Carassius auratus (goldfish): 113044051
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Entry
113044051 CDS
T07313
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113044051
Membrane trafficking [BR:
caua04131
]
Protein recycling
Others
Others
113044051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
113044051
NCBI-ProteinID:
XP_026059424
Ensembl:
ENSCARG00000008374
UniProt:
A0A6P6JIB5
LinkDB
All DBs
Position
26:1704731..1848386
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AA seq
1240 aa
AA seq
DB search
MERGIRYCRVNAFCTLLLVLFAWVPVTKTVITCRSCHLLDKWSGRELLVRMDSGVDFGKV
GDKNGDGSTALFNLAGAETGQPDCGATDNCEHAHFVRKRNTDRLRSEKMPPNDKWKSMRS
NGKVYNIKRPGSQGSAPGEPQRRVRRSTQGSGSPPNARSLPAFGNSTGRAARRVPRSDLR
GNRDERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLGSV
TESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEG
ATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRFYWSK
LGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQV
STGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSE
AGGVYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKGRDWR
LLQAPSADLRGNRIHCMLPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGAELT
SSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVWNK
YSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDYVQWD
LHDQGDRCLMGVKRVYRKLKPIARCVMGKTYSVTMISEPCDCTESDFECDYGFERRADGK
CTPAFWFLPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEKYTARRQLCPSQAPRGLH
LVTSEGKLTASVASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKHIYKN
VGIYRVSATAENSLGSETVLLFLHITCQLESIHLSAPFVAVKNKEVNLTVVLSPSQVGTV
TYIWWLGNNSEPVITLEGSVAFTFPREGISVVTVQVSAGNTILQDRKTIAVHEYFRSHLL
AFSSNLDDHNPDVAEWRLDVSRVIKTSMVQATGVDPEQLLVTVLPGLPTAAEFFLLPDKQ
LTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQITVYAAHLSAAPLVDTSENHSG
SAMLMLLSVVVVGLAVFLIYKFKRKIPGLHVYAAMQDEKEQEMIQSPVSPTDSTPSCSSQ
RELLTSLEPLDTEPNTQTIECINPHPRVKFSSDLPTYIDV
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggaatcagatattgccgggttaatgctttctgcaccctgcttttggttttg
ttcgcttgggttccggtgaccaaaacagtgataacttgcaggtcatgtcacctgctggat
aagtggagcggtcgggaattattggtgaggatggacagtggtgtcgattttggcaaagtt
ggtgataaaaatggagacgggtcaacggcgctgtttaatttggctggtgctgaaactggt
caacccgactgcggcgcaaccgacaactgcgagcacgctcactttgtgcgtaaaaggaat
acggaccgtctccgctcagagaaaatgccacccaatgataaatggaagtcgatgcgcagt
aatggcaaagtttataacatcaaacgtccaggttcacaaggttcagcccctggagagccc
caacgccgagtgcgtagaagcacccaaggatccggctcgcccccaaatgcgcgctcgctc
ccggcttttggcaatagcaccgggcgggctgcgcgcagagtcccccgatctgatctgaga
gggaacagggatgagcggagaacggccacatcgcgacaggaggagctgaaacttaccagc
tctacctttgcgctgacaggagattccgctcacaaccaagccatggtgcactggtccggc
caaaacagcagcgtgattctcatgctgaccaaactgtatgacttcaatctgggcagtgtc
acagagagctccttatggaggtcaacagattacggaaccacttacgagaaactcaatgaa
aaggtgggagtaaagaccatcctcagctatctgtacgtcagccctaacaacaagcgcaag
atcatgctgctgacagatccagaggtggagagcagtttgctcatcagctcagatgaaggt
gccacctatcaaaaatatcgcctcaacttctacatcctcagcctgttgtttcaccctgag
caggaagactggatccttgcctatgggcatgaccagaagctctacagctctgttgagttc
ggccgtcgatggcagctcgttcacgagcgggtggcgcccaatcgattctactggtctaaa
ctgggccttgataaagagccgggcctgattcaccttgagaccagcatctcagaaacccag
gctctttatgtcacatgcaagcttcagaactgcacagatgccaacaagggcaaacctttt
cctggatacattgaccccaactccctggtggtccaagatgagtatgtgtttgttcaggtg
tcaaccggcggtcggccaatctactacgtgtcatccaggcgagatgtgtttacacccatg
aagcttcccaaatacacccttccaaaggatctgcatgtgatcagtacagatgagaaccgg
gtcgtggcggcagttcaagagtggaaccagaatgacacttacaacctgtacgtgtcagag
gccggaggcgtttactacacgctggctttggagaacgtcatgagcagtatgggaccagag
ggaaatgtcatgatagatctatatgaggtggcaggaataaaaggcatgttcttggctaat
aagaagctgaataatgaggtgaagacatacataacctataacaaaggccgtgactggagg
ctcctgcaggctccctcggctgatctcagaggaaaccgaatccattgtatgctgccgtac
tgttccctgcatctccacctgcacgtatctgcaaacccatacacatctggaaacatagcc
agcagagagtctgcccctggaatcatagtagcatcaggttcaatcggcgcagagttaacg
agcagcaacgttagcatgttcatcacatccgacgctggaaacacgtggcggcagatattt
gatgaagagtacagtgtgctgtatctggatcaaggcggagctttagtggcaattagacac
acccctcttcccatcaggcacctctggttgagctttgatgaggggagggtgtggaacaaa
tacagcttcacttcatccccactgttcgtggacggtgtcttgggcgaaccgggcgaggaa
acgcttataatgacgatcttcggtcacgtcagtcaccgctcagaatggcagctggtaaag
atagacttcaggtctatctttaacagaagatgcatcgagtctgactatgtgcagtgggat
ttacatgaccagggtgaccgctgcctcatgggagtcaaaagagtctaccgaaagctaaag
cccatagccaggtgtgttatgggtaaaacctactctgtcacgatgatatccgagccatgt
gactgcactgagtcagactttgagtgtgattatggcttcgagagaagggctgatgggaaa
tgtactccagcattctggttcctgccctcctccatgtctcggacctgtactacagaacac
acattcctcaacagcactgggtacagaaaggtggtgtctaataactgcaccggtggagtg
atggagaagtacacagctcgtaggcagctgtgccctagccaggcccctcggggccttcac
ttagtgaccagcgaagggaagctaacggcttctgttgccagcaacgtcacctttctcgtc
ttcctggaggagggtgatggatcgaaaaccagcatcacagtggatttcggcgatggaaat
gctttcacctactccaacgtgagctctatcgaagatggcattaaacacatctacaagaat
gtgggaatctaccgagtgtcagccacggcggagaacagtctgggctcggaaacagtgctc
ctcttcctacacattacatgtcagctggagtctattcacctctccgccccttttgtcgct
gtgaaaaataaagaagtcaatctgacggtggttctctcgccaagccaagtgggaacggtc
acctacatctggtggcttgggaacaattcagagcccgtgatcacgctggaggggagtgtg
gcattcacgttccctcgagagggaatcagcgttgtcactgtgcaggtgtctgctgggaat
accatcctgcaagacaggaaaaccatcgctgtccacgaatacttcagatctcatcttctt
gccttttcatctaatcttgatgatcacaaccctgatgtggctgaatggaggcttgatgtg
agtcgagtcattaaaacatctatggtgcaggcgacaggagtggatccagagcagctgttg
gtcactgtgttgcccggactgccaacagcggccgagttcttcctgttaccggacaaacag
ctgacagaggggaaaccagacaaaacagccacccatttagaccagctctcagaactggtt
ctcagcgctctgaatcagaatctggttcagttcacactcagaccaggagtccagatcaca
gtatacgctgcccatttatcagcagcgcctctagtggacacaagtgagaatcacagtggc
tcagctatgctcatgctcctctctgtggtggtggtgggtttagccgtgttcctcatctat
aaattcaaaaggaagatcccaggcctccacgtctatgcagcgatgcaggacgaaaaagag
caagaaatgatccagagtccagtttctcccactgacagcacacccagctgcagctctcag
agagaactgctcacatcactggagcctctggacacagagcccaacacccagaccatcgaa
tgcatcaatcctcatccacgtgtcaaattctcatcagatcttcctacatacatcgacgtt
tga
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