Carassius auratus (goldfish): 113044007
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Entry
113044007 CDS
T07313
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113044007
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
caua04812
]
113044007
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
113044007
Membrane trafficking [BR:
caua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
113044007
Cytoskeleton proteins [BR:
caua04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
113044007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
TIP49
AAA_5
AAA_14
AAA_16
AAA_22
MIT
Mg_chelatase
DUF815
NPHP3_N
AAA_2
IstB_IS21
nSTAND3
AAA_33
AAA_19
AAA_24
RNA_helicase
AAA_17
Motif
Other DBs
NCBI-GeneID:
113044007
NCBI-ProteinID:
XP_026059367
Ensembl:
ENSCARG00000026789
UniProt:
A0A6P6JIH6
LinkDB
All DBs
Position
26:654088..664651
Genome browser
AA seq
559 aa
AA seq
DB search
MNSGDSARQIGPARAGGRTCGQVSDGIGQSPLHRLRSFIRTLRRLPVSLLRALLLLLLGL
TRPIRRAMAARAKDRCSEDCEETGERIRNHHKQAFEFISLALQIDEDQKGDKKQAVQWYR
KGIAELERGICIQVTGAGEKADRARKLQDKMTSNLQMAKERLELLAKLLPKSPSEDCSGH
TGLSFSNGSLCPVAGSGAVSKKKDTPVRPKNPPKSALRPTPSTGHSGRTGPQSNLKGPPA
RAGNTATASSQRKRDMKNFKNVDSKLANLILNEIIDSGAVVQFDDIAGQELAKQALQEIV
ILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAKESNATFFNISAATLTSKYVGE
GEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDE
RVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRTTLSQKELSQLA
RRTEGYSGSDLTSLAKDAALGPIRELRPDQVRNMPADKMRDIRFSDFEDSLKRIKRSVSP
QTLDQYVRWNSQYGDTTAV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaattctggggacagcgcgagacagataggaccagcgcgcgcaggaggacgcacctgc
ggacaggtgtctgacggaatcggccaaagtccgctgcaccgactgcgctcgttcatccga
accctccgcaggctcccggtgtcgctgctaagagctctcctcctgctcctcttgggtctg
acccgtccgatccgccgagccatggcggccagggccaaagaccgctgctccgaggactgc
gaggaaaccggagagcggataagaaaccaccacaaacaagccttcgagttcatctctctg
gctctgcagatcgatgaggatcagaagggtgataagaagcaggcagtgcagtggtacagg
aaaggcatcgctgagctggagagaggcatctgtatccaggtcactggagctggggagaag
gcagacagggccagaaagcttcaggacaaaatgaccagcaacctgcaaatggccaaagag
cggctggagcttctggccaaactgcttccaaagtccccatcagaggactgctctggtcac
acaggcctgtctttctccaatgggagcctgtgtccagttgcaggcagtggagcagtttca
aaaaaaaaggacacccctgtgcgacccaaaaacccacctaaatctgccctgcgccccaca
ccttcaacgggtcacagcggcaggaccggccctcagagcaacctgaaggggcccccggca
agagccggcaacactgccactgcgtcatctcagaggaaaagagacatgaagaactttaaa
aatgtggacagcaaactggccaacctcatcctcaatgagatcatagacagcggtgctgtg
gtgcagttcgatgacatagcagggcaggaattggcaaaacaggcactgcaggaaatcgtt
atcctgcctgctctacgtccagagctgtttactggtctcagggctcctgctagagggctt
ctgctctttggcccacctggaaatgggaagactatgctggctaaagcagttgcaaaggaa
tctaatgctacgtttttcaacatcagtgctgccactctcacctccaaatatgtgggagag
ggcgagaaactggttcgggctttgtttgcggttgctagggaactgcagccgtcaatcatc
ttcatcgacgagatcgacagtctgctgtgtgagaggagagagggcgagcatgacgccagc
agaagactcaaaacagagttcctcatcgagtttgatggagtgcagtcaggaggagatgag
cgagtgttagtgatgggagccactaacaggcctcaggagcttgatgaggcagttcttagg
cggttcgctaaacgcatttatgtggctttacctacagaggagactcgtctgaagctgctc
aagaacctcctcagcaaacacagaaccactttatctcagaaagagctgagtcagttagcc
aggaggacggagggttactctggcagtgatctgacctcactggctaaagacgctgctctt
ggtcctatacgagagctgaggcctgatcaagtgaggaacatgccagccgataagatgagg
gacatccgtttctctgattttgaagattcgctcaagaggataaagcggagcgtcagtcct
caaacgctggatcagtacgtccgctggaacagccagtacggagacacaaccgctgtatga
DBGET
integrated database retrieval system
