Carassius auratus (goldfish): 113042910
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Entry
113042910 CDS
T07313
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113042910
09122 Translation
03013 Nucleocytoplasmic transport
113042910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113042910
03041 Spliceosome [BR:
caua03041
]
113042910
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113042910
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113042910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
PUB2_N
DUF2542
Motif
Other DBs
NCBI-GeneID:
113042910
NCBI-ProteinID:
XP_026057704
Ensembl:
ENSCARG00000014298
UniProt:
A0A6P6JBD3
LinkDB
All DBs
Position
25:complement(764879..775347)
Genome browser
AA seq
685 aa
AA seq
DB search
MVMSSDAVKKRKPKFIRNEAGTPETKRRAEGDQDVRVYNEEVELEDRDPQQDYMLYKDTC
ADLAKLMAEIQELKSGGAKVGSVEIEERHRQCSIHFITLKKLNRLAHMRLKKGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSQHEEIELVSEEEFFQEAPAEISRPHVT
RDDQHQLTLARLDWELEQRKRLAEQYKMSLARKEKIQKAIEQKREYLSSLQPGLHNIMQA
SIPVQEYLSMPFEQMQKQAEVARHLPPALYVLMVQAAAYGQACDKTLSVNITGDVDEAKA
LSRRPEDSQDDESDSDAEEEQQNTKRRRATVGVQLEDKRKEMLRRHPLSLCVDLKCKDGS
ILHLFFCYLMNLNILTVKTKVSTAVDLSGAVSAGELLNSESLLNCLYASDHGKETPNPVN
RYQFDKVGITTFADYVSDLGHPYVWVQKLGGLQFSSDGAQSELSGSALSASHMERTMKLL
RGRLQARLALHKQFSSLEHSIIPVSSECQHLFPAKVVSGLTRWTMMSYQEFTELGFVQHV
LKAGLVCETDLFFMAVVERGTARLSAAVVVNPRYPEVMPLFSLSLHWKGERSGRTEDNLR
AMESEVNVFRAELQGPRPGLQLLTNQIQRLCVCLDVYLETESQVCDGSEGPKEFPREKMC
LRTARGPSRLKPFKYNHPQGFFSHR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgtcctccgacgctgtgaagaagagaaagccgaagttcatccgaaatgaagca
ggaactccagagaccaagcgtagagcggaaggagatcaggatgtccgtgtgtataatgag
gaggtggagctggaggacagggacccgcagcaggactacatgctgtataaagacacgtgt
gccgatctggccaaactgatggcagaaatacaggagctgaaatccggtggcgccaaagtc
ggaagtgtagagatcgaggagagacaccgacagtgcagcattcatttcatcactctgaag
aaactcaaccgcctggcgcacatgcggctgaagaagggcagagatcagacacatgaggcg
aagcagcgagtggatgttcttcatttgcagctgcagaatctgttgtatgaggtcatgcac
ctgcagaaagagatcagcaaatgtctcgagttcaagtctcagcatgaggagatcgagttg
gtcagtgaagaggagttttttcaggaggctccggctgagatttcacgacctcatgtcact
cgtgatgaccagcaccagctcacgctcgcccgcctggactgggaactggagcagaggaag
aggctggcggagcagtacaagatgtctctggctagaaaggagaagatccagaaagctatt
gagcagaagagagaatatctcagcagccttcaacctggactgcataacatcatgcaggcg
tctatcccagtgcaggagtatctgtcgatgccgttcgagcaaatgcagaagcaggcagag
gtcgcccgtcacctgccgcccgctctgtacgtgctgatggtccaggcagctgcttacgga
caggcttgtgacaaaaccctgtctgtgaacatcaccggagatgtggatgaggccaaagct
ctctccagacggccggaggactcgcaagatgatgaaagtgattcagatgctgaagaagag
caacagaacacgaagcgccggcgagcgactgtcggcgttcagttggaggacaagcgtaaa
gagatgctgagacgccaccctctctcgctctgcgtggaccttaagtgtaaagacggcagc
atcctgcatctgtttttctgttatctcatgaatctcaacattctgactgtgaagaccaaa
gtttccaccgctgtggatctgtctggagcagtcagtgctggagagctgctgaactcggag
agtctgctgaactgtctttatgcatctgatcacggcaaagagacacccaaccctgtcaac
cgctaccagtttgataaagtcggaatcactacatttgcagattatgtgtcagatctggga
catccgtatgtttgggtgcagaagctgggtggcctgcagttctcgtctgatggtgcacag
tcagagctgagcggcagcgctctgagcgccagtcacatggagaggaccatgaagctgctg
cgaggaagactgcaggcccgactggccctacacaaacagttcagctcgctggagcacagc
atcattcccgtctccagcgagtgccagcatctgtttcctgctaaagtggtttccggtctc
acacgctggaccatgatgagctaccaggaattcaccgagctgggcttcgtgcagcatgtg
ttgaaggccggtctggtgtgtgagacggatctgttcttcatggcggttgtggagagagga
acagctcgtctgtcagctgctgtggtggtgaacccacgttacccagaggtcatgcccctc
ttctctctctctctgcactggaaaggagagcgcagcgggcgcactgaggataacctgcgg
gcgatggagagcgaggtgaacgtgttccgggccgagctgcagggtccacgtccgggtctc
cagctcctgaccaatcagatccagcgcttgtgcgtgtgtctggatgtgtatctggagacg
gagagtcaagtgtgtgacggctctgagggaccaaaggagtttcccagagagaagatgtgc
ttgcgtactgccaggggtcccagtcgtctgaagcccttcaagtacaatcatccgcagggc
ttcttcagtcaccgctga
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