Carassius auratus (goldfish): 113042994
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Entry
113042994 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113042994
Transcription factors [BR:
caua03000
]
Eukaryotic type
Other basic domains
RF-X
113042994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
113042994
NCBI-ProteinID:
XP_026057839
UniProt:
A0A6P6JBQ8
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All DBs
Position
25:3066370..3073309
Genome browser
AA seq
1451 aa
AA seq
DB search
MSSSRTQQMYAFNWIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNV
FPNMKARRLGMRGKSKYCYSGLRKKAFVHMPSLPNLELHKSGDGCELLESTGQSPSAEDE
MRSAACGLVCEWAQKVLSRQFDSVEELARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTP
ASAFVPTGEANSFQPQVKTLPSPSVDAKQQLQRKIQKKQQEQKLTSPLPTDAQARRAEAG
TPGPGSSLTSGSPALLSPQPTIGIVVTAVPSPITVQRSRQLMTSPSPVGAAEGKVVPVNF
QVVTQPVKQSPKTPQNIPASPVGDRLARHRYAQILPKPSATSAIALRSPPTLLITNSPIK
TVMPTPHVSSVNVVKMTAISLAPNSSSSSISTPTPLRPASAGVSSTASLEDSSQTHQAQN
GASVMSLQSSGKAGRTSTTLTPSVSTVTNEVKVTFEAVNDSNLATAVDKQSTASGASTGL
KNERATKFRASSEPSFFIKASPVPERVARAKSDSTTPSNTIMGALAPSSNNNNDQPERTL
YLTVTSQNVDAELSSICAVATASTSSKDAGLGPKSPRKRSASVLETHAIPVKRVFISQQP
LDVSSNAKPGIVIAAKKIQRPGTSARPESAPCKVTLKPSSSFPTQILALSDTPIGALDAS
QTVNPQSSSQIENEVANISPNETASGNSTTLMPQIPSHQQISSDVSQEVSAVSELKSSLQ
DYSQQMQVEHKQIAANPLPLMAQATETNSQLTLQQDIVDFARAQASMDYFPFNDDDMTQD
SIVEELVQMEEQMKLNSSLQSYLSCVDISLQGQSTVGQGTILSPHQTSTQFYHSSHSSAT
PIHTPTPTPTPTPTPTPTPTSEMLPGGSLLDQRKPCSRMAPVTPVDSILGGRHTPISTPL
SNCSSSVPPSPIECRNPFAFTPINSSITGYHDGSVVSSSPVKPMQRPMATHPDKAKLEWI
NNRYNSTAGSPVISTSSTIGILPSYQDLVEDHFRKPHAFAIPGQSLQCQSRHQDGNLGRL
TTVSPVQQGQQTTLSSKQESFAVPAPLDSKGTGSTSASAGGTFRCRSVSPAVRQRNLSGT
TAQTVTTPRSVVSPFNCPLTSEVLNILSNNQSVVSASSLAQRSQSVPLNIMMQSELLPVS
HQAQQSNSAKITTVLLSKMDTDGDDTVRGLGVNNLPANYTARMNLTQILETTQGFSGGAN
SQNQQLPLDSSPSPFDFQKTGYLISTGEEQVTFSSGDSQAQSGSGLQQPEEQLQLQDPQL
ELQNQQLQLQNQQLQLPAQQLQLQDQQLQLQEPQLQLQDQQMQLQDQQPLRDDPDLSQQH
LLPQTSQQVVDQEQQEQLDFNTTVKDLLGEDSLNPSSQLVGQVASELSAVASEFSSDIRL
TSDLSNSINDLNTLDPNLLFDPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLE
NKDQPTVEMLG
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagccgaacccaacagatgtatgcgttcaactggatccgaaatcacttggaa
gagcacccggaaacctcactgccaaaacaagaggtgtacgatgaatacaagagttattgc
gacaatctgggctaccatcctttaagcgcagctgattttggaaagatcatgaagaacgtt
tttccgaacatgaaggcacgccgtttgggcatgagggggaaatcaaagtactgctacagc
gggctgagaaaaaaagcatttgtgcacatgccgtcactccctaacttggagttgcacaaa
tcaggagatgggtgtgaattgttggagtcgactggacagtctcccagtgctgaggatgag
atgcgttcggcagcttgcggtctggtctgcgaatgggctcagaaggttttgagtcgccag
tttgacagcgtggaggaactggcacgctttcttctcaacagtcattatattggcactaag
tctatggcagctctgactgttatgactggaaccccaacaggtatgaaaacccctacgcct
gcctctgcctttgtgccaactggtgaagccaactcattccagccccaagtgaagaccctc
ccttcgccttctgtagacgccaaacagcagctgcagcggaagatccagaagaaacagcag
gagcagaagctcacctctcctttgcccactgatgcccaggccagaagggcagaagcgggc
acaccaggacccggatccagcctgacctctggaagtcctgcactactgtcccctcaaccc
accataggcatcgtggtcactgctgttccaagtcctatcacagtccagagaagcaggcaa
ctaatgacctctccaagtcctgttggggcggcagagggaaaagttgtacctgttaacttc
caggttgtgacacaacctgttaagcagtctccaaaaacaccccaaaacatccctgccagc
ccagtcggtgacaggttggctagacaccgatatgctcagattttacctaaaccttctgcc
acaagcgccattgcccttcgctcgcccccaacgctcctcataaccaacagtcccatcaag
acggtgatgcccacaccccacgttagctctgtaaatgtggtcaagatgactgcaatttca
ttagcgcctaacagtagcagtagtagtattagtactcctaccccgttgcgacctgcttcg
gcgggtgtcagtagcacagcttctctggaagactctagccaaacccatcaagctcagaat
ggggcatctgtcatgtctcttcagtcatctgggaaagctggacgtacctccacaacccta
accccatcagtgtccactgttaccaatgaggtaaaagtgacttttgaagctgtgaatgac
agtaacttagccactgctgttgataaacaaagcactgcatcaggggcaagtacaggacta
aagaacgaaagagccactaaattcagggcttccagtgaaccctctttttttattaaggcg
tcccctgtgcctgagagagtggcaagggccaagagtgactctacaaccccttcaaataca
atcatgggggctcttgccccgagcagcaataacaacaacgatcaaccagaaagaactttg
tatttaactgttactagccagaatgtagacgccgaattgtcatccatttgtgctgtggca
acagcaagcacttcttctaaagatgctggcctcggtccaaaaagccctcgaaaacgctct
gcatctgttttggagacccatgcaattccagttaaaagagtattcatttcccagcaacct
ttggatgttagcagcaatgccaagcctggtattgtaatagcagctaagaagatacagaga
cctggcacctcagcaagaccagagagtgctccatgcaaagttacactaaaaccgagtagc
tcttttccgactcaaatcttggctctttctgacacccccattggagccctggacgcttct
cagactgttaatcctcagagctcttcacaaatcgagaatgaagttgccaatattagcccg
aatgaaacagcttctggtaatagcacaactttaatgccgcaaatcccaagtcaccaacaa
atcagcagtgatgtttctcaggaggtatctgctgtaagtgagctgaagagttccctgcaa
gactactcgcaacagatgcaagtagaacacaagcagattgcagctaatcccttaccgttg
atggcccaggcaactgagaccaacagtcagctcactcttcagcaggacattgttgatttt
gcaagagcccaagctagcatggactatttccccttcaatgatgatgatatgacccaggac
agtattgtagaagagcttgtacagatggaggaacagatgaagctgaatagcagcttgcaa
tcctacctgagttgtgttgatatatccctacaaggtcaatccacagttggccaagggaca
atcctgtcgccccatcaaacaagtacacagttctatcattcctcccatagtagcgcaact
ccaatccacacgccaactccgacacccacaccgacaccaacacctactccaactcctacc
tctgagatgctaccaggggggtcattgcttgaccagagaaagccttgttctcgaatggct
cctgttaccccagtggatagcatcttaggtgggcgccatacacccattagtactccactg
tcaaactgcagcagcagtgttcctccgagtcccatcgaatgccgcaatccctttgcgttc
acacctataaactctagtataactggatatcacgatggtagcgttgtgtccagcagtcca
gtgaaacccatgcaaaggccaatggccacccacccagataaagccaagctggagtggatc
aacaacaggtacaacagcaccgcagggtctcctgttatatccaccagctccaccattggc
atcctgcccagttaccaggatctggtcgaggaccatttccgtaaaccacacgcttttgcc
atcccaggtcaatctctccagtgtcagtcaaggcatcaggacggaaacttgggaaggttg
acaaccgtttccccagtgcaacaaggacagcaaactacccttagtagcaagcaagaaagt
tttgccgtcccagctccattggacagcaaggggacaggaagcacatctgcatctgcgggg
ggaaccttcagatgtcgcagcgttagcccggcagttcgccagcgtaaccttagtggcacc
actgctcaaacagttaccacgccaaggtctgttgtttctccctttaattgccccctgaca
tctgaggtcctgaacattttgtccaacaaccagtctgttgtcagtgccagcagcttagcc
cagaggagccaatcagttccactgaacatcatgatgcagtctgagctgctgcccgtcagt
caccaggcgcagcaaagcaatagtgccaagatcaccactgtgctccttagcaagatggac
acagatggagatgatacagtgcgagggctaggtgtaaataacctgcccgccaattacacc
gcacggatgaacttaacccaaatcctggagacaacacaaggcttctccggaggcgccaac
tctcagaaccagcagctgcctctggactcaagcccttcgccctttgacttccagaagacg
ggttacctcataagcacgggggaggagcaagtcaccttctccagtggtgacagtcaagca
caatcgggctctggacttcagcagccggaagagcagcttcagctccaagatccgcaattg
gagctgcaaaaccaacagctacaactccagaatcaacagctgcaacttccagctcagcag
ttacaactccaagaccaacagctgcaactgcaagaaccacagttgcaactccaggaccaa
caaatgcagttgcaggaccaacagccgttacgggatgacccagatcttagccagcagcac
ttgttgccccaaacttcgcagcaggttgtggatcaggagcagcaagagcagctagacttc
aacactaccgtcaaggatctcttgggggaggacagcctcaaccccagttcgcaacttgtt
ggacaagtagcatcagaactcagtgctgtcgcctctgagttttccagtgatatccggttg
acttctgacctttcaaatagcattaacgacctgaacactttggaccccaacttgctgttt
gaccccagtcagcagcaggaccaatatgaagacgccacactggaagaactaaagaacgat
cctctgtttcagcagatttgcagcgatactgtgaattctgctggtttcgattggctggag
aataaagaccagccaactgtggaaatgttgggataa
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