Carassius auratus (goldfish): 113042881
Help
Entry
113042881 CDS
T07313
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113042881
09122 Translation
03013 Nucleocytoplasmic transport
113042881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113042881
03041 Spliceosome [BR:
caua03041
]
113042881
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113042881
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113042881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
PUB2_N
DUF2542
Motif
Other DBs
NCBI-GeneID:
113042881
NCBI-ProteinID:
XP_026057664
Ensembl:
ENSCARG00000012790
UniProt:
A0A6P6JBA3
LinkDB
All DBs
Position
25
Genome browser
AA seq
705 aa
AA seq
DB search
MSSDAVKKRKPKFIRNEAGTPETKRGRAEGDQVTHPAGPRLIGQRKLITAKNQDVRVYNE
EVELEDRDPQQDYMLYKDTCADLAKLMAEIQELKSGGAKVGSVEIEERHRQCSIHFITLK
KLNRLAHMRLKKGRDQTHEAKQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSQHEEIEL
VSEEEFFQEAPAEISRPHVTRDDQHQLTLARLDWELEQRKRLAEQYKMSLARKEKIQKAI
EQKREYLSSLQPGLHNIMQASIPVQEYLSMPFEQMQKQAEVARHLPPALYVLMVQAAAYG
QACDKTLSVNITGDVDEAKALSRRPEDSQDDESDSDAEEEQQNTKRRRATVGIQLEDKRK
EMLRRHPLSLCVDLKCKDGSILHLFFCYLMNLNILTVKTKVSTAVDLSGAVSAGELLNSE
SLLNCLYASDHGKETPNPVNRYQFDKVGITTFADYVSDLGHPYVWVQKLGGLQFSSDGAQ
SELSGSALSASHMERTMKLLRGRLQARLALHKQFSSLEHSIIPVSSECQHLFPAKVVSGL
TRWTMMSYQEFTELGFVQHVLKAGLVCETDLFFMAVVERGTARLSAAVVVNPRYPEVMPL
FSLSLHWKGERSGRTEDNLRAMESEVNVFRAELQGPRPGLQLLTNQIQRLCVCLDVYLET
ESQVCDGSEGPKEFPREKMCLRTARGPSRLKPFKYNHPQGFFSHR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgacgctgtgaagaagagaaagccgaagttcatccgaaatgaagcaggaact
ccagagaccaagcgaggtcgagcggaaggagatcaggtcacgcatccagccggacctcgt
cttattggacagaggaagctgattacagcaaagaatcaggatgtccgtgtgtataatgag
gaggtggagctggaggacagggacccgcagcaggactacatgctgtataaagacacgtgt
gccgatctggccaaactgatggcagaaatacaggagctgaaatccggtggcgccaaagtc
ggaagtgtagagatcgaggagagacaccgacagtgcagcattcatttcatcactctgaag
aaactcaaccgcctggcgcacatgcggctgaagaagggcagagatcagacacatgaggcg
aagcagcgagtggatgttcttcatttgcagctgcagaatctgttgtatgaggtcatgcac
ctgcagaaagagatcagcaaatgtctcgagttcaagtctcagcatgaggagatcgagttg
gtcagtgaagaggagttttttcaggaggctccggctgagatttcacgacctcatgtcact
cgtgatgaccagcaccagctcacgctcgcccgcctggactgggaactggagcagaggaag
aggctggcggagcagtacaagatgtctctggctagaaaggagaagatccagaaagccatt
gagcagaagagagaatatctcagcagccttcaacctggactgcataacatcatgcaggcg
tctatcccagtgcaggagtatctgtcgatgccgttcgagcaaatgcagaagcaggcagag
gtcgcccgtcacctgccacccgctctgtacgtgctgatggtccaggcagctgcgtacgga
caggcttgtgacaaaaccctgtctgtgaacatcaccggagatgtggatgaggccaaagct
ctctccagacgaccggaggactcgcaagatgatgaaagtgattcagacgctgaagaagag
caacagaacacgaagcgccggcgagccactgtcggcattcagttggaggacaagcgtaaa
gagatgctgagacgccaccctctctcgctctgcgtggaccttaagtgtaaagacggcagc
atcctgcatctgtttttctgttatctcatgaatctcaacattctgactgtgaagaccaaa
gtttccaccgctgtggatctgtctggagcagtcagtgctggagagctgctgaactcggag
agtctgctgaactgtctctatgcatctgatcacggaaaagagacacccaaccctgtcaac
cgctaccagtttgataaagtcggaatcactacatttgcagattatgtgtcagatctcgga
catccgtatgtttgggtgcagaagctgggtggcctgcagttctcatctgatggtgcacag
tcggagctgagcggcagcgctctgagcgccagtcacatggagaggaccatgaagctgctg
cgaggaagactgcaggcccgactggccctacacaaacagttcagctcgctggagcacagc
atcattcccgtctccagcgagtgccagcatctgtttcctgctaaagtggtttccggtctc
acgcgctggaccatgatgagctaccaggaattcaccgagctgggcttcgtgcagcatgtg
ttgaaggccggtctggtgtgtgagacggatctgttcttcatggcggttgtggagagagga
acagctcgtctgtcggctgctgtggtggtgaacccacgttacccagaggtcatgcccctc
ttctctctctctctgcactggaaaggagagcgcagcgggcgcactgaggataacctgcgg
gcgatggagagcgaggtgaacgtgttccgggccgagctgcagggtccacgtccgggtctc
cagctcctgaccaatcagatccagcgcttgtgcgtgtgtctggatgtgtatctggagacg
gagagtcaagtgtgtgacggctctgagggaccaaaggagtttcccagagagaagatgtgc
ttgcgtactgccaggggtcccagtcgtctgaagcccttcaagtacaatcatcctcagggc
ttcttcagtcaccgctga
DBGET
integrated database retrieval system
