Carassius auratus (goldfish): 113042928
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Entry
113042928 CDS
T07313
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113042928
Membrane trafficking [BR:
caua04131
]
Protein recycling
Others
Others
113042928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
113042928
NCBI-ProteinID:
XP_026057771
Ensembl:
ENSCARG00000008564
UniProt:
A0A6P6JCA9
LinkDB
All DBs
Position
1:complement(5403781..5546538)
Genome browser
AA seq
1240 aa
AA seq
DB search
MERGIGFCRVNVFSTLILVLFAWVPVTKTVITCRSCHLLDKWSGRELLVRMDSGVDFGKV
SDKNGDGSLALFNSAGAETGQADCSATDNCVHAHSLRKRNTDRLPSEKKLRNDKWKSMRS
TGKVYNLKRSGSKGSAPGDPHHRVRRSTQGLDSPPGARLPPSLGNSTARDARRVPRSELR
WNREERRSATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGSV
TESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEG
ATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWSK
LGLDKEPGLIHLETSISETEALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQV
STGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSE
AGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTHITYNKGRDWR
LLQAPSADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIDSRETSPGIIVASGSVGAELT
SSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWNK
YSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVAWD
LHDQGERCLMGVKRVYRKLKPIARCVMGKTYSVTTISEPCDCTESDFECDYGFERRADGK
CTPAFWFLPSSMSRTCITEHTFLNSTGYRKVVSNNCSGGVMEQYTARRQLCSSQAPRGLH
LVTSEGKLTATLASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYKN
VGIYRVSATAENSLGSETVLLFLHITCQLESIHLSAPFVAVKNKEVNLTVVLSPSQVGTV
TYIWWFGNNSEPVITLEGSVAFTFSREGSSVVTVQVSAGNTILQDRKTISVHEYFRSQLL
AFSSNLDDHNPDVAEWRLDVSRVIKTSMVQATGVNSDQLLVTVLPGLPTAAEFFLLPDKQ
LTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQITVYAAHLSAAPLVDTSENHSG
SAMLMLLSVVVVGLAVFLIYKFKRKIPGLHIYAAMQDEKEQEMIQSPVSPTDSTPSFSSQ
RELLTSLEPLDTEPNTQTIECISPHPRVKFSSDLPTYIDV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaatcggattttgccgggttaatgttttcagcaccctgattttggtattg
ttcgcttgggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctgctggat
aagtggagcggtcgggaattactggtgaggatggacagtggtgtcgattttggtaaagtt
agtgacaaaaatggagacgggtcattggcgctgttcaattcggctggtgctgaaactggt
caagccgactgcagcgcaactgacaactgcgtacacgctcactctctgcgtaaaaggaat
acagacaggctcccctcggagaaaaagctacgcaatgataaatggaagtcgatgcgcagt
actggcaaagtttataacctcaaacgttcaggttcaaaaggttcagcccctggagatccc
catcaccgagtgcgtagaagcacccagggactcgactcgcccccaggtgcgcgcttgccg
ccgtctttgggcaacagcaccgcgcgggatgcgcggagagtcccccgctctgagctgaga
tggaacagggaagagcggagatcggccacatcgcgacaggaggagctgaaacttaccagc
tctaccttcgcgctcactggggattccgctcacaaccaagccatggtgcactggtccggc
caaaacagcagcgtgattctcatgctgaccaagctatatgacttcaatctgggcagtgtc
acagagagctccttatggaggtcaacagattacggaaccacttacgagaaactcaatgaa
aaagtgggcgtaaagaccattctcagctatctatatgtcagccccaacaacaagcgcaag
atcatgttgctgacagatccagaggtggagagcagtttgctcatcagctcagatgaaggt
gcaacttatcaaaaatatcgcctcaacttctacatcctcagcctgttgtttcaccctgag
caggaggactggatccttgcctatggccatgaccaaaagctctacagctctgttgagttt
ggccgtcgatggcagctcgttcatgagcgggtagcacccaatcgattctactggtctaaa
ctgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagagaccgag
gctctttatgtcacatgcaagcttcagaactgcacagatgccaacaagggcaaacctttt
cctggatacatcgaccccaactccctggtggtccaagatgagtatgtgtttgtccaggtg
tcaactggtggccggccaatctactacgtgtcatccaggcgagatgtgtttacacccatg
aagcttcccaaatacacccttccaaaggatctgcatgtgatcagtacagatgagaaccgg
gtcgtggcagcagttcaagagtggaaccagaatgacacttacaacctgtatgtgtcagag
gccggaggcatttactacacgctagcactggagaacgtcatgagcagtatgggaccagag
ggaaatgtcatgatagatctatatgaggtggcaggaataaaaggcatgttcttggccaat
aagaagctaaataatgaggtgaagacacacataacctataacaaaggccgcgactggagg
ctcctgcaggctccctcggcagatctcagaggaaacagaatccattgcatgctgccatac
tgctctctgcatcttcacctgcacgtatctgcaaacccatacacatctggaaatatagac
agcagagagacatcccctggaatcatagtggcatcaggttcagttggcgcagagttaacg
agcagcaatgttagcatgttcatcacatccgacgctggaaacacgtggcggcagatattt
gacgaagagtacagtgtgctgtatctggatcaaggcggagctttagtggcaattagacac
acccctcttcccatcaggcacctctggctgagcttcgatgaggggagggtgtggaacaaa
tacagtttcacttcatcgcctctgttcgtggacggcgtcttgggcgaaccaggcgaggaa
acgcttataatgacgatcttcggtcacgtcagtcaccgctcagaatggcagctggtaaag
atagacttcaggtctatctttaacagaagatgcatcgagtctgactatgtggcgtgggat
ttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtctaccgaaagctgaag
cccatagcaaggtgtgttatgggtaaaacctactcagtcacaacgatttccgagccatgt
gactgcactgagtcggactttgagtgtgattatggcttcgagagaagggctgatgggaaa
tgtaccccggcattctggttcctcccctcctccatgtctcggacctgtattacagaacac
acgttcctcaacagcaccgggtacagaaaggtggtgtctaataactgctccggtggggtg
atggagcagtacacggctcgtaggcagctatgctccagccaggcccctcgcggcctccac
ttagtgaccagcgaagggaagctaacggcgactctggccagcaacgtcaccttcctcgtc
ttcctggaggagggggatggatcgaaaaccagcataacggtggatttcggcgatggaaac
gctttcacctactccaacgtgagctctatcgaggacggcattaaacacatctacaagaac
gtgggaatctaccgagtgtcagccacggcggagaacagtctgggctcggaaactgtgctt
ctattcctacacattacatgtcaactggagtctattcatctctccgctccttttgttgct
gtgaaaaataaagaagtcaatctgacggtggttctctcgccaagccaagtgggaaccgtc
acctatatctggtggtttgggaacaattcggagcccgtgatcacgctggaggggagtgtg
gcgttcacgttctctcgagagggaagcagtgttgtcactgtgcaggtgtccgctgggaat
accatcctgcaagacaggaaaaccatctctgtccatgaatacttcagatctcaacttctt
gccttttcatctaatctggatgatcacaaccctgatgtggctgaatggaggcttgatgtg
agtcgagtcattaaaacctctatggtgcaggcgacaggggtgaattcagaccagctgttg
gtcactgtgttgcctggactgccaacagcggccgagttcttcttgttaccagacaaacag
ctaacagaagggaaaccagacaaaaccgctacccatttagaccagctctcagaactggtt
ctcagtgctctcaatcagaatctggttcagttcacactcagaccaggagtccagatcaca
gtatacgctgcccatttatcagcagcgcctctagtggacacaagcgagaatcacagtggc
tcagctatgctcatgctcctgtctgtggtggtggtgggtttagctgtgttcctcatctat
aaattcaaaaggaagatcccaggcctccacatctatgcagcgatgcaggacgaaaaagag
caagaaatgatccagagtccagtttcacccactgacagcacacccagcttcagctctcag
agagagctgctcacatcactggaacctctggacacagagcccaacacccagaccatcgaa
tgcatcagtcctcatccacgtgtcaaattctcatcagatcttcctacatacatcgacgtt
tga
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