Carassius auratus (goldfish): 113043065
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Entry
113043065 CDS
T07313
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04150
mTOR signaling pathway
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113043065
04150 mTOR signaling pathway
113043065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113043065
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113043065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
EGF_LRP2
SGL
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
113043065
NCBI-ProteinID:
XP_026057976
Ensembl:
ENSCARG00000006697
UniProt:
A0A6P6JCX9
LinkDB
All DBs
Position
25:complement(4979890..5043993)
Genome browser
AA seq
1617 aa
AA seq
DB search
MELKQGALAMEILLLGLLLCCSLTVIRGSPLLLFANRRDVRLVDAEVGRTESTVVVGDLE
DAAAVDFLFSEGLIFWTDVSEEAIKQTYYNLSTNSMKEATLGKGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWQDLDQPRAIALNPAHRYMYWTDWGEEPR
IERAGMDGSSRQIIVQKQIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGTAREAIVEG
SLTHPFALTLYEKTLYWTDWQTRSIHACNKYTGEKRREILSGIYSPMDIQVLGQERQPNI
QTPCSERNGGCSHLCLLSPVPPFYSCACPTGVKLKEDGKTCRPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVSDIRHAIAIDYDPVEGYVYWTDDEVKAIRRARIDGSDAQTLVTNEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPINGYMYW
TDWGEMPKIERANLDGTDRVVLLNTSLGWPNGLAIDYVAGKLYWGDAKTDKIEVINVDGT
NRMTILEDKLPHIFGFTLLGEYIYWTDWQRRSIERVHITNTTREVIVEQLPDLMGLKATK
VSETFGTNGCAENNGGCSHLCFHRPQGLSCACPMGLELLSDLRTCVVPEAFLLFTNRADI
RSISLGTNSNDVPIPLTGVKEVTALDFDVLENRIYWTDVITKTISRAFMNGSLVEPVIEF
GLDYPEGMAVDWMGRNLYWADTGTNRIEVAHLDGQYRQVLVCKDLDNPRSLALDPASGYM
YWTEWGGRPRIARAHMDGSNIMTLVDKVGRANGLTIDFIDQRLYWTDLDTCMIESTNMQG
LQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLEYVMDILVF
HSSRQDGANECSQNNGNCAHLCLASPSGAQCRCASHYTLEANGRNCSSPSSFLLFSQKSS
ISRMVLGEQSPDMILPIHVMKNLRAISFDPLERLVYWVDGRQNIRSARDDGSQASTVMTP
TNLHPKQPHDLSLDPYSRTVYWTCETTNTINIHRMDGHVIGEVLKDDVDKPRAIVVNAEK
GYMYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIES
SDLSGANRIVLQDSNILQPVGLTVLGDHLYWIDKQQQMIECVDKLTGEKRTRIQGRLQYL
TGIHAVEYMEPEEFASHPCSRDNGGCSHICIAKGDGTPRCSCPTHLVLLQNLLSCGEPPT
CSSEQFTCSTGEIDCIPMAWRCDGIAECADHSDEMNCPICSELQFQCDKGQCVDSQLRCN
GEPDCADGSDEQDCATICMPNQFRCSNNQCILKKQQCDSFADCTDKSDELFCDLPLPPDN
IQRNTSTIGPVIGIILSVFVMGGMCFVCQRVVCRHYKGPNGGFPHEYISGTPHVPLNFIA
PTNSQHGTFTGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQML
NPPPSPATDRSLYNAEVFYSSNSPSTTRSYRPYVMRGVAPPTTPCSTDVCDSDYTTSRWK
SNKYYMDLNSDSDPYPPPPTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagcagggagcgcttgcgatggagattttattgctgggactgctgctttgt
tgtagtctgacggtgattcgtggttctcccttgctgctctttgccaaccggcgggacgtc
cggctggtggatgcagaggtggggcggacggagtccactgtagttgtcggcgatcttgag
gatgctgctgcagtagactttctcttctcagagggcctgatattctggacggacgtcagt
gaagaggccatcaaacagacttactacaacctctctactaactctatgaaggaggccaca
ctgggcaaagggcagacggtggtggtatcaggtctggattctcccgatggcttagcctgc
gactggctcggacgcaaactctactggaccgactctgagacgaaccgcatcgaagtggcc
aacttggacggcacctctcgtaaggtgctcttctggcaagatctcgaccagcccagggcg
atagcgctaaaccctgctcataggtacatgtattggactgactggggggaggagccaaga
atcgaaagggcgggaatggacggcagcagtcgacaaatcattgtccagaagcaaatctac
tggcccaatggactgaccattgacctcgaggagcagaagctctactgggcggatgccaag
ctcagcttcatccacagggccaacttggacggaacggctcgggaggctattgtggagggg
tccctcactcacccattcgccctcactctttatgaaaagacactctactggacagactgg
cagacccgatccatccatgcctgcaacaaatatactggagagaaacggagagaaattctc
agcggcatttactcgccgatggacatccaagtgctgggccaagagcgccagcccaacatt
caaactccatgcagtgaaagaaatggaggctgttcccacctgtgtctcctctctcccgtg
ccgcccttctatagctgtgcttgtccaactggggttaaactcaaagaagatggaaagact
tgtcgaccaggggcagaacaggtgcttctactggctcgccgcactgaccttcggcggata
tccctggatttacctgacttcacggacatcgtcttacaagtcagtgacatacggcacgca
attgccattgattatgacccagtggaaggatacgtctactggacggatgatgaggtgaag
gccatccgccgtgcccgaatagacggaagtgatgcccagactttggtcaccaatgaaatc
aaccatcctgatggaattgcggtggactgggtggcgcgcaacctctactggacggacact
ggcactgatcgcattgaggtgactagactcaacggcacttctcgacgcatcctcatatct
gagaatctggatgaaccacgagccatcgtgttagatcccataaacggatacatgtactgg
actgactggggagagatgcccaagatcgaacgagcaaacctggatggaacggacagggtt
gtgctgctcaacacctcccttggttggcccaatggtttggccattgactacgtcgcagga
aagctttactggggcgatgccaaaacggacaaaatcgaggtcattaatgtggatggcact
aataggatgaccattctagaggacaagctacctcatatctttggttttacgctgctggga
gagtatatctactggacggattggcagaggaggagcatcgaaagagttcacatcaccaat
accacacgtgaggtcatcgtcgagcagctccctgacctcatgggtctcaaagccacaaaa
gtctcagagacctttggcactaacggctgtgcggagaacaacggcggctgcagtcacctg
tgtttccatcggccccagggtctaagctgcgcctgccccatgggcttggagttgctgagt
gacctgcgcacttgtgtggttccagaagcgttcctgctcttcaccaaccgtgctgacata
cgcagcatctctctgggcaccaacagcaatgacgtgcccatcccgctcaccggggtaaag
gaggtcaccgcacttgactttgatgttttggaaaacaggatctattggactgatgtcatc
accaagactatcagcagagccttcatgaatggcagcttggtggaaccggtcattgagttt
ggcttggactatcctgagggtatggctgtggactggatgggtcgaaacctctactgggct
gatacgggcaccaaccgtattgaagtggcccatctggatggccagtaccgacaagtgctg
gtctgcaaagacctggataaccctcgctctctagctctggatcctgccagtgggtacatg
tactggacagaatggggaggtcgacccaggatagctcgagctcacatggatggcagtaac
atcatgactttggtggacaaagtgggccgagccaacggtctcacgattgacttcatcgac
cagcgactgtactggacagacctggacacctgcatgattgagtccacaaacatgcaaggt
ttgcagagagagatagtggctgacgatctccctcatccgtttggcttgactcagtatcgc
gattacatctactggaccgactggaacctgcgcagcatcgagcgggccgacaaacgcagt
ggcttgaaccgaacggtggtgcaggggcacctggagtatgtcatggacatcctggttttc
cactcctccagacaagacggtgccaacgagtgttcgcagaacaatggcaactgcgcccac
ctctgcctagcgtcaccctctggagcccagtgccgctgcgcttcccactacaccctggag
gcgaacggacgcaactgcagctcgccctctagcttcctgctcttcagccagaagagctcc
atcagtcgaatggtcctgggagaacagagtccagacatgattctaccgatccacgttatg
aagaacttgcgcgccatcagctttgaccctctggaacgcctggtctactgggtggatggc
cgacaaaacatccgcagcgcccgagacgacggcagtcaggcatccacagtgatgacccca
accaacctccacccaaagcagcctcatgacttgagtctggacccctacagtcgcaccgtc
tactggacctgcgagaccaccaacaccatcaacatccatcgcatggatggccatgtgatc
ggggaggtcctgaaggatgacgtggacaagccacgtgctatcgtggtgaacgctgagaaa
ggatacatgtatttcactactgtccaggatcgttcagctaaaatcgaaggtgcatctttg
gatgggacggagcgtgaatccctgttcacaaccggcttgatccgccccgttgcactggct
ttggacaacaagctgggcaaactgttctgggtggatgcagacctgaagcggattgagagc
agtgacctgtctggggccaatcgtatcgttctccaggactccaacatccttcagcctgtc
ggtctgactgtgttgggtgatcacctgtactggatcgacaaacagcagcagatgatcgaa
tgcgtggataagctgaccggagagaagaggacccgcattcaggggcgactccagtacctg
accggcatccatgcagtggagtacatggagccagaggagtttgcttcccacccttgttcc
cgtgacaacggaggttgctcccacatctgcattgctaagggtgatgggacgccacgctgc
tcgtgtcccacacacctggtgctgcttcaaaatctgctcagctgtggagagcctcccacc
tgctctagcgagcagttcacctgctctactggcgagatcgactgcatccccatggcttgg
cgctgtgacggcatcgcagagtgcgcagaccacagcgacgagatgaactgtcccatctgc
tccgagctccagtttcagtgcgacaaaggccaatgcgtggactctcagctgcgctgcaac
ggagaacccgactgtgcggacggctctgatgaacaggattgcgccaccatttgcatgcct
aatcagttccgatgtagcaacaaccagtgtattctgaagaaacagcagtgtgactccttc
gcagactgcacagacaaatctgacgagcttttctgcgatttacctttgccccccgacaac
attcagcgtaacaccagcaccatcggccccgtcatcggcatcatcctctctgtctttgtt
atgggaggcatgtgttttgtctgtcagagagttgtttgtcgccattacaagggccccaac
ggaggcttcccacatgagtacatcagcgggacccctcacgtgcccctcaacttcatcgca
cccacaaattcacagcacggtacttttacaggtatttcctgtgggaagtccatgatgagc
tcagtgagtctcatgggcagcagcagcagtggggcacctctctacgacaggaaccatgtg
acgggagcttcatccagtagctcttccagcaccaaaggagctttttaccctcagatgctc
aaccctcctccatcaccagcgacagatcgctcactctacaacgcagaagtcttttattca
tccaacagcccatctacaaccaggtcttacaggccgtatgtgatgcgaggggtcgcgccc
cccaccaccccctgcagcacagacgtgtgtgacagcgactacaccaccagccgctggaaa
agcaacaagtactacatggacctcaattcagactctgacccctaccctccgccccccacc
ccacgcagccagtacatgtcagcggaggagagctgccccccctcgccctccaccgaacgc
agctacttccacctgtgccccccgcccccctcgccctgcacggactcctcatga
DBGET
integrated database retrieval system
