KEGG   Carassius auratus (goldfish): 113042858
Entry
113042858         CDS       T07313                                 
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-4-like
  KO
K06245  laminin, beta 4
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113042858
   04518 Integrin signaling
    113042858
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113042858
SSDB
Motif
Pfam: EGF_laminin LAMB1 Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB4 TMP_3 F5_F8_type_C
Other DBs
NCBI-GeneID: 113042858
NCBI-ProteinID: XP_026057630
UniProt: A0A6P6JB39
LinkDB
Position
25:16705022..16724817
AA seq 1837 aa
MLFVFICKGPAMLIQLKTSAFLLLLIAAPVRLQDECVGNSCYPNLGDLMVGRAAQLKASS
TCGLYRAQKYCILGYLENEHKCFICDSRSPYSLHHNPKSHRIENIITTFQPERKMSWWQS
ENGVHEVSIQLDLESMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSF
PGVSEGPADSIDDLICDTRYSGAEPSTDGEVVLKALDPNFDIHDPYDPTIQDLITLTNLR
VNFTRLITLGDTFLMRRKRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDGARGDTFNE
PGMVHAKCVCQHNTAGFNCERCQDFYHDAPWRPGGKTDSDVCRRCYCHGHSEKCHFDLAR
YLATGGVSGGVCDDCRNNRAGPQCDLCGPYYYQDPQRSTHDPNACIPCECNPDGSMEGGL
CDPVTGQCVCKQNVEGERCDRCKSGFYGFSRVDPSGCQLCRCNFMGTIRTGNPCDQTTGT
CICEPFAFGPQCDQCLPGYWGLGNTVYGCLPCDCDIGGALRTECSPVDGQCECRPNMVGP
KCSEPAPGYFLAPLDFYIYEAEHAAPLLSISPFIQAPTLVYPPEKITVRPTKLPLCSSTP
KPFPRPYKATDPPTVKPSPTPYPYFTLPICEQYYRQRGYDFKISNGRVVVFKREKQRTRR
QGQRTIPFEPGSPLQIILRQRTPDRPITWTGPGFVRVQDGVGLRFNVRNIPATLDYYVVV
RYEPESTDDWTAIVNVVSFGSGDRSCLNDPSDKMFTLPASGRTATLDLPICLSDGNKYHV
DITFRKKPSADPQIISFILIDSMGLIPKVDSLPNLCTQSYLAQFQQYRCIELDAEAGQHT
LSEECEKLIGSMSAFIHNGAVSCNCHHVGAYASSCSKFGGQCQCKPNVIGRCCDSCTPLT
YGLGPDGCSPCDCDPSGSTAELCDQKTGQCSCREGVTARRCDKCYPGYYGFPLCRRCKCN
GLADICDLVTGDCLDCREHSTGPHCERCKDGYVGDPVSGHPCEPCLCPDLNGSGRFFAIS
CNKDPYSGAPYCECLPGHTGLNCDSCAHGYYGDLRFPGSRCEECCCNNNIDPRDGEACDA
VTGECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDWRGTDDTKCPAGSPCFCDQET
GQCPCRTSVKGTQCNECKDGYWNLDGESGCQPCNCDPEHALNYICDQITGQCLCQPEYGG
RKCDECGPNHFGNPYIQCMSCDCNMEGTIYPFCDPYTGECLCKPGVIGLFCDECAPGHDT
NFPACEPCHACYHLLEKTVSDVRLDIERIETIKPCPEDNRTTSELQYLWNLLKKLQSLAN
MTTKDELEKLEELLARIRNETETIDPHIIIIDPTILLNTDIDNIRLDFNILLKNLREKAK
EIPATDVKAINDILNKIKKLYEVFTDSEKKVQAAKKALEASRNTRKNATLELAKCPIGEM
DKLERKVKALSVASLNEKVCGAPGDAECDKAKCGGASCEICGGPACTGSLPLSLNTSKLA
EMTEKNITDLRRKLKEADRQLMDTSNMTDYIKDQAEDLMDKINQTKNKYEKEKIDTKNLI
EKLKNYLRDELVKPEDIEKLANAVLSIQLPKSPDEIKDMIEDIKRILANITHFDDDLEHL
EKQARIAEDMKERAQEILNRTKAINVGEIEKALNDTAKVNDKIFKDLNKAKENNDIIREK
VNETEPKLKNIEDNLDSTRAKKLLDEIKALENKTEMNRAQGKEAKDAANAVLDIAKDTEK
DLEELKEQFEKLKLNSTTQNVNEEANERLKNITIEAETLAKNVEDKMKEIEELEKKILDA
AKRKEETIKDLEALQKEADDLRNFIVDXVDKYNLCST
NT seq 5514 nt   +upstreamnt  +downstreamnt
atgctattcgtcttcatctgcaaaggtccagcaatgctgatccagttaaagacatcggcg
ttcctgctcctcttgatagctgctccagtccgcctccaggacgaatgtgtggggaattca
tgttatcctaacctcggtgacctcatggtgggccgcgccgcccagctcaaggcttcttca
acctgtggactctacagagcacaaaaatattgcatcctgggatacctagagaatgagcac
aagtgcttcatctgtgactccaggagcccctacagtctccaccacaatcccaaaagccac
cgcatagaaaacatcatcaccacgttccaacctgaacgcaagatgagctggtggcagtcc
gagaacggtgtccatgaggtcagcattcagttggatctggaatcaatgtttcagtttagt
catctgatattgacgttcaagagttttcggcctgctgccatgttggttgagaggtcgaaa
gacttcgggagaacctggaaggttttccgttactttgcggaggactgtgctaactctttc
cccggtgtctctgaggggccagcagacagtattgatgaccttatctgtgatactcgctac
tctggggcagagccgtccaccgatggagaggtggtgttgaaagccttggatcccaatttt
gacatccatgatccttacgaccctactatacaagatctgatcaccctgacaaacctgcga
gtaaactttacccgcttgatcaccctgggcgacacgttcctgatgcgacggaagaggaac
ccacaggataagtactattatgccctctatgagatggtggttcgggggagctgcttctgc
aatggccacgccagtcagtgcattcccgtggatggcgcacgtggagatacctttaatgag
cctggcatggtacatgctaaatgtgtttgccaacacaacactgcagggttcaactgtgag
cgctgtcaagacttctaccatgacgccccctggaggccaggtggaaaaacagactcggat
gtttgcagaaggtgttactgccatggtcattcagagaagtgtcactttgacttagcacgc
tatctggccactggtggggttagtggtggtgtgtgtgatgactgcaggaacaaccgtgct
ggaccccagtgtgatctgtgtgggccgtattactaccaggaccctcaacgctctacgcac
gaccccaatgcctgtataccttgtgaatgtaatcctgatggctcaatggagggtggtctg
tgtgatccagtgactggccagtgtgtgtgtaaacagaatgttgaaggagagcgctgtgac
cgctgcaagtctgggttctatgggttcagcagggttgaccctagtggctgtcagttgtgt
aggtgtaatttcatgggaactatacgtactggcaacccttgtgatcaaactactggaaca
tgcatctgcgagccatttgctttcggcccacagtgcgaccagtgtctgccaggttactgg
ggtctgggaaacacagtctatggctgcttaccctgtgactgtgacattggaggggcattg
agaaccgaatgttccccagtggatggccagtgtgaatgcaggcctaacatggtaggcccc
aaatgtagtgagccggcccctggatatttcctggcccctcttgatttctatatctatgag
gctgaacatgcagcacctctgttgtcaatttctccatttatacaagcccctacattggtc
tatcccccggaaaagataactgtccgaccaaccaagcttcctctctgctcctctacccca
aaacccttcccaagaccttataaagcaactgatcccccaactgtgaagccgtctccgacc
ccatacccctatttcacactacccatctgtgagcaatactacagacaaagaggttatgac
ttcaagatcagtaatggcagggttgtggtgttcaagcgtgagaagcagcgaactcgaaga
caaggccagaggacaatcccctttgaaccaggctcacctcttcagatcatcctgcgacag
cgcaccccagatcggcccatcacttggactggaccaggttttgttcgagttcaggatggg
gttggactaagatttaatgtcagaaatataccagctactcttgactactatgtagttgtc
cgctatgaaccagagtccactgacgattggacagctattgtgaacgttgtatcttttgga
tcaggggatagaagttgtctcaacgacccatctgataaaatgtttacacttccagcctct
ggaaggacagccacactggatcttccaatatgccttagtgatggtaataaataccatgtg
gacattacttttagaaagaagcccagtgccgaccctcagatcatctcattcattctgatt
gactctatgggcctcattcccaaagtggactcactcccaaacctctgcacgcagtcatat
ctagctcagtttcagcaataccgctgtattgagttggacgcagaggcaggacagcacacc
ctttctgaagaatgtgagaagcttattggaagtatgtcagctttcattcacaatggtgca
gtgtcttgcaactgtcatcatgttggagcgtatgcctcatcttgcagtaaatttggagga
cagtgtcagtgcaaacccaatgttattggtcgttgctgtgattcctgtactcctctgaca
tatgggcttgggccagatggctgctcaccatgtgactgtgatccgtctggctctaccgct
gagctttgtgaccagaaaactggtcaatgctcgtgtcgagaaggagtaactgctcgtcga
tgtgataaatgttaccctggttactacggttttcccctgtgcagaagatgcaaatgcaac
gggttggctgacatctgtgacctggtcactggagactgtctggactgcagggaacactcc
actggaccccactgtgaaaggtgtaaggatggttatgttggtgaccctgtttctgggcat
ccttgtgaaccatgtttatgtccagatttgaacggaagtgggcgcttctttgccatttcc
tgcaacaaagatccatactctggagctccatactgtgaatgtctgcctggacatacaggc
ctaaactgtgactcctgcgctcatggttactatggtgatctgaggtttccaggcagccga
tgtgaggagtgttgttgcaacaataacattgatcctcgcgacggtgaagcatgcgatgct
gtaactggcgaatgtttgcggtgcttacataacacagaggggccgcgctgtcagagttgc
aaacgtggatactatggcaatgcactcgctcaagactgcaaagagtgttcttgtgactgg
aggggcacagacgacaccaagtgtccagctggaagcccctgtttctgtgaccaggaaact
ggccagtgcccatgtcgcacaagtgtcaagggaacccaatgtaatgagtgtaaggatgga
tactggaacctggatggggagtctggttgtcagccatgtaattgtgacccagaacatgct
ctcaactatatctgtgaccagatcacaggccagtgtttgtgccagccagaatatgggggc
agaaaatgtgatgagtgtgggccgaatcactttggaaacccatatatacagtgcatgtct
tgtgactgtaacatggaggggaccatttatccattttgtgacccttacacgggcgagtgt
ttgtgtaagccaggagtgattggccttttctgtgacgaatgcgctccaggtcatgacaca
aactttcctgcctgtgaaccctgccatgcctgctaccacctcttggagaaaacggtctca
gatgttagactagatattgagaggatagaaactataaagccatgtcctgaagacaatagg
actacatctgaactacaatacttatggaatctgttgaagaagctgcagagtctggctaac
atgaccaccaaggatgagctagaaaaactagaggaactcttggcacgcattaggaatgaa
acagagaccattgacccacacataatcattattgatccaaccatactgctcaacactgac
atcgacaatatccgacttgacttcaacatactcttgaagaatctcagggagaaggcaaaa
gagattccagcgacagatgtaaaagctattaatgatattttaaataagatcaaaaagctc
tatgaagtattcactgacagtgagaaaaaagtgcaagcagctaaaaaggccctggaagcc
tccaggaatacgagaaagaatgctacattggaacttgctaagtgtcccataggagaaatg
gataagctggagaggaaagtgaaagctctgagtgttgccagcctcaacgagaaggtctgt
ggggctccaggcgatgcagaatgtgacaaggcaaaatgtggtggagcttcatgtgagatt
tgcgggggtcctgcctgtacagggagtttacccctcagcctcaatacctccaaactggca
gagatgacagagaagaacattactgatctgcgccgtaaactcaaggaagctgatagacag
ctcatggacacctcaaacatgactgattacatcaaagatcaagctgaggacctgatggat
aaaattaatcagactaagaacaaatatgaaaaggaaaagattgacaccaagaacctcatt
gagaagctcaagaactacctgagagatgagctggtgaaaccagaggacattgagaaactg
gccaatgctgtgttgtccattcagctgcccaaatcccctgatgagatcaaggacatgata
gaggacatcaagaggatcctggcaaacatcacacacttcgacgatgatctagagcacttg
gaaaaacaagccagaattgctgaagacatgaaggagagggcccaagaaatcttgaacaga
accaaggctatcaatgtgggggagatagagaaagcactcaacgatacagcaaaggtcaat
gacaagatattcaaggatctgaataaggctaaagaaaacaatgacattatcagggagaaa
gttaatgagactgaacctaaactaaaaaatattgaggataatttggattcaactcgtgcc
aaaaagttactggatgaaatcaaggccttggagaataagacggagatgaacagagctcag
gggaaggaggccaaagatgctgccaatgcagtgcttgacattgccaaagacaccgaaaag
gatcttgaggaattgaaagagcagtttgaaaagttaaaactgaatagcacaacccagaat
gttaatgaagaggctaatgaacgtctgaagaacatcacaatagaggcagaaacactggct
aaaaatgtggaagataaaatgaaggaaattgaagaattggagaaaaagattctggatgca
gctaaaaggaaagaggaaacaataaaagatttggaggcactccagaaggaagcagatgac
ttgaggaactttattgttgacnnagtggataaatacaatctgtgctccacttaa

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