Carassius auratus (goldfish): 113042936
Help
Entry
113042936 CDS
T07313
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113042936
09124 Replication and repair
03420 Nucleotide excision repair
113042936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113042936
03400 DNA repair and recombination proteins [BR:
caua03400
]
113042936
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113042936
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113042936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
113042936
NCBI-ProteinID:
XP_026057743
Ensembl:
ENSCARG00000019192
UniProt:
A0A6P6JDY3
LinkDB
All DBs
Position
25:1052174..1060598
Genome browser
AA seq
551 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLILHTGESTTFHFSNGSTALKDRDATKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNTVEHSLSNNNNKQEVGISAAFLADIRPQTD
GCNGLRYNLTSDIIESVFRTYPTVKQKYAENVPHNMTEKEFWTLFFQSHYFHRDRISTGQ
QDIFSECAKQDEKGQKSMVTQGVKNPMVDLLLLEDKTLDEGYGTASVPTPSNSSNKSLRE
NSNSAIIKRFNHHSAMVLAAGLRKGEAPSDQASETSSTDGNSRDSDFFQPSLKKVKLQES
IEYDDLQGDSGRKTIALNLKKSDRYCHGPIPLQSQHYNTSQDIINSISIIQQEMRRYKPC
LTQVMSSSAASSAITALSPGGLLMQGRGQQAINQLVPADVQSELKHLYTAAGELLRHFWS
CFPVNTPFLEDKVVKMKSNLERFQMTKLRPFQEKIQRQYLSANLTGHLEEMFQAAYSKFQ
VWQTRRMMRKT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtccgaggaggtgttgttggtggtgaagaaggtccgtcagaggaagcag
gacgggactctgtacctgatggccgagcggatcgcctggggtcctgaagggaaggaccgc
ttcacagtcagccacctgtatgccgacatccgctgtcagaagatcagtcctgatgggaag
gcaaagatccagcttcagctgattctgcacacgggagaaagcaccacttttcatttctcc
aatgggagcacagcactgaaggacagagacgccaccaaagacctcctgcagcagctcctg
cccaagttcaagaagaaagctaacaaagagctggaggagaagaacaggatgttgcaggaa
gaccctgtcctcttccagctctataaggacttggtggtgagtcaggtgatcagcgctgag
gagttctgggccaatcggctgagcctgaatactgtggaacactccctctccaacaacaac
aacaaacaggaagtgggcatttctgctgccttcctggccgacatcagaccgcagacagac
ggctgcaacggcctgcgctacaatctgacctctgacatcatcgagtctgtcttcagaacc
taccctacagtcaagcagaaatacgctgagaacgtccctcacaacatgacggagaaggag
ttctggacgctgttctttcagtctcattacttccacagagaccggatcagcacgggccag
caggacatcttctccgagtgtgccaaacaggacgagaagggccagaaatcaatggtgacc
cagggagtgaagaaccccatggtggatctgcttttactcgaggataaaacattagatgag
ggttatgggacagcatcggttcccactccatcaaactcatccaacaaatcactgagagag
aacagcaactctgccataatcaagcgcttcaaccatcacagtgccatggtgctggcggcc
ggcctacgcaagggggaagctcccagtgatcaagccagtgagaccagcagcactgatggg
aactccagagattcagatttctttcagccgtcactcaaaaaggtaaagttacaagaatcc
atagagtatgatgaccttcagggggactctgggcggaagaccatcgctctgaacctgaag
aaatcagaccgatattgccacggcccgattcctcttcagtcacagcattacaacaccagt
caagacattatcaactccatcagcattatccagcaggagatgaggagatataaaccctgt
ctgacgcaggtgatgtccagcagtgcggcgagctcagccatcacagcgctgtcacctgga
ggacttctgatgcagggacgaggccagcaggccataaaccaattagtgccagctgatgtt
cagagcgagctgaagcacttatatacagctgccggagagctgctccgacatttctggtcc
tgtttccccgtcaacacccccttcctggaggataaggtggtaaagatgaaatctaacctg
gagagattccagatgacgaagctccgcccctttcaagaaaagatccaacggcagtatttg
agtgcgaatctaacaggccacctggaggaaatgtttcaggctgcgtacagcaagtttcaa
gtctggcaaacgcgtcgaatgatgagaaaaacctga
DBGET
integrated database retrieval system
