Carassius auratus (goldfish): 113044046
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Entry
113044046 CDS
T07313
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113044046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113044046
03036 Chromosome and associated proteins [BR:
caua03036
]
113044046
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113044046
Coactivators
SAGA/TFTC/STAGA complex
113044046
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113044046
STAGA complex
113044046
TFTC complex
113044046
SAGA complex
113044046
SLIK complex
113044046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
TFIID_NTD2
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
VPS8_N
WD40_like
PROPPIN
RAB3GAP2_N
LisH_PAC1
LisH_TPL
Beta-prop_WDR11_2nd
DUF4719
Motif
Other DBs
NCBI-GeneID:
113044046
NCBI-ProteinID:
XP_026059421
Ensembl:
ENSCARG00000007611
UniProt:
A0A6P6JIB6
LinkDB
All DBs
Position
26:complement(1473075..1481448)
Genome browser
AA seq
737 aa
AA seq
DB search
MAAVQDGQMELDAEKETKPEVLSDGTSNLSGSTASGTPLTAGGAPTQEDQQTLIAVLQFL
KRNKLSDSVEILRREAGLGDQEDSQTLEGSGGGKGDGGGGDANSLLSRVSIPSAAAPQNT
PTPATVKRADEQLDVSVVLSAYSQQGDPSLYQVYYSGLKNFIESVLDCHRAELSQLFYPL
FVHMYLELVYNNHESKAKAFFEKFGGDQECYYQDDLRILCGLTKKEHLKGNEALLDFRTS
RFVLRISRDSYQLLKRHLQERHNNQIWNIIQEHLYIDIFDGMPRSKSQIDSLSGSFAGEA
RREVNKVKVFHGLLKEPEIEVPLDDEDDEAENEEGKPKKKKTKKDSVGSKSKKQDPNAPQ
QNRIPLPELKDSDKLDKVMYMKECTKRIRLNPENLPSICFYSFLNAYQGLTAVDFTDDSS
LLAGGFADSTVRVWSVTPKKLRKVKSATELNLIDKESDDVLERIMDEKTASELKILYGHG
GPVYGLSFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTHFSPFGYYFVSG
GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSTDRTIRLWDVLNGNCVR
IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIGELKGHTDTIYALKFSRDG
EILASGSMDNTVRLWDSIKAFDDVETDDFTAATGHVPLPDNSQELLLGTYHSKSTPVTHL
HFTRRNLLLAAGAYTSQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagatggacagatggagctggacgcagagaaagagacaaagccagaa
gtcctcagcgatgggacgtcaaacctctcggggagcacagcgagcgggacgcccctcacc
gccggcggagccccgacgcaggaggaccagcaaactttgatcgcagttctgcagtttcta
aagcggaataaactgtcggactcggtcgagatcctgcggcgggaagccggtttaggagac
caggaggactcacagactctcgagggcagcggaggagggaagggggacgggggtggaggg
gatgcaaactctctgctcagccgggtgtccatcccatcagcagccgccccccaaaacaca
ccgactcccgcaacagtcaagagagcagatgagcagctggatgtcagtgtggtgttatca
gcctacagtcagcagggggatccctctctgtaccaggtgtactacagcggcctgaagaac
ttcatcgagtccgtgctggactgtcaccgagcggagctgtcccagctcttctaccctctg
ttcgtccacatgtacctggagctggtctacaacaaccatgagagtaaagcaaaggctttc
tttgagaagttcggcggcgatcaggagtgttactatcaggatgacctgcgcattctctgc
ggcctcactaagaaagagcacctgaaggggaacgaggcgctgctggacttccgcaccagc
cggttcgtgctgcgcatctccagagactcgtaccagctgctcaagagacacttgcaggaa
aggcataacaaccagatatggaacatcattcaggagcacttgtacatcgacatctttgac
ggcatgccacgcagcaagagccagatcgacagcttgtccggcagttttgcaggagaggcc
aggcgagaagtcaataaagtcaaggtattccatgggcttctaaaggagccagagatcgag
gtcccgttagatgatgaagatgatgaagcagagaatgaggaagggaagcccaagaagaag
aaaacaaaaaaagacagtgtgggctccaagagtaagaaacaagaccccaacgctcctcaa
cagaacaggatccctctgccggagctgaaggactccgacaaactggacaaggtcatgtac
atgaaggagtgcaccaagagaatccggctcaacccggagaacctgccttccatttgcttc
tattcgttcctcaatgcctaccagggtttgacggcagtagacttcactgatgactccagt
ctgttagcgggagggtttgcagactccaccgtccgcgtatggagcgtcacacctaaaaaa
ctacgcaaggtcaaatctgcaacagagctgaatctgattgataaagagtctgatgacgtt
ctggagaggatcatggacgagaagacggccagtgagctgaagatcctctacggtcacggc
gggccggtgtacggtctcagcttcagtccagacaggaactatcttttgtccagttctgag
gacggaacagtcagactgtggagcctgcaaacgtttacgtgtctcgtggggtataaagga
cataactatccagtgtgggacactcacttctcaccctttggttattacttcgtgtctgga
ggacatgacagagtagcacgcctctgggcgaccgatcattaccagcccttgcggatattt
gctgggcatctagctgacgtcacttgcacgcgattccaccccaactctaactatgtggcc
acaggctcgactgaccgcactatacgcctctgggatgtcctgaatggaaactgtgtccgc
attttcactggtcacaagggccccatccattctctagcattctcacccaatggaaagttc
ctggcatctggatccacagacgggagagttttactatgggatattggacatggactgatg
atcggagagctgaagggtcacacagacactatttatgccctcaagttcagcagagatgga
gagatcctcgcatcaggctctatggataacacagttcgactatgggactccattaaggct
ttcgatgacgtggagaccgacgacttcactgcagcgacgggccatgttcccctgccggat
aactcccaggagctgctgcttgggacgtatcacagcaaatccacacctgtcacccacctc
cacttcaccagacgcaacctgctactggctgcaggcgcgtacacctctcagtga
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integrated database retrieval system
