Carassius auratus (goldfish): 113042995 Help Entry 113042995         CDS       T07313                                  Symbol spg11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism caua  Carassius auratus (goldfish) Pathway caua04142   Lysosome Brite KEGG Orthology (KO) [BR:caua00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     113042995 (spg11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:caua03400]     113042995 (spg11) DNA repair and recombination proteins [BR:caua03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      113042995 (spg11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  113042995 NCBI-ProteinID:  XP_026057840 Ensembl:  ENSCARG00000015818 UniProt:  A0A6P6JBN3 LinkDB All DBs Position 25:complement(3436417..3474935) Genome browser AA seq 2360 aa AA seqDB search MLGTRSSECGALEVRLLAERVACGALEDAASLELSRGPSVLCCCVNTAGEVKLSSISESR AALHTLQHSCTDVVWERSGADVKLKLLLLDSGCALWLYELDAQGQPLLLCERSSDSLLQC VQHKHPDVLELLSLRPLWFADGCCVLLLNTCVLLQLRWTDETEQLETVSCVRLASPLQTE DVCADCRLCRGTLFMLLRTGLTYVFDSTDGKLLASLDFVSYCSVADVSFCLLQVSQDLST AVSVTRQNQALAVDLNHYFRKYPDHLHCRSAPNRPLLRPTESWDQDSLASSVHSLSVLDK PFQTDRSWEARLSSLYGRSKAPERRGHQGSPWYRDFPHVECRRAEATAKLSQPSVKPGGT VTCFDVPDGATAAGLNVSEYSALVTFVCPGNTNTVLAYWDLEGESVTYHRADAPAAPVQR SAEEHLCLLLKPSGLSVVLFCVTQDELLNRLMIFGTAGTVDSLCHLNAWGRCSIPIHALQ AGLKNHQLDTVDFFLKSKENIFSPASGFVLPDQTPAVSTQSHLRNVQALCPALDLLRSAI HDTHTEAQSQQFCDQLLSITLTFLNTQTKVLLTSSHELDVNLQECVQILDGYISDLRQYM KKFPWPDVCVSPDAPVSTADTDQEWQALSDEEVVQRAILSRRIPHAQAFLRRRGCVEYSL EDIRRTGLRRTFTCLTLRDLQQAKTLLTHMGFNVKEQLHSICVFTADRDLRAFMVEELQK QSFLSSEELQQVEFIHTINNLCSTPATRCSSRLDTSRVVQMSRSDPESRRLLQDITQEPD SSSCSSLLDPVRLDWVRYWDRDTQSSILLSRLQPSAQGSWDASVLWSYLTSLHDGVRASA WVHSSTAADAPCWPALTPHIINHHSRCGRYLRDQILDLLARQGLFVQSELEDFQQLLWRL GQAGGVMHHGKDPPVPQEQEFHQRFVLHCLENSLHYLLYCYLEHYRLTPGNCPLLTDRNL LESFPWFEMMLKLQKITRDLTEPERVFGASLTAAQVLLPGSQASISSMLLEGHSLLALST IMFRPGGIDQAVREGERGQDPLSRVDPQLLRMALGAYPKLRTALFPQSGPRCDVSLYHLL QALHPLDPSRLFGWQSANATGGSEASSELPHFSSSQLVSKFAVVENLDFLYYLSHGRPAF AFGVFLTQQLIDCSNVKLQVSLAADQAYSLALLNFSSACVSAACVCFCELLGVCSLKLRV DLCVLNLILRLWTQTCTEEEHRDVASLRQTLVEKAGKLVSGEKPSAQELLVHLETAVRDA LEKKGICRSSFEAAQEWALPVQFCHLHALPLSPAFPQDCARDGQWLNFLLFVQLHNYPLQ QVRSLAAGFSPALQSHISLAFQDLLPTGSHQALEDPGSVTHALPRDESPEPPRELFQVLL ESQEKPSPWRFLLSEAVRQRSPALSVLAACHQAAELLQCLCVWILASVGDDVTQEATAHI QESPAHHVWNLHDLSVLWKTLLCRSKIRPLIRGFQLFQRESPLISMLHMYEFCSDYKDYQ RAKDKLLDFQKCLLNLRSSSVVLSSDVLPVQWVESQASVLLLTLLKQSRTQYELRRLLQL LVDMERLLKSNGPDFRKLSQLSQVLSDTPVPLSACLLEQYSSAGLQDECRTIMQQLQDLG LFTQARSVAQLAELPLDCLIINELLRDLCAHQQKRQWERQETRLAFWRRCHEQLETDRVQ PEAASQFFLSQAEEPLESASELDHLQERCLLLGLAGHWLSLCDPPLPVSRLAALEKRQWQ SRIRWLLLHTALERQSLFAPSALSHDSFQSLLREFSFSRMAALDDPLHLSVSELPAAEDE CVLSGDERQALTALVAQLLDEGGVSEASRVCRYFGLFHRDVWLVLKCRGLASGELQPELH SPDGETRRSLPSSPSMSSLSSFVVVPSPDDQVLVQLKHLVDQCCSGKSYCKQVLSLYELS KELQCSFAEISSEEPEAVLRKVLLSQQVDRYKRAQAFISVQGLQPDTVARLVSTAVLEGL LASSQEGETGERLMYGPADGRETFLQLAKLCGDPNLVGTNLMDSIPTVPLSELSCTVEIL ILAHDCFSLTCNMEGIVRVLQASRHLSHSHLAHGDGYGLLVRLLTGIGRYNEMTYIFDLL HQNHRFEMLLRKKVESNVRLKTALLDYIKRCLPGDSEKHNMVALCFSMRREIGENHEAAA RTQLKIIESQPWAITADLKNALMKVLTLLKDAAESYSKDSCVRQAVKCVKLAKLVTLQLH FVSQGQEQRVINLRLPDLQSTIVSLPRCYQVFVLAEAYDYSPDWAELLYQKVILRGDFSY LEEFKRHRALSAGLFEDISKKMSHHKAPASSSQNLKKLLSHCEDVYTHYKLAYEHKFLDV ANMLLQDSKTNSFLKDRLGT NT seq 7083 nt NT seq  +upstreamnt  +downstreamnt atgctggggacgcggagcagcgagtgcggcgcgctggaggtgcgtctgctggcggagcgc gtcgcgtgcggggcgttggaggacgccgcgtcgctggagctcagcagaggcccgtcagtg ctgtgctgctgtgtgaatacagctggagaagtgaagctgagcagcatctctgagagtaga gcagctctccacactctccagcactcctgcactgatgttgtgtgggagcgcagcggtgct gatgtgaagctgaagctgctgctgctggactctggctgtgctctgtggctgtatgagctg gatgctcagggtcagccgctgcttctgtgtgagagatcgtctgattcactgctgcagtgt gttcagcacaaacaccccgacgtgctggagctgctgtctctgaggccgctgtggttcgct gacggctgctgtgtgctgctgctgaacacatgtgtgctgctgcagctccgctggacggac gagacggagcagctggagaccgtgtcctgcgttcggctcgcttcaccccttcagacggag gacgtctgcgccgactgccggctctgtcgggggacgctcttcatgctgctcaggactgga ctcacatatgtgtttgacagcactgatgggaagctcttggcgtcgctggacttcgtctcg tactgcagtgtagcagacgtctccttctgtctcctgcaggtctctcaggatctcagtaca gctgtgagtgtgacccggcagaaccaggccctcgccgtcgacctcaaccactacttcagg aagtatccagatcaccttcattgtcgctcagccccgaatcggcctcttctcagacccact gaatcatgggatcaggacagtctcgcgagctccgtccacagtctgtcggtcctcgataaa cctttccaaacagacaggtcgtgggaggcgcgtctgtcttctctgtatggtcgatctaaa gctccggagcgcaggggtcatcaggggtcaccctggtacagagatttccctcatgtggag tgccgtcgagcggaggccaccgccaaactctcgcagccctccgtgaagccagggggcact gtgacgtgtttcgacgtgccggacggagcgaccgcagcaggcctgaacgtctcggagtac tctgcgctcgtgacattcgtctgtcccggaaacacaaacacggttctggcgtactgggat ctggagggtgaaagcgtgacgtatcaccgcgcagacgccccagccgcccctgtccagaga tcagccgaggagcacctgtgtctgctactgaagccctcgggtctgtccgtggtgttgttc tgcgtgacgcaggatgagctgttgaaccggctgatgatttttggcacagctgggacggtg gactcgctctgccatctgaacgcctggggacgctgctcaatacccatacatgccctacag gccggcctgaagaaccaccagctggatacggttgatttctttctgaagagtaaggagaac atcttcagccccgcgtctgggtttgttctgcccgatcagacgccggccgtctcgacccag agccatctgaggaatgtgcaggctctgtgtccggctctggatctgctgcgatctgctata catgacacacacactgaagctcagagccagcagttctgtgatcagctgctgagcatcacg ctcaccttcctcaacacacaaaccaaagtgctcctcaccagctcacacgagctggacgtg aacctgcaggagtgtgtgcagattttagacggctacatctcagacctgcggcaatacatg aagaagttcccctggccggatgtgtgtgtgagtccggacgctccggtgtccaccgccgac acagaccaggagtggcaggcgctgtctgatgaggaagttgttcagcgggctatcttgagc agacgcatcccacacgcacaggctttcctgcgcagacgcggctgtgttgaatacagtctg gaggacatcaggaggacgggtctgagacgcaccttcacctgtctcactctcagagacctg cagcaggccaaaacactgctgactcacatgggcttcaatgtgaaggagcagctccacagc atctgcgttttcaccgccgatcgggatctaagggccttcatggtggaggagctgcagaag cagagtttcctctcgtctgaagagctgcagcaggtggagtttattcacaccattaataac ttgtgctccacacctgccacgagatgctccagccgtctggacaccagcagggttgttcag atgagccggtctgatcccgagagcaggcgtctgctgcaggatatcacgcaggagccggac tcgtcctcctgcagctctctactggatcctgtgcgtctggactgggtcagatactgggac agagacacgcagagctccatccttctgtcccgactgcagccgtccgctcagggttcgtgg gatgcctctgttctctggtcgtatctcacctctcttcacgatggtgtccgagcctcggcg tgggttcacagctcgaccgcggctgacgccccctgctggcctgcgctcacaccacacatc atcaaccaccacagccgctgcggacgctacctgcgggatcagatcctggacctgctcgcc cgtcagggcctgtttgtgcagtccgagttggaggacttccagcagttgctctggcgactg ggtcaagccggaggagtgatgcatcatgggaaggatcctcctgtgccacaggagcaggag tttcaccagcgcttcgtcctgcactgtctggagaacagcctgcattacctgctctactgt tacctggagcactacaggttaactcccgggaactgcccgctcctgaccgacaggaacctg ttggagagtttcccctggtttgagatgatgctgaaattacagaaaatcaccagagacctg acagagccggagcgggtgttcggggccagtctgacagcggcgcaggttctgctccccggg agtcaagccagcatcagcagcatgttactggagggtcacagtctgctcgccctctccacc atcatgttcagaccgggcggcatcgaccaggccgtgcgcgagggcgagcgcggtcaggat ccgctgagcagagtcgacccccagctgctgagaatggccctcggtgcgtatcccaaactc agaacggccctgttccctcagagcggcccgcgctgcgatgtgtccctctaccacctcctg caggctttgcatcctctggatccctccagactgttcggatggcagtcggccaacgccacg ggcggcagcgaagcgtccagcgagctgccgcacttctccagctctcagctcgtcagtaag ttcgccgtcgttgagaatctggacttcctgtattacctgagtcacggccggccggcgttc gctttcggggttttcctcacgcagcagctgatcgactgcagcaacgtgaagcttcaggtg tctctggctgcggatcaggcgtactcactggccctgttgaacttcagcagtgcgtgtgtg tcggcggcgtgtgtgtgtttctgcgagctgctgggtgtgtgtagcctgaagctgagggtg gatctctgtgtgctgaacctcatcctcagactctggactcagacgtgcacagaggaggag cacagagacgtcgcttcactgcggcagacgctcgtggaaaaggccgggaagctggtcagc ggtgagaagccaagcgctcaggagctgctggttcatctggagacggccgtcagagacgct ctggagaagaaaggcatctgtcgatcgtcgttcgaggccgcgcaggagtgggcacttcct gtccagttctgtcatctgcacgctcttcctctaagccccgccttcccacaggactgcgct cgtgacggacagtggctcaacttcctgttgtttgtacagctgcacaattatccgctacaa caggtcagatctctggcagctggtttcagtccggctctgcagtcgcacatctctctggct ttccaagatcttctcccgaccggctcccatcaggctctggaggatccagggagcgtcact catgctctcccccgagacgagagccccgaaccccccagagagctgttccaggtgctgctg gagagccaggagaagcccagtccctggaggttcctgctgtctgaagcggtccgtcagcgc agtcctgctctgtccgtgctggcggcctgccatcaggccgccgagctgctgcagtgtctc tgcgtgtggatcctggcgtctgtcggcgatgatgtcactcaggaagccaccgcccacatc caggagagccccgcccatcacgtgtggaacctccacgatctctccgtcctgtggaagacg ctgctgtgcaggagcaagatcaggcctctgattcgtggattccagctgttccagagggag tctccgctgatctccatgctgcacatgtacgagttctgctccgactacaaagactatcag cgagccaaagacaaactgctggacttccagaagtgtttgctcaatttgcgcagcagcagt gtggtgttgagctcagacgtgctgccggttcagtgggtggagtctcaggcttcggttctg ctgctgacgctcctgaagcagagcaggactcagtacgagctgcgccggctgcttcagctg ctcgtggacatggagcgcctgctcaaatccaacggtcctgacttcaggaagctcagtcag ctgagtcaggtgctgtcagacactcctgtgcctctgtctgcgtgtctgctggagcagtac tccagcgcaggtctgcaggacgagtgcaggaccatcatgcagcagctgcaggacctcggc ctcttcacacaggccaggagcgtcgcacagctggccgagctgcccctcgactgcctgatc attaatgagctgctgcgagatctgtgcgctcaccagcagaagagacagtgggagagacag gagacacggctggccttctggagaagatgtcacgagcagctggagacggaccgcgtccag cccgaagctgcctctcagttcttcctgtctcaggctgaggagccgctggagtccgcttcg gagctggatcatctgcaggagcgctgtctgctgctgggtctggcgggtcactggctgtct ctgtgtgatcctccgctccccgtctctcgtctggccgcgctggagaagcgtcagtggcag agtcgaatccgctggctgctgctgcacacggctctggagcgccagagtctgttcgctccc tcggctctgtcccacgactccttccagagcctcctcagggagttctccttctccaggatg gctgcgctggacgacccgcttcacctgagtgtgtccgagctcccggcggccgaggacgag tgtgtgctgtccggggacgagcgccaggctctgaccgctctggtggcgcagctgctggac gaggggggcgtgagcgaggccagccgcgtctgcaggtatttcgggttgtttcacagagac gtgtggctggtcctgaagtgtcgtggtctggcgagcggagagctgcagcctgagcttcac agccctgatggagaaaccagacgcagtctgccatcatcgcccagcatgagcagcttgtcg tcgttcgtggtggtgccatcgccggacgatcaggttctggttcagctcaaacatctggtg gatcagtgctgcagcggcaagagttactgcaaacaagtgctgagcctctacgagctctcc aaggagctgcagtgctcgttcgctgagatctcgtcggaggagcccgaggcggttctgagg aaggttcttctgtcgcagcaggtggaccgttataagcgtgctcaggccttcatcagtgtc cagggtctgcagccggacaccgtcgcccgtctcgtctccaccgctgtgctggagggtctg ctcgcctcgtctcaggagggagaaaccggagagcggctgatgtacggcccagccgacggg agagagacgttcctccagctggccaaactgtgtggagacccaaacctggtcggcaccaat ctgatggacagcatcccgaccgtcccgctgtcagagctcagctgcactgtggagatcttg atcctggctcacgactgcttcagtctcacctgtaacatggagggaatcgtgagggtcctg caggcgtccagacacctgagtcactcgcacctggctcacggagacggctacgggctcctg gtgcgtctcctcacaggtatcggcaggtacaatgagatgacgtacatctttgacctgctc catcagaaccatcgcttcgaaatgctgctgaggaagaaggtggagtcgaacgtcaggctg aagacggctctgttggactacatcaagcgttgtctgccgggtgacagcgagaagcacaac atggtggctctgtgtttcagcatgcgtcgagagatcggagaaaaccacgaggcagcggct cgaacgcagctcaagatcatcgaatcacagccctgggcgatcactgctgatctgaagaac gctcttatgaaggtcctgactttactgaaagacgcagctgagagctactcgaaggactcg tgtgtgcgtcaagctgtgaaatgtgtcaaactggccaaactggtgactctccagctgcac ttcgtgtctcagggacaggagcagcgcgtcatcaacctgcgtctgccagacctccagagc accattgtgtctttaccgcgctgttaccaggtgtttgtgttggccgaagcgtacgactac agtccggactgggccgagctgctctatcagaaggtcatcctcagaggagacttcagctat ctggaggagttcaagcggcaccgagcgctcagcgctggcctgttcgaagacatctccaag aaaatgtctcatcacaaggctccggcgagctccagtcagaatctgaagaagcttctgtct cactgcgaggacgtttacactcattataaactggcttacgagcacaagttcctggacgtg gccaacatgctgctgcaggactccaagaccaacagcttcctgaaggaccggctgggcacc tga

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