Carassius auratus (goldfish): 113043383
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Entry
113043383 CDS
T07313
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113043383
Membrane trafficking [BR:
caua04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113043383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
113043383
NCBI-ProteinID:
XP_026058510
Ensembl:
ENSCARG00000059454
UniProt:
A0A6P6JDI3
LinkDB
All DBs
Position
25:complement(12813202..12863071)
Genome browser
AA seq
3231 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDSSQLSLGIWGGDAILRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDEVFLLIVPTASIKYDAEKEERQLQEAQQKELQRIEE
TKQKAAEKENPKAEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPDAPLSFGVSLQ
NLSLQTADENWKPCLLDETAKLFFKLVRLDNLFAYWNVNSELYSNHNPEEALRYLKHSVA
IQSAIPQDYHFIFRPISANAKLRMNPRSDVDFSSPKVDLVVNLPEVAVELSHPQYISILE
LLGSVDMMTRNLPYRKYRPDVAVHTNARQWWRYVITGVLEVSVKPRLHMWSWQRIRHHRQ
HVKKYRELYKNKITSKKPAESLLKELEETERTLDIFNITMARQQAEMEASKAGFRIYRPG
VKVEEEQSQGWFGWMWGWSGESDTPTKDVKTGGFDELMTPAEKAKLYAAIGYSETGVNPN
LPKNFENMKIHFQLNRLCLSIKESREKPEIIKLSVIDLKAMLTQRPAAQAIKISAQLSSF
EVSGLPRGKSAPILLSPRHVVGMKDLALLDLMFETNPLDAKADQRLRIESQALEIIYDAM
TVNSMSAFFMPPKDLQLDELTNATLMKLEQFRDKTSTGLMYVIETQKVLDLKINLMASYV
IVPENGFYDPKHNLAILDLGHFQMSSQSRADLPQLSAGSSTIEDIMSRAYDSFDVQLSSL
QFLYTKAGGDWKQARLLRQSTFHILEPVDLKVVFSRAMVVTDSRMPKFKIYGELPLLSLR
ISDDKVRGVLALLSSIPLPESRPVPQTRAPQVTPKTSKRGNTPQLIPRRPAVDDLRASII
YGPDEELFFDAPSSPIEDLPFFEASTDSLQGSASDKRLSMVLRDPKKNMTELLLRFEINK
LSIQLCRLSDSEEVSVLHLFIDGLGTELKLRTFDMSSYTFLREICLECSEYLDSEDKKVH
LITTLDNSEEDLLTLEYVKADKNAPDFKTMHKNTEQLIKVNFSSLDVHLHTEALLNSINF
LNNLLPPLKKEAQEEQPVLPKEEEEEEEEAKIEDSSVTKKSSCKKSKFEDVVNLHIRADL
SCLKVFIRGEKARISEISIEGLVSEVQMKKKCVEILANLKNIVILDCDKEALYKKAVSIA
GKEVFDFRMVNHVDATEGDAYTDMHIVDTSVTLTVGCIQVVFLNKFMSSILAFINNFQEA
KNALAEVTAQAAEKAATGVLELAERSTRISLDVDIKAPVVFLPQSSVSHNVIVADLGLVT
IKNHFEIVSSPPHTKIPPVVDIMAVGLRDLKMYRTTFTDGQFKSELQLLKPVNMDLSIKR
NLSASWYRSIPDIQINAHLKPMSLILSQEDLTIVLKTLSENLSENSDAPPAPSSSDKGDT
VSTKDSQSSGGNTVVTAAVVEGQKTGKLKNTLKLDFKFDSMTIVLYSHNNEVTKYTQFTL
DKSVMIACEARFKFCVYVQIQLSDSRDESLKLAEFMLGTISTAVHMFSDSSMKASLKLTN
CLLDDKRQRVKMITSRMMAMRQGRESDVMVDVSYRQGRDGTVLDTLVQDLYLCASMEFLL
TVADVFLKALADGFSGPPKNKQLASSSKDTAVPAAPVVAKTEMNIVVKNPEIVFVADLTR
AEAPALVMTTQCELVMKNEPSGQSMTAAISDLKVVSCPLLREKREHNVTTVLQPCQVFFQ
SSQSPSQPQSIELSISSLTLKVSPIIINTVITIQSALSPAAETPEELESPVPQDLWERRN
LRDLKLWFLEEEEENVTRSVIRLVPHGESLKMNIHSICLTLEAGVGHRTVPMLLAKASFQ
GDVKNWSTLINLHCHLDLEVNYYNEMMGVWEPLLEPLDDEEKDGFRPWTLAMKMKKKPVS
YSEVSDEVDGSVPDYKTVISFTSKDQLNITLSKCGLHMLSNLGTAFAEATKQTAECFQKD
QAPFVVKNRLGLPLAVMHSEVFRPIGKESKNRVVELQDGENLNLDYTHTSESSDQFSAMT
SLSAKNYIQPTPVGHTSASVIPLIKTGRDMHSVMHRDSGVTRFFVCQIYTVEGGKYVKIR
SPFQIINHFSVAFRVYEGSECLGVSLPSEEFCVPLGSYRAELSLQPVTEDEEQYDRSECF
TYTEVNQKPGECLEKTCHHQGDSTQMLKVNMVPVPDALMTHSPEEEYDKPIILHLWPTVL
LRNLLPYPITFKIKGNGDFPSSLLKAGHSTQIHTAIMDFSTLELKLLGYLQQDWESKYSL
CSDGDELSFITFHSLAVDEETEMETETELHIAVHVKKEEGQLVVAIHSPYWMVNKTGRLL
QYKADDIHRKHLKDYDMPLLFSFKPRNFLQNNKIRLMISESELSEDFSIDTVGSYGDVKC
KGEQKDYMVGVKIDTTSFSLTRLVTFLPFYTLLNRTKHVIRVCEEGLDQWTEARPGQVAV
PFWPERDSRKLRVIVEGCQSSPQPFDFHQTENCLLLHLDRTLGGIIVDVNLTEHSSVIRF
SDYHDGAAPFLLINHTKDETLQFHQSSQEEMDELAPGQAVYYTWAEPTGSRILSWKWGKY
KGELKSEKDQLLDVNKEGKFFVISFYEGLQRVALFTTEHGVFKKICDNEKIELAEQETCI
LLQNMGVSLVNNTSSQEVAFIGITSSDVVWETKPKKRSRWKVLRVKEAAMLEQCYREYME
SGPVDSIIIDLENEYQVLFAANGVDMRILQPFDAPLRRNFLPALKVEYSVSTRQKTYRVQ
INRIQIQNQLPGAIFPFVFYPVKPPRSVSMDSEPKPLADVSIITRAAGHSDILRIKYFKV
LIQEMDLRIDLGFLYAILELLTAEHVSVVTSEQQVVLFEKDIEYLKTELYHSSATDTSPI
SLYEYFHISPIKLHLSFSLSTGGEDGNKKERGSEVIPVHLLSVLLKSIGATLTDAQDVLF
KLGFCELKYQFRTTQQLQSEVIGHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAF
FYEPYQGAIQGPEEFMEGMTLGVKALVGGAVGGLAGAASRITGAMAKGVAVMTMDEEYQQ
KRREAMNKQPSGVREGLTRGGKGLISGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GALTRPTGGIIDMASSTFQGIKRAAGTSQDVESLRPPRFIHEDGVIRPYKEREGIGSQML
QSIENGRFAKYRYFAHAKVNESDFLMITKKGIFFVTKGTFGQLTCEWQYLFDEFTKAPIV
MEGRRLRIEAKERVKSVFHAKEFGKIINFKTPELAKWVLAKLEDARETLPK
NT seq
9696 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgagtcggtggtggtcgatgtcttgaaccggtttctgggggactatgtggtg
aacctcgacagctcgcagctcagcctcggcatttggggaggtgatgccatattaagaaac
cttgagataaaagaaaatgccttgagtcaactggacatccctttcaaagtccgagcggga
cacataggacgtttggagttgaagatcccttggaagaacctgtatactcagtctgtggag
gccacgctggatgaagttttcctgctcatcgtgcccactgctagtataaagtatgacgca
gagaaggaggagagacagctgcaggaagctcagcagaaggagctgcagcggatcgaggag
accaagcagaaagcagcagaaaaagagaatccaaaggcagagaagcaggacacatttgtg
gagaaactggttacacaggtgatcaaaaacctgcaggtgaagatctccaacatacacgtc
cgctatgaggatgatgtcaccaatcccgatgctccgctctccttcggagtgtccctgcag
aacctcagcctccagacagctgatgagaattggaagccatgtcttctggatgagacagcc
aagctgtttttcaagcttgtacgtctggacaatctgtttgcgtactggaatgtgaattca
gagctctactccaaccacaaccccgaggaggctctgcgatacttgaagcacagtgtagcc
atccagagcgctatccctcaagattatcatttcatctttcgtccaatatctgcaaacgcc
aagctgcgcatgaatcctcgctccgatgtggacttctcctcaccaaaagtggatctagtg
gtcaacctcccggaggtggcggttgaactcagccatccacagtacatcagcatcctggag
ctgttggggtcggtggatatgatgacccgtaacctcccatacaggaaatatcgtccagat
gtggcagttcacactaatgcgcgtcagtggtggcgatatgtgatcacgggcgttttggag
gtcagtgtaaagccccgccttcacatgtggtcatggcaacgcatccgtcaccatcggcaa
catgtgaaaaagtacagagagctctataagaacaaaatcaccagtaagaagcctgcagag
agtctgctgaaggagcttgaggagactgaaagaaccctggatatattcaacatcacaatg
gcgagacagcaggctgagatggaggcttcaaaggcggggttcaggatataccgtcctggg
gtgaaggtggaggaggaacagtcacagggctggttcggctggatgtggggctggtctgga
gaaagtgacacaccaaccaaagatgtaaaaacgggaggttttgatgagctaatgactcca
gcggagaaagccaaactatacgctgccattggatacagcgagacaggcgtcaatcctaac
ctgccaaaaaattttgaaaatatgaagatacacttccagcttaatcgcctttgtctgtca
atcaaagagagccgagagaagccggagattatcaaactgtccgtcattgatctgaaagcc
atgctgactcagagacctgcggcccaagctataaagatctctgctcagctgtcatcgttt
gaagtgtcgggtctcccacgaggcaagtcggcccccatcctgctgtctccacgtcacgtg
gtcgggatgaaagatttggctttactggacctcatgtttgagacgaacccactggatgcg
aaagcagaccagagactccgcatcgagtcccaggcgctggagatcatctatgacgctatg
accgtgaacagtatgtcagctttcttcatgcctccaaaggacctgcagctggatgaactg
accaacgccaccctcatgaagctggagcagttcagagacaagacctccacaggacttatg
tatgtcattgagactcagaaggttctggatctgaagataaacctcatggcttcatatgtc
attgtaccagaaaacggcttttatgaccccaaacacaaccttgccattctggatttgggt
catttccagatgtccagtcagagcagagctgacctgcctcagctgtccgcgggcagcagc
actatagaggacatcatgtctcgagcttacgacagcttcgatgtccagctcagcagttta
cagttcctctacaccaaagcaggtggtgactggaagcaggctcgtctgctcagacagtct
acgtttcacatcctggagcctgtggacctgaaggtggtcttcagcagagccatggtggtg
acagactcacggatgcccaagtttaagatttacggtgagctccctcttctgtctctgcgt
atctctgatgataaagtgcgtggcgtcctggcgttgctcagcagcattccccttcctgag
agtcgcccggtgccccagactagagcgccacaagtcacacccaagacctccaaacgtggg
aacacacctcagctcatccctcgaagaccagccgtagacgacctgcgtgcatccatcata
tacggcccagacgaggagctgttctttgatgcccctagttcaccgatcgaggatctgccg
ttctttgaggcttccactgactctctgcagggttcagcctctgataaacgtctgtccatg
gtgctcagagaccccaagaagaacatgaccgagctcctcttgagatttgagatcaacaag
ctttctattcagctgtgccgcttgtcagacagcgaggaggtgagcgttctgcatctgttc
attgatggattagggacagaactcaaacttcgcacctttgacatgtcttcgtacaccttc
ctgcgtgagatctgcctcgagtgttcagagtacttggattctgaggacaagaaagttcac
cttatcaccactctggacaattctgaggaagatctgctcactttggaatatgtcaaggca
gacaaaaatgcaccggatttcaaaacgatgcataaaaatacagagcaactaatcaaggtg
aatttctcctcactagacgttcatctgcacactgaggcgctcctcaactccataaatttc
ctcaataacctcctcccaccactaaagaaagaggcacaagaggagcagcccgtcctaccc
aaggaggaagaagaggaggaagaggaggcaaaaatagaggattcttctgtaaccaagaaa
tcttcctgtaagaagtcaaagtttgaggatgtggtgaatttgcatatccgagcagacctc
agctgtctgaaggtcttcataagaggagagaaagccaggatctctgagatcagcatcgag
gggctggtttctgaagtacagatgaagaagaagtgcgtagagattctcgctaacctgaag
aacattgtaattctggattgtgacaaagaggcactatataaaaaggcagtgtccatcgcg
ggtaaggaggtgtttgatttccgcatggtgaaccatgtggatgcaacggagggtgatgcc
tacacagacatgcatattgtggacaccagtgtaactttgactgtgggctgcattcaggtt
gttttcctcaacaagtttatgtcctcaatactggcatttataaataatttccaggaggct
aaaaatgcattggcagaggttacggcccaggcagcagagaaagcagccactggggttttg
gagctggcagagagaagcacacgtatctccctggacgtagacattaaagctcctgttgtc
ttcctcccacaatcctctgtttcccacaatgtcattgtggcagatttgggtttagtgacc
ataaagaaccactttgaaattgtctcctctccaccacacaccaagatccccccggtcgtg
gacatcatggccgtgggactgagggaccttaaaatgtacaggaccacattcactgatgga
cagtttaagagtgaacttcagttactcaaaccagtcaacatggacctgtcaatcaaacgc
aatctctctgcctcctggtatcgcagcatacctgacatccagatcaatgcacacctcaaa
cccatgagcctaatcctgagtcaggaggaccttacaatagtgctgaagactctgagtgag
aatctgtctgagaattctgatgctcctccagctccatccagctctgataaaggagacaca
gtttctaccaaggattctcagagttctggaggaaacacagttgtgaccgcagcagtggtg
gaaggccagaaaacaggcaaactaaagaacactctgaaactggactttaagtttgactcc
atgacaatagtcctgtacagccataacaatgaggtgacaaaatacactcaattcacctta
gacaagagtgtaatgattgcatgtgaagccaggtttaaattttgtgtttacgtacagatc
cagttatcagactcccgtgatgagagtttgaagttggcagagttcatgttgggcaccatc
tccaccgctgtgcacatgttctctgacagctcaatgaaagcctcgctcaaactcacaaac
tgtctgctggatgacaagagacagagggtgaaaatgatcacatccaggatgatggcgatg
cgtcagggcagggaaagtgatgtgatggtggacgtgagttatagacaaggccgggacggc
accgtgctggacaccctggttcaggacctctatctgtgtgccagtatggagttcctgctc
acagtagctgatgtctttcttaaagctttggcagatggcttctctggtccccctaaaaac
aaacaactcgccagttcctctaaagacactgcagttcctgctgcaccagtggttgccaaa
actgagatgaacattgtggtaaagaatcctgagatcgtttttgttgctgacctcacacgc
gctgaagctccggctcttgttatgacgacgcagtgtgagctggtgatgaagaacgagccc
agtggtcagtcgatgactgcagccatttcagacctgaaggtggtgtcatgtccgctcctg
cgagagaagcgggagcacaatgtgacgactgtgcttcaaccctgtcaggtgttcttccag
agcagccagtctccttcccagccacagtccatcgagctgtccatcagctccctcacgctc
aaggtgtctcccatcatcataaacacagttatcaccattcagtcagcgctgagccctgca
gctgagacccctgaggaactggagagtcctgtgccacaggatctgtgggaacgtcgcaac
ctgcgagacctaaagctctggttcctggaggaggaagaagagaatgtcacccggtctgtc
attcgactcgttcctcatggagagtctctcaaaatgaacatccactccatctgtctgacg
ctggaggccggcgtgggccatcgcactgtgcccatgctgctggccaaagcctcgttccag
ggagacgtgaaaaactggagtactctcattaacctgcactgtcacctggacctcgaggta
aattattataatgagatgatgggcgtatgggaaccactgctggagccgcttgatgatgag
gagaaagatggcttcagaccatggactctagcgatgaagatgaagaagaagccagtatca
tattctgaagtatctgacgaggtggacggcagtgtgcctgattataaaacagtcatcagc
ttcacgagtaaagaccagcttaacatcaccctctccaagtgtggcctccacatgctgagc
aatctaggaacggcatttgcagaggccactaagcagaccgctgaatgctttcagaaggac
caggcaccgtttgtggtgaagaatcgtttgggtttgccattggcagtaatgcacagcgaa
gtgtttagacccatcggtaaagagtctaaaaatcgtgtggtggagctccaggatggagag
aatctgaatttggactacacccacacttcggaatccagtgaccaattctcagccatgacc
agcctcagtgccaaaaactacatacagcccactccagttggccacactagcgcaagtgta
atcccactaatcaaaacaggacgggacatgcacagcgtcatgcaccgtgactctggtgtc
acccgcttctttgtctgtcagatttacactgtcgagggaggcaaatatgtcaagatccgc
tctcctttccagatcatcaatcacttttcggtggcgttccgtgtttatgagggatctgag
tgtctgggcgtctctctgccttcagaggagttctgtgtgcctctgggctcctacagagct
gaactgagcctgcagcctgtaaccgaagacgaggagcagtacgaccgctccgagtgtttc
acttacactgaggtgaatcagaagcccggagagtgtctggagaaaacctgccatcatcag
ggagacagcacccagatgctgaaggtcaacatggttcctgtcccagacgctctgatgaca
cacagccctgaggaggagtatgacaagcccatcattctgcacctgtggcccaccgttctc
ctccgcaacctcctgccgtaccccatcaccttcaagataaagggcaatggagatttcccc
tcttccttactgaaagcgggccactccacccagatccacaccgctatcatggatttctcc
actctggagctgaagctgctgggatacctgcagcaggactgggagtccaagtacagtctg
tgcagcgatggtgacgagctcagcttcatcaccttccactcgctggcagtggacgaggag
acggagatggagaccgagacggagctccacatcgcggtgcatgttaagaaggaggagggt
cagctggtggtggccatccactccccgtactggatggtgaataagacgggcagactgctg
cagtacaaggcagacgatattcatcgcaaacacctgaaggattacgacatgcccctcctc
ttctctttcaagccacgcaactttctgcagaacaacaagattcgcctgatgatctcagaa
agtgaattatcagaagatttctccatcgacactgttgggagttacggtgacgtcaaatgc
aaaggggaacagaaggattacatggtgggagtgaagatcgacaccaccagcttcagtttg
actcggttggtgacgttcctgcccttctacacgctgttgaacagaaccaagcacgtaatc
cgagtctgtgaggaaggtctggatcagtggaccgaggcccgacccggacaggttgcggtt
ccattctggccagaaagagactcaaggaaactccgagtcatagtggagggctgccaatcg
tcgccacagccgtttgatttccaccagacggagaactgcctcctgctgcacctggacaga
accctgggtggtattattgtggatgtgaatctgacggaacattcttccgtcatccggttc
tctgattaccacgacggcgccgctccattcctcctcatcaaccacactaaagacgagacg
ctccagttccaccagagctctcaggaagaaatggatgagctggctccaggtcaggcggtg
tactacacctgggccgaaccgaccggctcaagaatactgagctggaagtggggcaagtac
aaaggagagctcaagagcgagaaggaccagttgttggatgtgaacaaggagggaaaattc
tttgtcatctctttttatgaaggcctccaacgtgtggcgcttttcaccaccgagcacggt
gtcttcaagaagatttgcgataatgagaaaatagagctggctgaacaggaaacctgcatt
ttgttacagaacatgggcgtctcactggtcaacaacaccagcagccaggaagtggccttc
attggcatcaccagttctgatgtggtgtgggaaaccaagccgaagaagcgcagccgatgg
aaggttttaagggttaaagaggctgcgatgttggagcagtgctacagagaatatatggag
agcgggccagtggacagcatcatcattgaccttgagaacgaataccaggtgttgtttgct
gctaacggggtggacatgaggatactgcagccctttgacgctccgctcaggaggaacttc
ctgccagcattaaaggtggagtacagtgtctccacccgccagaaaacctacagagtccag
atcaacaggattcagatccaaaatcagttgcctggagccatcttcccattcgtcttctac
cccgtcaaaccgcccagatcagtcagcatggactcagagccgaaaccgctcgctgacgtc
agcatcattaccagagcagccggacactctgacattctgcgcatcaagtattttaaagtg
ttgattcaggagatggacctgcggatagatcttgggttcctgtatgccatacttgagctc
ctcactgctgagcacgtcagtgtggtcacgtctgaacagcaggtggtgttgtttgagaag
gacattgagtatctgaagaccgagctctatcatagttcagctacagacacgtcccccatc
agcctttacgaatacttccacatctctcccataaagcttcacttgagtttctctctgagc
accggtggtgaagacgggaataagaaagagcgcgggtcagaggtcattccggttcatttg
ctcagcgtcctgctgaagagtattggagctacactcactgacgctcaggacgtcctcttc
aaacttgggttttgtgagctgaagtaccagttccgcaccactcagcagctgcagtcggag
gtcatcggacattattccaaacaggctatcaagcagatgtatgttctggttttgggtttg
gatgtcctcgggaatcctttcggactgatccgtggtctgtctgaaggcgtcgaggccttc
ttttatgagccttatcagggtgccatacagggaccagaggagtttatggagggcatgacg
ctcggtgtgaaggctctggttggaggtgctgtgggcggtctggccggagcggcgtctcgg
atcacgggagccatggctaaaggtgtagcggtcatgaccatggatgaggagtatcagcag
aagaggcgcgaggccatgaacaagcagcccagcggagtgagagaaggcctgacacgagga
gggaagggactcatctctgggtttgtgagcggcatcacaggcattgtgactaaacccatt
aaaggagctcagaaggaaggagcggcgggtttctttaagggtgtgggcaaaggtttggtg
ggagctctgaccagaccaacagggggcatcatagacatggccagcagcaccttccaaggc
atcaaaagagctgcagggacgtctcaggatgtggagagtttacgtcctcctcgtttcatc
catgaggatggagtcatccggccgtacaaagagagggagggcattggcagccagatgctg
cagagtattgaaaacggacggtttgccaagtacagatactttgctcatgctaaggtgaac
gaatcagatttcctgatgatcactaaaaaggggatattttttgtgactaagggcacgttc
gggcagctgacgtgcgagtggcagtatctgtttgatgagtttaccaaagcgcccatagtc
atggagggcaggagactgcggatagaagcaaaggaacgagtcaaatcagtgtttcacgcc
aaagagtttgggaagatcatcaatttcaaaactccagaattggcaaagtgggttcttgcc
aagcttgaggacgccagggaaactctacccaagtaa
DBGET
integrated database retrieval system
