KEGG   Carassius auratus (goldfish): 113043606
Entry
113043606         CDS       T07313                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
  KO
K09447  interferon regulatory factor 7
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04620  Toll-like receptor signaling pathway
caua04621  NOD-like receptor signaling pathway
caua04622  RIG-I-like receptor signaling pathway
caua04623  Cytosolic DNA-sensing pathway
caua05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caua00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    113043606 (irf7)
   04621 NOD-like receptor signaling pathway
    113043606 (irf7)
   04622 RIG-I-like receptor signaling pathway
    113043606 (irf7)
   04623 Cytosolic DNA-sensing pathway
    113043606 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113043606 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113043606 (irf7)
Transcription factors [BR:caua03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    113043606 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 113043606
NCBI-ProteinID: XP_026058887
Ensembl: ENSCARG00000013957
UniProt: A0A6P6JGX7
LinkDB
Position
25:complement(19238512..19244124)
AA seq 421 aa
MAAIQGSAIAKPQFGPWLIEQVESGKYEGLCMIGNDTFRIPWKHNSRRDLGDDDVKIFKA
WAVVSGKIKEHPNDKAKWKTNFRCALSSLKNFEMLEDHSKDPVDQHKVYRIIRPQNHQEV
QSVEPDQLPFIPHLYSVSDEMEQELLSQVETMDLNHHHAETQPWETSSQQIIPTTSSNYF
ETPYSDVQPFQNNTPVPDPQLYTTVQQSNLPGLWDLEISINYRRTEVLKTRLCSPLINFH
YQCNPSELRGVPICFPSTEGLIDQRQIQLTNRILDSIQRGLQLEVNQCGIFGLRQDQCNV
FVSTSDPSEIQNPQPRKLHQNTRELLLSFEKYLKDLKDFTENKRGSPDYTIYLCFGEKLP
DGRPLEKKLITVKVVPLICRVFHEKAQMDGASSLHSENISLQISHNSLYDLINSLGLPSV
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcagcgatacagggaagtgcaatcgccaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatatgagggattgtgcatgataggcaatgacacatttcggatc
ccctggaaacacaactcacgaagagacctcggggacgacgatgttaaaatatttaaggca
tgggctgtggtcagtgggaagatcaaagagcaccctaacgacaaagcgaaatggaagaca
aatttccgctgtgcgctttctagtctaaaaaattttgagatgttagaggatcactccaaa
gatccggtcgaccaacacaaggtctatcgcatcatccgtcctcaaaatcaccaagaggtt
cagagtgtagagccagatcaacttcctttcattcctcatctctacagtgtgtctgatgaa
atggagcaagaattgctcagccaggtggagacaatggatctaaatcatcatcacgcagaa
acccaaccatgggaaacctcttcccaacaaatcattccgaccacctcgagcaactacttt
gagactccctactcagatgttcagccctttcagaataacacccctgtcccagacccacaa
ctctacactacagtgcagcaaagtaaccttccaggtctctgggacctggagatctcgatc
aactacagaagaacagaagttttgaaaactcgcctgtgttcgccactcattaatttccac
taccagtgcaacccatctgagctgagaggagtgccaatctgcttcccatccactgagggt
ctgatcgatcaaagacagatccagttaactaaccgcatcctggacagcattcagagaggc
ctgcagctggaggtaaaccaatgtggcatcttcggcttgcgtcaggaccagtgtaatgtc
tttgtcagcaccagtgacccgtctgagatccagaacccacagcccagaaaactgcatcag
aacaccagagagcttctactcagctttgagaagtacttaaaagatctgaaagattttaca
gagaacaaacggggatctccagattacaccatctacctgtgtttcggagagaagcttcca
gatggaagacccctggagaagaaacttattactgtcaaagttgtgcctctgatctgccgt
gtatttcatgagaaagctcaaatggatggagcatcctctcttcacagtgaaaacattagc
ttgcagatctcccacaacagcctttatgaccttataaattctttgggtttgccttcagtg
gcctaa

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