Carassius auratus (goldfish): 113044077
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Entry
113044077 CDS
T07313
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua02010
ABC transporters
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113044077
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113044077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113044077
Transporters [BR:
caua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113044077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
113044077
NCBI-ProteinID:
XP_026059464
Ensembl:
ENSCARG00000015545
UniProt:
A0A6P6JIF3
LinkDB
All DBs
Position
26:complement(2666397..2701183)
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLHYPPFEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQQDK
SFDGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSEFLENNASLPQHAVRQIVEANVNLE
KVLIKGFGVHLRDLCNTTSLEDFVTIADKNVSQLTQNIICQSSAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIFQDVSIATDSLLESLGALAVELVSMKSWRDMRNEIQYLTGNSSQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDSDSEPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQELGVLRDLGGM
WEEMRPKVWNFMESSEEMDLVRMLLQNNASARFFNAKLSGTNWRVEDVSSFLSKASEDTR
PHGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMHLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
LVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYSLTTSISLMLFDSLLYA
VMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGGITSAPTNKKENAEAVCIEEEPAHL
DPGVYIENLVKVYSNGKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTDLNTIRQNLGVCPQHNVLFSMLTVEEHIWFYASLKGLPEEKVKSEMEQIV
MDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SVSSCRTSSSTVSYSKASLKKEDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGIIPARRNRRHAFGDHQSCLKPFTEDDLDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFSFISNDAPEDRHTNKLLEALMDNPAYNEQCTDQQNAASKSCPIKD
GDWMVPEIPRTIQDIFVKGNWSMENPSPLCECSCEGSKKMLPECPPGAGGLPPPQIKVTI
NETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGDEITV
AIAHIRNRFSLQTGTAADRFLGSLSTFIRGLDTKNNVKIWFNNKGWHSIGAFLNVMNNAV
LRANLPPGLDQSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFICFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGVIFFCITVLIQYRFCIKARSVSTKLKPIGEEDEDVARERQRILCGGGHTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVTGADPQLE
PVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEQLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDISINKNDAIVEMSHLNAFLVDEKAKETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagttgggtttgctgttgtggaagaacttcacttaccgacggaga
caaactattcagctgctgatcgagatcatatggccactcttcatctttttcatcttgata
tctgtcagactccactatcctccattcgagcaacatgaatgccactttcccaacaaggcc
atgccctctgcagggactttaccatgggtacagggcatcatctgcaatgccaacaacccc
tgctttcgctaccccacccctggagagacccccggggtggtgggcaacttcaatgactcc
atcatctcccgactgttcatcgatgccaagaaaattctcctctacagccaacaggacaag
agctttgacggttttaaaggactggtccgggccttgagaaaactgcagagaaacactgaa
gggttcaagctgaaggacttcctccgtgataatgaaacgttgtctgagtttcttgagaat
aatgctagcctgccccagcatgctgtgagacagatagtggaggctaacgtcaacttggag
aaggttcttattaaaggcttcggtgttcatctcagagacctgtgcaataccacctcactg
gaggatttcgtgactatagccgataagaacgtgtctcagctgacgcaaaacatcatctgt
cagtcgtctgctgaatggctgaacaacgcagagagccacttcctgtccaacctggacttc
ctgaagccaatacggaaagatgtcaagtctgacccgaagattttccaagatgtgtctata
gcaacagacagtcttctggagagtttgggagcgttagcggtggagcttgtgagtatgaag
agctggcgggacatgcgcaacgagatccagtacctgacgggcaacagctcacagtccccc
aaccacatgtaccaggccgtgtcccgtatcgtctgcggtcacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggaaactac
ggcaatgacagcgacagcgagcccgtctccgtctacgacaactcctccacgccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagagctctg
aagccactgctcatggggaagatcctgtacaccccagacacccctgccacccagaggatc
atacaagaggtcaataagacgtttcaggagctcggtgtgctcagggacctcggtggcatg
tgggaagagatgagacccaaagtatggaacttcatggagagtagtgaggagatggacctc
gttcggatgctcctccagaacaacgctagcgctcgcttctttaacgccaagctgagcggg
acgaactggcgtgtggaggacgtgtccagctttctgtccaaagcttcagaggacacgcgt
ccccatggttcagcgtacacatggcgggaagtgttcaacgagacggatcaggccatccag
accatctcacggttcatggagtgtgtgaacttggataagctggagccggtggctaatgag
gagcgtttggtaaacaagtccatgcatctactggatgaccgcaagttttgggcggggata
gtgtttcctgacatgcaggccaacacatctgacctgccgcccaacgtcaattacaagatc
cgcatggacatcgataacgtggagcgcaccaacaagatcaaggacggatattgggatccc
ggtcctcgagcggacccgtttgaagacctgcggtacatctggggcggcttctcctacctg
caggacgtgattgaacacgggatcatacgagctctgaccggcagcaaggagaaaacgggc
gtttacatccagcagatgccttatccctgctatgtggatgacattttcctgcgggtgatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatc
aagggtgtggtgtacgagaaggaagcccggctcaaggagaccatgaggattatgggtctg
gataatggtatattgtggctgagctggttcatcagtagtctgatcccactgctcatcagc
gccgccctgctggtgctcatcctgaagatggggaatctgctgccgtacagtgatcctggt
gtagtctacttgttcctggcctcgtttgcggtggtgactatcatgcagtgtttcttgatc
agcacgttgttctcccgcgctaacctcgccgcggcctgcgggggcatcatatacttcacc
ctctaccttccctatgtgctgtgcgtggcctggcaggattacgtcggctttggagccaaa
ctagtagtgagcctcttgtctccggtggcgttcggcttcggctgtgagtactttgctctg
ttcgaggagcagggtgtgggcatccagtggagtaacctgctctccagccccatgcaggag
gacagctacagtctcaccacatccatctcgctcatgctcttcgattcgctgctctacgcc
gtcatgacctggtacattgaagctgtgtttccaggtcaatacggcatcccacgaccctgg
tacttccccttcaccaagtcatactggtgcggagagaaatgtggggggattacatcagca
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaagaaccagctcacctg
gatccaggtgtttacatcgagaacctggtgaaggtatacagcaacggcaaactagcagtg
gacgatttgactctgggtttttatgagggtcagatcacctccttcctgggtcacaacggt
gctgggaaaaccacaaccatgtctatcctcactggcctgtttcctcccacctcgggcacc
gcttacatccagggcaaagacatccgcaccgatctgaacaccatacgccaaaacctgggc
gtctgtccgcagcataacgtcctatttagcatgctcaccgtggaggagcacatctggttt
tatgcaagtctgaagggtttgcctgaggagaaggtgaagtcagagatggagcagatcgtg
atggacctcggcctgcctcataaacgcaaatctcgcaccagccagctctcaggaggaatg
cagaggaagttatcagtagcgctggcgtttgttggagggtcaaaggtcgtgatcctggat
gagcccacagctggagttgatccttacgctcgccggggcatctgggacctgctgctcaag
tatcgccaaggacgcaccatcatcctgtccacccaccacatggacgaagccgatatcctg
ggggatcgcattgccatcatctcccacgggaagctgtgctgtgtgggctcctctctgttc
ctcaagacccagctggggacgggatattacctgacgctggtgaagaaggacttcgatctc
tcggtcagctcctgccgtacctccagcagcaccgtctcctactccaaagcaagcctcaag
aaggaagacagtgtatctgagagcagctctgatgcaggactgggcagcgaccatgaaagt
gaaaccaccacaatagacatctccttgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagatctcgggcacgagatcacttacgttctgccttacgagtcggcc
aaagacggagcgtttgtggagctcttccatgagatcgacgaccggctcactgacctcggc
atttctagctacggcatctctgacacaaccctggaggagattttcctcaaagtggcagag
gacaacggtgttgatgctgagatgtcagatgggattatacccgcacgcaggaaccgcaga
catgcttttggtgaccatcagagctgcctgaagcctttcactgaagacgaccttgatttc
aatgactctgaaggtgatccagaatctcgtgagacagactggctgggcggtgctgatggg
aaagggtcgtaccaggtgaagggctggagtctgaagagacagcagtttgtagctttgctc
tggaaacgcttcctgtatgccagacgttcccggaaaggtttctttgctcagattgtgctt
cccgctgtgttcgtgtgcatcgctctggtcttcagcctcattgtccctcctttcggaaag
tatcccagtcttgctctggagcccagcatgtatgaggagcagttctccttcatcagcaat
gacgcaccagaagacagacacacgaacaagttacttgaagctctgatggacaatcccgct
tacaatgaacaatgtacagaccagcaaaacgctgctagcaaatcatgtccaattaaagat
ggagactggatggttccagagattcccaggaccattcaggacatcttcgtcaaagggaac
tggagtatggaaaacccatcgcctctgtgtgagtgcagctgtgaaggaagcaaaaagatg
cttcccgagtgtccgccaggcgcagggggtctgccgccgcctcagatcaaagtcaccatt
aatgaaaccctgcagaatctgaccggcagaaacatttcagactacttggtgaaaacatat
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcaggtatggt
ggattctcattgggtgctagaagctctcaggccctcccccctggtgatgagatcactgtt
gccatcgctcacattcgtaaccgcttcagtcttcaaacgggaaccgcggctgaccgcttt
ctgggaagcctgtcgactttcatccgaggtctcgataccaagaacaatgtgaagatctgg
ttcaataacaagggctggcacagtatcggagccttcctcaatgtcatgaacaatgccgtc
ctgcgtgctaatcttccccccggcctggatcagtccaaatttggcatcaaagcgttcaac
catccgctcaacctcaccaaagagcagctctcacaggtggcgctaatgacgacctcagtc
gacgtgctggtgtccatctgcgtcatcttcgccatgtctttcgtcccggccagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagtggagtg
cagcccttcctctactggctggccaactttgtgtgggacatgtgcaattacattgtccca
gcgaccctggtcatcatcatcttcatctgtttccagcaagaggcctatgtgtcctccacc
aatctccctgttctcgccctcctgctgctgctctatgggtggtccataacacccctgatg
tacccagcgtcattcttctttaagattcccagtacagcgtatgtggttttgaccagcgtt
aacatcctcattggaataaatggcagcgtatccacattcgtcctggagcttttcggcagc
aatgagattggtggcatcaacgacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggactcattgacatggtgaagaaccaagctatggctgatgctctggag
agattcggcgagaatcgcttccgctctcctctggcgtgggatatggtgggcaagaatctc
tttgccatggccatagaaggcgtgattttcttctgcatcaccgtccttatccagtaccgt
ttctgcatcaaggccaggtcggtcagcactaaactgaagccgatcggagaggaggatgag
gatgtggccagagagaggcagaggatcttgtgcggaggaggacacactgatatcctggag
ctcaaacagctcaccaaggtttataagagaaagcagaagccagctgttgacagactgtgt
gtgggcatcccaccaggggagtgttttgggttgctcggtgtgaacggagctggaaagacg
agcaccttcaagatgctcacaggagattcggttgtcactagcggagaggcctacttggca
ggaaagagcgtgctgacggagatcgatgaagtgcatcagaacatgggctactgtccgcag
tttgatgccatcaacgacctgctgactggacgagaacatctggagttttacgccattctg
cggggcgtcccagagaaggaagtgtgcgaggtggcggattggggcattcgtaaactgggc
ctgatgaaatatgtagacaaagctgctggcagctacagcggaggaaacatgaggaagctc
tccaccgctatggctctcatcggaggaccgccagtggtgttcttagacgaacccaccact
gggatggaccccaaagcccggcgggccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtcgtcctgacctcacacagtatggaggagtgtgaagcgctctgcactcgc
atggccatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcacttaaagaac
aagttcggtgacgggtacaccatcatcctgcgggtgacgggggccgatccgcagctggag
ccggtgatggagttcatcgagcgggagctgccgggaagcacgctgaaggagaagcacagg
aacatgctgcagtaccagctgccctcgtcgctgacatccctcgcccgcatcttcagcctc
ctctccaagaacaaagagcagctccacatcgaggactactccgtctcacagaccacttta
gatcaagtatttgtcaattttgccaaggaccaaagtgacgaggaccacttaaaagacatt
tccattaacaaaaacgatgcaatcgtggaaatgtctcatctgaatgccttcctcgtggac
gagaaggccaaagagacggtggtgtga
DBGET
integrated database retrieval system
