Carassius auratus (goldfish): 113044014
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Entry
113044014 CDS
T07313
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113044014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113044014
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113044014
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113044014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
113044014
NCBI-ProteinID:
XP_026059382
Ensembl:
ENSCARG00000030707
UniProt:
A0A6P6JIJ5
LinkDB
All DBs
Position
26:complement(810899..834546)
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AA seq
1046 aa
AA seq
DB search
MMLCWGSSGSGQLGIGASEAAVFEPRSCCMFDGRGLKEVACGSQHSLFLLHDGSIYACGS
NSCGQLGHDKGGWRPELVGALDAQKIAGVSCGQAHSLAVNEQGQVFAWGAGEGGQLGLGT
AEEAVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLKSLSGIPLAQISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKEGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRHHTLAFVPSTGLLYAFGCNTQGQLGTGLRGNAKSPLPVGNIQPLCIGNTHTKGERCT
IRNIHSGGDHNFLLLSTKEGASCPEDFRIMNAAKSIALINSESLDRWRMKLHDSSDSSIT
NDIILLFSSIACWNASFLDQSDDGHFKTNPKVPGIDFNAVKLLFETLMKPAFARLLEQAT
KSFESLLIPQLTCSPPDVEAMRIYLILSECPALQDSKNYISLTIPLAMAILRLDANPSKV
LDNWWSLMDCEVFSRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNLK
ARRVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKT
TVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFMVLHVRRNHLVSDALRELTVYN
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPIYGMFTQYSESNLLWFSDKCFV
EHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLKVLPTLDDLKELSPTEGRSLQQLLE
YEGDVEETFCLNFAITREYYGITEVKELIQGGKTIAVDKTNRKEFVQAYLQYVFSDAVQE
QYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSASHPTVKM
FWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDM
PCYQTKETLWHRLTQAVEQYEGFSLV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtggctcgggtcagctgggcatcggggcgtcggaggcg
gctgtctttgagccgaggagctgttgcatgttcgacgggaggggtcttaaagaagttgcg
tgcggcagccaacactcgctcttcctgttgcatgatgggagcatttacgcctgtggctcc
aacagctgcggtcagctgggccatgacaagggaggatggaggccagagctggtaggagct
ctggatgctcagaagatcgccggcgtgtcgtgtgggcaggctcactctctggcggtgaac
gagcaggggcaggtgtttgcctggggggccggagaaggagggcagctcggtctgggtacg
gctgaagaggcagtccgtgtgcccaggttgattaaaaagttgtgcgagcatcgaatctca
caagtgatgtgtggcaaccaacactgtatagcactttcaaaagatggtcagttgtttgta
tggggagagaactccagcggtcagctgggattagggaagggagagcccagcactctgtct
cctcaaccgctcaaatctctgagtgggatcccactggctcagatcagcgctggaggagac
cacagcttcgccctgtcgctgtctggagccgtgttcggctgggggaagaacagcgccggg
cagctgggcctcaatgacgagcaagatcgggctgttccctgtcacatcaagttcctgcgc
tcacagaaggtggtgtacatcagctgtggagaggagcacactgccgccttgacaaaggaa
gggggtctgttcacatttggaaacggctcaagaggacagctgggccacgattccaccaga
aacgagcctcttccacgcagagttatggagctcatgggcactgaggtgtctcagatcgct
tgtggccggcaccacacgctggcattcgtgccctccacaggactgctttacgctttcggc
tgcaacactcagggccagctgggtacaggtctcagaggaaatgctaagagtccacttcct
gtcgggaacatccaacccctgtgcattggaaatacacacacaaaaggcgagcgctgcacc
atccgtaatattcacagtggtggcgatcacaatttccttttgttgtctacaaaggagggt
gcatcttgtcccgaggatttccgcattatgaatgccgctaaaagcatcgctctgattaat
tctgagagtctggaccgctggaggatgaagcttcatgacagcagcgattcaagcatcacc
aatgacatcatactcctgttttcctcaattgcgtgttggaatgccagctttttggaccaa
agtgatgacgggcatttcaaaaccaaccccaaagtcccgggcattgatttcaatgccgtt
aagctgctttttgagacgctgatgaaaccagccttcgcaagacttctggagcaggccacg
aagagctttgagagtctcctgatcccccagctgacctgctctcctcctgacgtggaagcc
atgcggatctacctgatcctgtctgaatgtcccgccctccaggactccaaaaactacatc
tctctcaccatccctctagccatggccatcctcagactggacgccaaccccagcaaagtc
ctcgataactggtggtctctgatggattgcgaggttttctccagactagtggagatgtac
aaaagcatagttgtgtttctgttgactggcgggaaggcgctcctgatgcctgtgtttctg
gagagctacaccagcgctgccctgcgactgctggagaagctccacaaggtcaatctgaaa
gcccgtcgtgtggaatacaaccacttctacatccctgacatcgccaccctggtggacatc
caggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcgataccctcca
gtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaagaca
accgtgctgcaaacagatgctgagctgcaaatgcagatggcagtaagcggggctaacttg
cacaacgtcttcatgctgttgactatggaacctttgctggctagaaaccctttcatggtg
cttcacgttagaaggaaccacttagtcagcgatgctctccgggagctcacagtctacaat
gacgtagacttgaagaagccccttaaggtcatctttgatggagaggaagctgtggatgca
ggaggagtcacaaaggagttcttcctgctcctgcttaaagagctgatggatccgatctat
ggcatgttcacccaatattcagagtccaatcttctgtggttctctgataaatgttttgtg
gagcacaattggttccatctgattgggatcatctgtggtttggccatctataactctact
gtggtggacttgcactttcctctggtgctctacaaaaagcttctgaaagttttgcccaca
ctggatgacctgaaagagctttcacctacagagggaaggagtcttcagcagctgctggag
tatgagggcgatgtggaggagaccttctgtctgaactttgcaattacgagagagtattat
gggataacggaggttaaagagctgatacagggcgggaagaccatcgctgtggacaagaca
aacagaaaggagtttgttcaggcgtatttacagtatgtgttcagtgatgccgtacaggag
cagtattcggccttctccagtggtttcctgaaggtctgtggtggggagatcctctctctc
ttccagccctctgagctcatggccatggtggtgggaaacaacaactacaactgggaggag
atggagaagaatgcctcctacaagggcgagttctctgcatcacacccaacggttaagatg
ttttgggaggtgtttcatgagtttcccttggagaaaaagaaacagtttttattgtttttg
acaggcagtgaccgcatccccatccacggcatggccagtctacgcatcgtcattcaatcc
actgctgcagaagagcactaccttcctgtggcccacacctgctataacatgctggacatg
ccctgctaccagaccaaagagaccttgtggcaccggctcacgcaagccgtggagcagtac
gagggcttcagtctggtctga
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