEAEKVKRECFGKLFR
KSFLRNRLFRGLDSWPSSSFCTRKPRKFDFELPDISLNDLQYLKSCCPSEVQPFLRVPTL
CDFKPLNQHVEVLHQLVQAAQSVDEMSQTITDLLNEQKFSCSQSAQRSTAFTPRSESTTE
ITTTSTKTLSNLSLKAPDCQPLSLPGHLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSL
DLDSLAESPESDFMSAVNEFVIEENLMSPNPISDPTSPEMMVESLYSSVINAIDSKRIHD
TTTLEKENSKIAVLKLSADRYRSAAEESQYNLRKVKEDLYHFRGLVLKEQRDFGCALETM
NIKVQDALDSVRYCHEKELREMRQTDLQSLKDNHEKQIQTLSEELEGNRKIVRDVQRAML
ELEGLVERKEKEISQLESERERSKQELQDLHKQTVRDLEEKISKQGEELKATLLSKDELA
GQLENLHFEIEHGQQKIRQEMEKAEKVHLQELEARLKQQHEAELESLRLEKESALDKLVQ
ENLVKLRDLVDSYSAEVKEREGRLKDLEARITELADARCRLEVEIALKETEMDEMRLQYE
EAKSTQEEVLRGELTTQTATLQTQIAMLNQQLQQKNEDYEMGLAELRALMRLEKDHCISE
LVDRHEKENTLLRQEFSALKQKSQDAEKDFKERVQKIQRNHQDQFDALQKEKENAKRAFQ
EKEQELKTVIGDLQTENSLLSGRLEQEKVEALQRAEKEKEEAVKAALQEALRDFQLQKEE
TETRLLGQIELLENQLRERQSTDIAGPTVEKTETGMETSAALSLDSGQWTEERALLLGQL
ELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIISDLTEKLKNLAQQQEKDKG
LIETLSEDRASILQEKKQMEEELNRLRSTVLVSSSFFPPNPIPVITEAHGSCGPIRVEVL
SRSTPDPERLASVAVLKDEERVESAVEASMMTVHDNPMLSEEKQRIMILERTLHMKEEEN
KRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSE
SLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgtttcaagtcaacaacggaagcacattgacatttgacactgaactt
gctgtccaaaccgtgttggaccttaaacatgccattcaggccaaatataaaattgcagtc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgcgtgtgc
agctacagtgccggaacggacaccaacccgatcttcttattcaacaaagagatgatcctg
tctgaccgagctccaaccatccccaaaacgaccttctctatagagaatgagatggagctg
aaggtggaggagtcactcatgatgcctgccgtctttcataccgttgcatcccgcactcaa
ctggctgtggaaatgtttgaggttgccaagaagctttgcttgttctgtgagcgtctggtc
catgacgaacaccttcagcaccagggatgggcggccatcatggctaacctggacgactgc
accctatcctatcaaaaactcctcatgaaattcgacactgcttatacaaattaccaacag
gattttgaagacatcaaattaaaactcacaaagcttggcattgctgtctcagtcatggcg
aagattcctctgcttgagagtttgactcggcagagctacagagaaagcttggagaagtcc
agctcccctcacccgagaacctcagatgaagacgagaatgaggatgaagaagtaggagaa
acgtccacccagtccgctatcagccataagaatcggaagtcaccctcgccggtctctggt
tcaggggaagcgtcgtcccgggcgtccttctctcctcaggacagactgaagagcagctgt
agtctaaaagcagcgctagaggaagaggaggagtctctggaggggggagccacaccctct
ttcaatgtcacgctcttggattggatcaatgttcaggacagacctaatgatgtggagtcc
gtagtgaggaagtgttttgactctatcaacaggctcgatccacgaattatccaacccttt
ctatctgaatgccgcgagacgattaccaaattggataatcagaacatgaaggccatcaag
ggtcttgaagaccgattgtatgctcttgaccaaatgatagcaagctgtaaacggttggtc
aacgaacagcaggaacttgctcagggatttcttgccaatcagaagagggctgaaaacctg
aaggacacctcggtgctgcctgacctgtgtctgagtcacgccaaccagctgatgatcatg
ctgaccaatcacaggaagctactagacatcaagcaaaagtgtaccactgccaaacaggag
ctcgccaacaaccttcaagttcgtctcaaatggtgctgctatgtgatgcttcacgctgat
caggatggagagaagctgcaggctctcctgaggctgctgacggagctgctggagcgtgtg
cgggtggtggaggcgctcagcactgtgccacagatgtactgtctcgctgtagtggaggtg
gtcagacgcaaaatgtttataggacactacagacaatgggccaatgctcttgtcaaggat
gggaaaaacctctatgaggcagaaaaagtaaaaagggaatgctttgggaagctcttcagg
aaatcgttcctcagaaaccggttgtttcgaggactggactcatggccatcctcttcgttt
tgcacccgtaagcctcgaaagtttgactttgagcttccagatatttccctgaatgacctg
cagtatctcaagtcctgttgtccttccgaggttcagcctttcctcagggtccccacacta
tgtgacttcaagcctcttaaccagcatgttgaggttcttcatcagctggttcaggctgcg
cagagtgtggacgagatgtcacaaactatcacagacctactaaatgaacaaaagttttcc
tgtagccagagtgctcaaagatccaccgcatttacacccagatctgaaagcacaactgaa
atcaccactacctccaccaaaactttgtccaatctcagtttaaaagcaccggactgccaa
cccctgtcgcttcctggtcacttggaggacctatcacctgacagcatagatgcccagact
tttgactttgaaaccattgggcatcccaatatggatcctgtattacagcaaggctcgttg
gacttggactcgttggcagaaagtcctgagtcggatttcatgtcagcagttaatgagttt
gttattgaggagaacttgatgtcacctaatcccataagtgatcccacaagcccagagatg
atggtggagtccctttactcctctgtcattaatgcaattgacagcaagcgtatacatgac
actactacacttgaaaaggaaaattcaaagattgcagtactcaagctgtcagcagacagg
taccgttctgctgcggaagagtcccagtacaatttgaggaaagttaaagaagacctttat
cactttcgaggtcttgttctgaaagagcagagagactttggatgtgccctggaaacgatg
aacattaaggtccaagacgctctcgacagtgtcagatactgtcacgagaaggagctcaga
gaaatgcgacaaacggatctccagagtttgaaggacaatcatgaaaagcagatacaaact
ctatcggaagagcttgaaggcaatcggaagattgttcgagatgtccagagagcaatgctg
gagttggagggcctcgtggagcgcaaggagaaggaaatatctcagctggagagtgagagg
gaacgctcgaagcaagaacttcaagatcttcacaagcaaactgtgcgggaccttgaggag
aagatctcgaagcaaggtgaagaactgaaagctacattgctgtccaaggacgaactcgct
gggcagctggagaaccttcactttgagatcgagcacggccaacagaaaatcagacaagag
atggagaaggcagagaaggtgcaccttcaggaactggaggcacggttgaaacagcaacat
gaagcagagctggagtctctcagattggaaaaagaaagtgcacttgacaaactcgtccag
gagaacctggtgaagctcagagatctggtggattcctattctgcagaagtcaaggaacgc
gagggacgcttgaaagacttggaggctcgcattacagaacttgcagacgcccgctgcaga
ctggaagtggagatagctcttaaagagaccgaaatggatgaaatgagactccagtatgag
gaggccaaaagcacccaagaggaggtgttgagaggagagcttactacccaaacagccacc
ttgcagacgcaaatcgccatgttgaaccaacagctccagcagaagaacgaagactacgag
atgggcctggccgagctccgagcgctcatgaggttagagaaagaccactgcatctctgaa
ctcgtggatcgacacgaaaaggagaacaccctgctgcgccaagagttttcagcactcaag
cagaaatcgcaggatgcggagaaagactttaaggaacgagtccagaagatccagcgcaat
caccaggaccagtttgatgccttacagaaggaaaaggagaatgcaaagagggctttccag
gagaaagagcaagagctaaaaactgttattggagacctgcagacagaaaactcactacta
tctggaagactggagcaggagaaggtggaggccctgcagagggcagagaaggagaaagag
gaggcggtcaaagctgcattacaagaggccttaagagactttcaactccaaaaagaggag
accgagacaagactgttaggacaaattgagctacttgaaaatcaactcagagaaagacaa
tccactgacatagcgggacctactgtagaaaagacagagactggtatggaaaccagtgct
gcattgtcactggacagtggccagtggaccgaggaaagggcattgctcctgggccaacta
gagctcctggaacgaacaaagaacgaggagatgcagaacctgaagacctcgctcattgct
gagcagcagacaaacttcaatactgttctgacccgggagaaactaaagaaagaacaaatc
atcagtgatctcactgagaagctcaaaaacttggcacagcaacaagagaaagataaaggc
ctgatcgaaacgctctctgaggaccgtgcctccatccttcaggagaagaagcagatggag
gaggaactgaaccgtctgcgaagcaccgtcctcgtctcttcgtccttctttccgcccaat
cccatcccggtcatcacagaagctcacggttcctgtggccctatccgtgtggaagtcctc
tcgcggtccacccctgatccagagagattggcatccgtggctgtgctcaaggacgaggag
agggtggagtcagccgtggaggccagcatgatgaccgtgcatgacaaccctatgctgtct
gaagagaaacagcgcataatgattttggaaaggactttacatatgaaggaggaagagaac
aaaagacttagtcaaagactgatgtcccagagtatgtcgtccgtctcgtcacggcactcg
gagaaaatcgccattcgagattttcaggtgggcgacttggttctcataatcctggacgag
aggcacgataattacgttctcttcactgttggtcccaccctttatttcctgcattcagag
tccctcactgcactggacctcaaaccagcgacaggagctacaagacggccgtgggttctt
ggaaaagtcatggagaaggaatattgccaagccaaaaaggcccaaaaccggttcaaagtt
cctctcggcactaaattctacagagtaaaggccgtgccatggaacaagaaagtgtaa
DBGET
integrated database retrieval system
