Carassius auratus (goldfish): 113043285
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Entry
113043285 CDS
T07313
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
caua00535
]
113043285
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113043285
04091 Lectins [BR:
caua04091
]
113043285
Proteoglycans [BR:
caua00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
113043285
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113043285
Lectins [BR:
caua04091
]
C-Type lectins
Group 1: Proteoglycan core proteins
113043285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
Motif
Other DBs
NCBI-GeneID:
113043285
NCBI-ProteinID:
XP_026058323
Ensembl:
ENSCARG00000012547
UniProt:
A0A6P6JEP0
LinkDB
All DBs
Position
25:complement(11149780..11162425)
Genome browser
AA seq
1387 aa
AA seq
DB search
MMSLIWLLLYAYIHAISGMILFGDMADQDSPISVSIPVEPPLRPLLGGSMIIPCYFQDNT
VQDPGAPTTAPLPHRIKWSYIYKGRISLILVASGGVVQVETDYVDRVHLVNYPMVPTDAT
IEISELHSSDSGTYRCEVMQGIEDNYDSVEMQVQGIVFHYRAISTRYTLTFEMAKAACIQ
NSAVIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRD
INETYDVYCFAEKMSGSVFYSMSVEKFTFAEAEDQCANLGAQLATTGQLYLAWKAGMDVC
NAGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYAEKEDKVS
TKTSPFPKISTTTDSMISVATFTSSPSDYTEEVNTGEEVRGQLVTEEPLNTTSIESPLPL
LPNITEVEEDIINVATARPYLGYEIPMDNETAETKGVVFHYRADSGRYAYTFEEAQVACQ
KLGAIIATPELLQVAYEAGLHQCSAGWLKDQTVRYPTVNPQKKCSGDQKDLPGIHSYNVR
PAHERYDVYCYMEQIKGEIFHVSSLAGFTYYEAVAHCIKLGSTLASTGELFASWNEGFHK
CSPGWLSDRSVRYPVHNLGFGCGENKTGVHTIYTQPNQTGFPNPYSRYDAYCIRANLSML
LDEDMMNTTKMGMDLNMTDITELLRPVRPIVPPLLVELSGSGSGSGSSSGSTSASGDPDS
SSGYMSGSGIPSGSISGSGQSGDGSGHLVRYQEGADTLMWQTSASGSTMEAREGSGSGSG
VIITSVSSGDQESGEESGLFYEQSGRGPGSGSSGSGTSGFFSGEESSLPSGFGSGSSGSG
TSGFFSGEESSLPSGFGSGSSGSGTSGFFSGEESSLPSGHGSGSSGSGTSGFFSGEESSL
PSGHGSGSSGSGTSGFFSGEESSLPSGHGSGSSGSGTSGSFSGEESSGSGFSGVSFINTE
MIDMTASTSGKQELSGVSPFDLTDVSGLSSAFGSGSASGSGSAIGFGSGTIIDFASGSAI
GFRSGSASGASGYPSDPSGEVSGHIQSQDGKIVILTDDEVELMFRPTIGTEQGRGSVEIS
GEGSSQEHYAEDVSISLSNSTSYEDYWSVNETVDLLPEGQNQLKVITEAFDVTDQSPLNT
TPSTTSILITPPSAVLQTPKAMEEPFLTDAVQGCAEGWMEFMGSCYIHFDVRETWTTAEQ
HCQELNSHLVSISSQQEQVFVKNQARDYQWIGLNDKDEQNQFRWTDGSPLKYENWRPNQP
DNYFSTGEDCVVMILHEDGQWNDVPCNYHLPFTCKSGPVTCSSPPEVKNARMLGNSKDRY
PVNSSIRYQCDSGFTQRHLSVVRCLPDGQWEEPKVECIGGETNNRLRKRSLKTHPKAVNS
RTWRKVL
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctttgatttggctcctgttatatgcatacatccatgccatttctggcatgatc
ttatttggggacatggctgatcaggacagccccattagtgtgagtatccctgttgaacca
ccactgcgtcccctattggggggaagcatgattataccttgctacttccaggacaacact
gtccaggaccctggcgccccaaccactgccccacttccccaccgtattaagtggagctac
atctacaagggcagaatatctcttattcttgttgccagtgggggtgtggtgcaggttgag
acagactacgtggaccgggttcatttggtaaactaccccatggtgccaactgacgccacc
attgagatctcagaactccactccagtgactccggcacctaccgctgtgaggttatgcag
gggattgaagacaactacgattctgtagaaatgcaagtccaaggcattgtgtttcactac
cgagcaatatctacccgatataccttgacatttgagatggcaaaggcagcctgcatccag
aacagtgctgttattgcaactcccgcacagttgcaagctgcctatgatgatggataccat
caatgtgatgctggttggctttcagaccaaactgtgaggtatccaattcatgagccaagg
gagccttgctatggagacaaagaaaatttcccaggagtacgaacatatggagtcagagac
atcaatgagacctatgacgtgtactgttttgcagagaaaatgtcaggtagtgtgttctac
tctatgtctgtggagaagttcacctttgcagaggctgaagaccagtgtgcaaatttggga
gcccaactggccaccacagggcaactctaccttgcatggaaggctggtatggatgtgtgc
aatgctggctggctggcagacaggagtgtgaggtaccccattaacatagctcgaccccag
tgtggtggggggcttttgggagtgcgaacagtgtacctgtttccaaatcagactggttat
ccatacccagactcccgctatgatgcaatatgttatgcagaaaaagaagataaggtttca
acaaagacctcaccatttcctaaaatatccactaccacggattccatgatcagtgtggct
acattcacctcgagcccttcagactatactgaagaggtgaacacaggagaagaggtccgt
ggtcagctagtgacagaagagcctcttaacaccacaagcatagaaagtcctctaccttta
cttcccaacataactgaggttgaggaggacattattaatgtggccacggctcggccttac
ttgggatatgagattcccatggacaatgaaactgctgaaactaagggagtggtattccac
tatcgtgctgactccggacgctatgcttacacctttgaagaagcacaagtggcatgtcag
aagctgggagcaatcatagccacccctgagcttcttcaggtggcttatgaagctggcctt
catcaatgcagtgcaggttggctaaaggaccagactgtcagatatccaactgtgaatcct
caaaagaagtgctccggagatcagaaggacctccctggcatacactcttacaatgtcagg
cctgcacatgagcggtatgatgtgtactgttatatggaacagataaagggagagatcttc
catgtgagctcattagcaggcttcacctactatgaagctgttgcccattgcataaaactg
ggatctactcttgcttcaactggagaactgttcgcctcatggaatgaaggtttccacaag
tgcagtccaggctggctgtctgatcgcagtgtgcgctatcctgtccacaacctaggcttt
ggttgtggtgaaaacaagacaggagtgcatactatttatactcaaccaaaccaaacaggc
ttcccaaacccatactccagatatgatgcatattgcatcagagcaaatctgtctatgctg
cttgatgaagatatgatgaacactacaaagatggggatggatcttaacatgacagatata
acagagctactgagacctgttcgcccaattgtccctcccttgcttgtggaactgtctgga
tctggatctggatctggatcgagctcgggctcaacatcagcatcaggtgatcctgattcc
agttctgggtacatgtcagggagtggcatacccagtgggagcatatccggttctggccaa
agtggtgatggatcaggtcaccttgtgaggtaccaagaaggtgcagatacactcatgtgg
caaacttctgcctccggcagcactatggaggcaagagaaggtagtggcagtggcagtggt
gttatcattacttcagtatcatcaggggatcaagaatctggagaggaatctggactcttt
tatgaacaaagtggcagaggacctggcagtggatctagtggttcaggaacaagtggattc
ttcagtggtgaggaatcaagccttccatcaggatttggcagtggatctagtggttcagga
acaagtggattcttcagtggtgaggaatcaagccttccatcaggatttggcagtggatct
agtggttcaggaacaagtggattcttcagtggtgaggaatcaagccttccatcaggacat
ggtagtggatctagtggttcaggaacaagtggattcttcagtggtgaggaatcaagcctt
ccatcaggacatggtagtggatctagtggttcaggaacaagtggattcttcagtggtgag
gaatcaagccttccatcaggacatggtagtggatctagtggttcaggaacaagtgggtcc
ttcagtggtgaggaatcgagtgggtcgggcttctctggtgtatcatttataaacacagaa
atgatagatatgactgcaagtacttctggaaaacaggaattgtctggtgtttctccattc
gacttgactgatgttagtggtctcagctctgcttttggatctggttctgcctctggatct
ggctctgccattggctttggatctggcaccatcattgactttgcatctggttctgccatt
ggctttcgatctggctctgcttctggagcttcaggttatcccagcgatccctctggtgag
gtatctggccacattcagagtcaggatggaaagattgtcattctaacggatgatgaggtt
gagttgatgtttaggcctacaattggaacagaacagggtcgtggatcagtggagatcagt
ggagagggcagtagtcaagaacattatgctgaggacgtctccatatctctttctaatagt
acttcatatgaagattattggagtgtcaatgaaactgttgatctcctaccagaaggacaa
aatcaacttaaagtcatcactgaggcatttgatgtgactgatcagtcaccactgaacaca
acaccatccacgacttctatactcattactccaccttcagctgtactacaaacaccaaaa
gctatggaggagccatttttaactgatgcggtacagggatgtgctgaggggtggatggag
ttcatgggcagctgttatattcattttgatgtgcgtgagacctggaccactgctgagcag
cactgtcaagagctaaactctcacctggttagcatatcctcccaacaagaacaagtgttt
gtaaaaaatcaagctcgtgactatcaatggattggacttaatgacaaggatgagcaaaat
cagtttcgctggacagacggaagccctttgaaatatgaaaactggagacccaatcagcca
gataattacttcagcaccggagaagactgtgttgtaatgatattgcatgaggatggccag
tggaacgatgtaccctgcaactatcatcttccttttacttgcaagagtggacctgtcacg
tgttcatcacctcctgaagtgaagaatgccaggatgttaggcaacagcaaagatcgctac
cctgttaattcttcaattcgataccagtgtgacagtggattcacacagcgccacctttca
gtggtacgttgcttacctgacgggcagtgggaggagccaaaagtggaatgcataggaggt
gaaacaaacaacaggctacggaaaagatccctcaagacacatcccaaagcagtcaatagt
cgaacgtggaggaaagtcctctaa
DBGET
integrated database retrieval system
