Carassius auratus (goldfish): 113042956
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Entry
113042956 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1a-like
KO
K06759
contactin 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113042956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113042956
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
caua00537
]
113042956
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
Contactins
113042956
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
caua00537
]
Others
113042956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_5
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
113042956
NCBI-ProteinID:
XP_026057780
Ensembl:
ENSCARG00000008432
UniProt:
A0A6P6JBG9
LinkDB
All DBs
Position
25:1413691..1965322
Genome browser
AA seq
1037 aa
AA seq
DB search
MIAAAIQPRAMTHTSCCVLLSIMLTLTCHFWSVCADFPAVFGDESSGFGPVFEEQPVDTI
YPEESSEDKIIMSCRTRANPAATYRWRLDNTEVVIGSDDHYSLMGGNLVINFPDKSKHAG
NYSCVASNEFGTLVSQRASVQFGYLDMFSSDEREAVYVKEGQGAVLLCAPPPHFPEDLSF
RWMLNEFPEFIPLDKRRFVSQTTGNLYISTVRASDSGNYSCFVSSPSIAKSVFSKFIPLV
PIAERSLRKYPADIKVKSPDTYTLLGQNITLECFALGNPIPQIRWRKVDGDLPVQRHNIS
MSGSLLHLYDIQYEDEGLYECEADNSKGKDRHKVHLYVEGAPEWLEKISSSERDIGGDYI
MSCLASGKPKPHVHFLKNGRMYAKNHELRFTDLTFDDSGMYQCIAENRHGTIYANAELRV
FAGAPSFERNPVKPKLLGAKXGRVVIDCKPRAAPRPSISWSKGSELLHNSSRIFIRPDGS
LELLNITRSDEGEYTCSAENERGRANSSGSLSVTDATKISLALSSADISVGQSTRMQCAA
SHDPSLDLSFIWSLDTHLIDFDRDREHYENKMVVNQDGTSSSELLISNTQLRHAGRYSCT
AQTPVDNITASAQLLVRGPPGPPVGVRVDEVMTSSVRVTWSHGTDNLSPISKYSVQYRDV
RAQQDWRDASTSPVDVEGSADMVSVVNLTPWTEYEFRVIATNTLGTGPPSDPSPRITTRE
TRPVVSPSDIAGGGEASRELTITWTPVQPQYYYGSNFGYIIAFKPHNDPEWMRVTVTDPQ
ARKYVHKDPKIPPSTRFEVKMKVFNSQGEGPFSVSSFIYSSQDVPAEAPSIIEARTLSAT
EAVVSWIPLQLQTVEGYQVRYWRESVENEASAQRVLVSSGENHTRLDNMKPSSHYLIEVR
AYNGAGYGPSSQRRKIHTRRAPPSRPPKIIGTKLSYSGTNINIAWEQVEPLANESTVEGY
KVLYRPEGQPSGSLYTTVKQSIDLPMKKGDYLVEVRAYSEGGDGAVAQVRIAGAAGLASP
SLGFFWLLLTVLLGLIL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgcggccatccagcccagagccatgacccacacttcctgctgcgttctgctg
agcatcatgctcacgctcacctgccatttttggtcagtgtgtgcagatttcccagcagtt
tttggagacgagtcgtcaggattcgggcctgtgttcgaggagcagcccgtcgacaccatt
taccctgaagagtcttcagaagacaagatcatcatgagctgcaggacacgagcaaaccca
gcggccacgtacaggtggaggctggacaacacagaggttgttattggaagtgatgatcac
tacagcctgatgggaggaaacctcgtcatcaacttccccgacaagagcaagcatgctggg
aactactcgtgtgtggccagcaatgagttcgggacgctcgtcagtcagagagcctctgtt
cagttcggatacctggacatgttttcctcggacgagcgggaggcggtctatgtgaaggag
gggcagggggcggtgcttctgtgtgctccgcctccacacttcccagaggatctgtccttc
cgctggatgctcaatgagtttcctgagttcattcctctggacaagcggcgcttcgtgtct
cagaccaccgggaacctctacatctccaccgtacgagcgtcagacagcgggaactactcc
tgcttcgtctccagtccctccatcgccaagagcgtcttcagcaagttcatcccgctggtg
cccatcgccgagcgttctctgaggaaatatcccgctgatatcaaagtcaaatctccagac
acgtacacgctgctggggcagaacatcacgctggagtgcttcgctctgggaaaccccatc
cctcagatccgatggaggaaggtggatggtgatctgccggtccagcgccacaacatcagt
atgtcaggaagtctccttcatctttatgacatccagtatgaggacgagggtttatatgag
tgtgaggccgacaactccaaaggcaaagacagacacaaagtgcatctgtatgtggaggga
gctcctgaatggctggagaagatcagcagctcggagagagacatcggaggagattacatc
atgtcctgtctggccagcgggaaacccaaaccacacgtgcacttcctgaagaacggacga
atgtacgccaagaaccacgagttgcgtttcacagacctgacatttgatgattcagggatg
tatcagtgtatcgctgagaaccgtcacggcacgatatacgccaacgccgagctgcgggtg
ttcgccggcgctccttcatttgagaggaacccagtgaaacccaaacttctgggggccaaa
nacgggcgcgtggtgattgactgcaaaccccgagcagcgccccggccgagcatctcctgg
agcaaaggaagtgagctcctgcacaactccagcaggatcttcattcggccggacgggagt
ctagagcttctgaacatcaccagatcagacgaaggtgaatacacctgttcagcagagaac
gagcgcggccgagcgaacagcagcggatctctgtcagtcaccgacgccacgaagatctct
ctggccctgtccagcgctgacatcagcgtaggccagagtaccaggatgcagtgcgccgca
tcacatgaccccagcctcgacctcagcttcatctggtccctcgacacacacctcatcgac
ttcgaccgagacagagagcactacgagaacaaaatggttgttaatcaggatgggacgtcc
agctcagagctgttgatcagtaacacacagctgagacacgccggacgttacagctgtaca
gcacagacgccggtggacaacatcacggcctccgcgcagctgctggtcagaggtcctcct
ggtcctcctgtaggtgtgcgtgtggacgaggtgatgaccagcagtgtgagggtcacctgg
agtcacggcacagataacttgagtcccatctccaaatacagcgtccagtacagagacgtg
cgagcgcagcaggactggagagacgcctccacctctccagtggatgtggagggatctgca
gacatggtcagcgtggtcaatctgacgccctggacagagtatgagttcagggtcatcgcc
accaacacactgggcaccggaccccccagtgacccctcgcccagaatcaccaccagagaa
accaggccggttgtgtctccgtcagacatcgctggaggaggagaagccagtcgtgagctc
accatcacatggacgccggtccagccacagtactactacggcagtaattttggctacatc
atcgccttcaagcctcataatgaccccgagtggatgagggtgacggtgacagatccacag
gcacgaaagtatgtccacaaagacccgaaaatccccccgtccaccaggtttgaggtgaag
atgaaggtcttcaacagtcagggtgaagggccgttcagtgtcagctccttcatctactcc
tctcaggatgttcctgcagaagctcccagcatcatcgaggcgaggacgctgtccgccaca
gaagccgtcgtgtcctggatacctctacagctgcagacggttgaaggataccaggtccgg
tactggagggagtcggtggagaacgaggcgtctgcgcagcgtgttctggtgtccagtgga
gaaaaccacacgcgtctggacaacatgaagcccagctcacattacctgatcgaggtgcgg
gcgtacaatggtgctggatacggaccgtccagccagcgccgcaagatccacaccaggaga
gcacctcctagtcggcctcctaaaatcatcggcacgaagttgagctacagcggcacaaac
atcaacatcgcctgggagcaggtggagccgctggccaacgagtcgacggtggaggggtat
aaggtcctgtacaggccggaggggcagcccagcgggtcgctgtacaccacagtgaagcag
tccatcgatctgcccatgaagaagggtgattacctggtggaggtgcgtgcgtacagcgag
ggaggagacggagccgtcgcacaagtgcgcatcgcaggtgcggccggtctggcgtctcca
tctctcggcttcttctggctgctcctcacggttctgttgggtttgattctctga
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integrated database retrieval system
