Carassius auratus (goldfish): 113043433
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Entry
113043433 CDS
T07313
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113043433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113043433
03036 Chromosome and associated proteins [BR:
caua03036
]
113043433
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113043433
Coactivators
SAGA/TFTC/STAGA complex
113043433
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113043433
STAGA complex
113043433
TFTC complex
113043433
SAGA complex
113043433
SLIK complex
113043433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD_LRWD1
VPS8_N
WD40_like
LisH_PAC1
PROPPIN
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
113043433
NCBI-ProteinID:
XP_026058648
Ensembl:
ENSCARG00000009085
UniProt:
A0A6P6JG69
LinkDB
All DBs
Position
1:5742116..5747312
Genome browser
AA seq
741 aa
AA seq
DB search
MAAVQDGPMELDAEKETKPEILSDGTSNLSGNTASGTLSSSPLTAAPAGGAPKMEDQQTL
IAVLQFLKRNKLTDSVEILRREAGLGEDQEDSLATDGSGGGKGDGDGGDAHSLLSRVSIT
SAVAPQNMPVKRADDQPDVSVVLSAYSQQGDPSLYQVYYSGLKNFIESVLDCHRAELSQL
FYPLFVHMYLELVYNNHENEAKAFFEKFSGDQECYYQDDLRVLCGLTKKEHLKGNEALLD
FRTSRFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKSQIDSMSGSL
AGEARREVNKAKVFYGLLKEPEIEVPLDDEDEEAENEEGKPKKKKTKKDSLGSKSKKQDP
NAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLGPENLPSICFYTFLNAYQGLTAVDFT
DDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNMIDKESDDVLERIMDEKTASESKIL
YGHSGPVYGVSFSPDRNYLLSSSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQFSPFGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTVRLWDVLNG
NCVRIFTGHKGPVHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGHTDTIYALKF
SRDGEILASGSMDNTVRLWDSMKAFDEVETDDFTATTGHIHLPDNSQELLLGTYHSKSTP
VTHLHFTRRNLLLAAGGYNSQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggaccgatggagctggacgcagagaaagagacaaagccagag
attctcagcgatgggacgtcaaacctctcggggaacacagcgagtgggacgctgtcgtca
tcgcccctcaccgctgcccccgccggcggagccccgaagatggaggaccagcagactttg
atcgcagttctgcagtttctaaagcggaataaactgacggattctgtggagatcttgcgg
cgggaagccggtctaggagaagatcaggaggactcgctggctaccgacggcagcggagga
gggaagggagacggggatggaggggatgcacactctctgctcagccgggtgtccatcaca
tcagcagtcgccccccaaaacatgcccgtgaagagagcagatgaccagccggatgtcagt
gtggtgttatcagcgtacagccagcagggggatccctctctgtaccaggtgtactacagc
ggcctgaagaacttcatcgagtccgtgctggactgtcaccgagcggagctgtcccagctc
ttctaccctctgttcgtccacatgtacctggagctggtctacaacaaccatgagaacgaa
gcaaaggctttctttgagaagtttagcggtgatcaggagtgttactatcaggatgacctg
cgcgttctctgcggcctcactaagaaagagcacctgaaggggaacgaggcgctgctggac
ttccgcaccagccgtttcgtgctgcgcatctccagagactcgtaccagctgctgaagaga
cacttgcaggaaaggcataataaccagatatggaacatcattcaggagcacttgtacatc
gacatctttgatggcatgcctcgcagcaagagccagatcgacagcatgtccggcagtctt
gcgggagaggccagacgagaagtcaataaagccaaggtattctatggactgctaaaggag
ccagagattgaggtcccgttagatgatgaagatgaagaagcagagaatgaggaaggcaag
cccaagaagaagaaaacaaaaaaggacagcctgggctccaagagtaagaaacaagacccc
aacgctcctcaacagaacaggatccctctgccggagctgaaggactcggacaaactggat
aagatcatgtacatgaaggagagcaccaaaagaatccggctcggccccgagaacctgcct
tccatttgcttctatacgttcctcaacgcttaccagggtttgacggcggtggacttcacg
gacgactccagtctgttggcgggagggtttgcagactccacagtccgcgtgtggagcgtc
acacccaagaaattgcgcaaagtcaaatctgcagcagatctgaatatgattgataaagag
tctgatgacgttctggagaggatcatggatgagaagacggccagtgagtcgaagatactc
tacggtcacagtgggccggtgtatggtgtcagcttcagtccagacaggaactatctgttg
tccagttcagaggacggtacggtccgactgtggagcctgctgacgtttacgtgtctcgtg
gggtataaaggacataactatccagtgtgggacactcagttctcacccttcggctattac
tttgtgtcaggaggacacgatagagtagcacgcctctgggcgacggatcattaccagccc
ttgcggatatttgctgggcacctggctgacgtcacctgcacacggttccaccccaactct
aactatgtggccacaggctcgaccgaccgcaccgtacgcctctgggacgtcctgaatgga
aactgtgtccgcattttcacaggtcacaaggggcccgtccattctctagcattctcacct
aatggaaagttcctggcgtctggatccacagacgggagagttttgctatgggatattgga
catgggcttatgatcggagagctgaagggtcatacagacacaatttatgccctcaagttc
agcagagatggagagatcctcgcatcaggttctatggacaacacggttcggctgtgggac
tccatgaaggctttcgatgaagtggagactgacgacttcactgcaacgacgggccacatt
cacttgcccgataactcccaggagctgctgctcgggacgtaccacagcaaatccacacct
gtcacccatctgcatttcaccagacgcaacctgctactggccgcaggcggctacaactcc
cagtga
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integrated database retrieval system
