Carassius auratus (goldfish): 113043455
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Entry
113043455 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113043455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113043455
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113043455
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113043455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
113043455
NCBI-ProteinID:
XP_026058652
Ensembl:
ENSCARG00000005036
UniProt:
A0A6P6JG74
LinkDB
All DBs
Position
25:14853907..14865609
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AA seq
519 aa
AA seq
DB search
MFSATRKKFGEGVESDYPDEIYYSQTSMFPHRSEKDMLPSPSPSSSGQLSQLGASLYGPQ
SALGFSIRGMSNNNPQLNRNLTQGTQLPSHSTPTTGVPTMSLHTPPSPNRGILPMNTRNM
MSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGRSQ
GFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLAGRAPYVGM
VTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSSLNSSGKGSSSVDGPKFPGDK
TSSAQNNNQQKKGIQVLPDGKVTNIPLGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSD
LTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGE
DLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYF
FDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgcaacgagaaagaagtttggggagggggtcgaaagtgactaccctgatgaa
atatactatagccagacgtcaatgttcccgcatcgatcggagaaagacatgctgccatct
ccctcgccgtcatcgtcaggtcaattgtcacaacttggtgcgagtttgtatggtccgcaa
agtgcactaggtttctcaataaggggcatgagcaacaacaaccctcaactgaaccggaat
ttaacacaaggcactcagttaccgagccatagcactccgacaacaggcgtcccaacaatg
tccctccacacaccaccttcgccgaacaggggcatcctgcctatgaacaccaggaacatg
atgagttcgcaggtagggcagggcatgggcatgagcggcaggaccaacagcatgggcagc
tctggcctgggtagccctaaccgcagctctcccagcattatctgcatgcccaagcagcag
ccagcacgccagccattcaccatcaacagtatgtcaggatttggaatgggccggagccag
gggtttggcatgaactccttatccaataacatcttcaacgggacagatgggagtgaaaat
gtgacaggaatagacctctcagaattcccagcacttgcagacagaagtcggagggaggga
aacggcaaccctacaccgttgcataatccgctggctggaagggcaccctatgttggtatg
gtcacaaagccatcgaacgagcagtcgcaggacttttccattcacaacgaagacttccca
gccctgcccgggcccaactacaaggacccgacgttgagcacggatgaaagcaaatcaagc
ttgaactcttcaggaaagggcagctcaagtgtagatggacccaagtttcccggcgataag
acatcatcagcacagaataacaaccagcaaaagaaggggatccaggtgttgcctgatggc
aaggtaacaaacattcccttaggaatggtgacagatcagtttggaatgattggactcctg
acattcatccgtgcagctgagacagaccctgggatggttcacctggctttaggaagtgac
ctaacaacgctaggactcaacctcaactctccagagaatctgtatcctaagtttgcatct
ccctgggcttcagctccatgtcgaccacaagacattgacttccatgttccctcagagtac
ttaaccaacattcacataagggacaagctggctgcaataaaactgggacgatacggtgaa
gacctgctgttttacctctactacatgaacggaggagacctcttacaactcctcgctgct
gttgagctcttcaaccgggactggcggtaccataaagaggagagggtttggatcacaaga
gcacctggcatggagcccacgctaaagaccaacacctacgagagaggaacatactacttc
tttgattgtcataactggaggaaggttgctaaggagtttcatctggaatacgacaagcta
gaggaacggcctcatgtgccaaccacctttaattacaatccggcccagcaggccttctga
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