Carassius auratus (goldfish): 113044108
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Entry
113044108 CDS
T07313
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113044108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113044108
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113044108
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113044108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
113044108
NCBI-ProteinID:
XP_026059518
Ensembl:
ENSCARG00000009456
UniProt:
A0A6P6JIK8
LinkDB
All DBs
Position
26:complement(3666395..3690065)
Genome browser
AA seq
1046 aa
AA seq
DB search
MMLCWGSSGSGQLGIGVSEVAVFEPRSCCMFDGRGLKEVACGSQHSLFLLHDGSVYACGS
NSCGQLGHDKGGWRPELVGALDAQKIAGVSCGQAHSLAVNEQGQVFAWGAGEGGQLGLGT
AEEAVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLKSLSGIPLAQISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKEGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRHHTLAFVPSTGLLYAFGCNTQGQLGTGLRGNAKSPLPVGNIQPLCIGNTHTKGERCT
IRKIHSGGDHNFLLLSTKEGASCPEDFRIMNATKSIALINSESLDRWRMKLHDSSDSSIT
NDIILLFSSIACWNASFLDQSDDGHFKTNPKVPGIDFNAVKLLFETLMKPAFARLLEQAT
KSFESLLIPQLTCSPPDVEAMRIYLILSECPALQDSKNYISLTIPLAMAILRLDANPSKV
LDNWWSLMDCEVFSRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNLK
ARRVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKT
TVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFMVLHVRRNHLVSDALRELTVYN
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPIYGMFTQYSESNLLWFSDKCFV
EHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLKVLPTLDDLKELSPTEGRSLQQLLE
YEGDVEETFCLNFAITREYYGITEVKELIQGGKTIAVDKTNRKEFVQAYLQYVFSDAVQE
QYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSASHPTVKM
FWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDM
PCYQTKETLWHRLTQAVEQYEGFSLV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtggctcgggtcagctgggcatcggggtgtcggaggtg
gctgtctttgagccgaggagctgttgcatgttcgacgggaggggtcttaaagaagtcgcg
tgcggcagccaacactcgctcttcctgttgcatgatgggagcgtttacgcctgtggctcc
aacagctgcggtcagctgggccatgacaagggaggatggaggccagagctggtaggagct
ctggatgctcagaagatcgccggcgtgtcgtgtgggcaggctcactctctggcggtgaac
gagcaggggcaggtgtttgcctggggggccggagaaggagggcagctcggtctgggtacg
gctgaagaggcagtccgtgtgcccaggttgattaaaaagttgtgcgagcatcgaatctca
caagtgatgtgtggcaaccaacactgtatagcactttcaaaagatggtcagttgtttgta
tggggagagaactccagcggtcagctgggattagggaagggagagcccagcactctgtct
cctcaaccgctcaaatctctgagtgggatcccactggctcagatcagcgctggaggagac
cacagcttcgccctgtcgctgtctggagccgtgttcggctgggggaagaacagcgccggg
cagctgggcctcaatgacgagcaagatcgggctgttccctgtcacatcaagttcctgcgc
tcacagaaggtggtgtacatcagctgtggagaggagcacactgccgccttgacaaaggaa
gggggtctgttcacatttggaaacggctcaagaggacagctgggccacgattccaccaga
aacgagcctcttccacgcagagttatggagctcatgggcactgaggtgtctcagatcgct
tgtgggcggcaccacaccctggcattcgtgccctccacaggactgctttacgctttcggc
tgcaatactcagggccagctgggtacaggtctcagaggaaatgctaagagcccacttcct
gtcggaaacatccaacccctgtgcattggaaatacacacacaaaaggcgagcgctgcacc
atccgtaaaattcacagtggaggcgatcacaatttcctgttgttgtctactaaggagggt
gcatcttgtcccgaggatttccgcattatgaatgccaccaaaagcatcgctctgattaat
tctgagagtctggaccgctggaggatgaagcttcatgacagcagcgattcaagcatcacc
aatgacatcatactcctgttttcctcaattgcgtgttggaatgccagctttttggaccaa
agtgatgacgggcatttcaaaaccaaccccaaagtcccgggcatcgatttcaatgctgtt
aagctgctttttgagacgctgatgaaaccagccttcgcaagacttttggagcaggccacg
aagagctttgagagtctcctgatcccccagctgacctgctctcctcctgacgtggaagcc
atgcggatctacctgatcctgtctgaatgtcccgccctccaggactccaaaaactacatc
tctctcaccatccctctagccatggccatcctcagactggacgccaaccccagcaaagtc
ctcgataactggtggtctctgatggattgcgaggttttctccagactagtggagatgtac
aaaagcatagttgtgtttctgttgactggcgggaaggcgctcctgatgcctgtgtttctg
gagagctacaccagcgctgccctgcgactgctggagaagctacacaaggtcaatctgaaa
gcccgtcgtgtggaatacaaccacttctacatccctgacatcgccaccctggtggacatc
caggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcgataccctcca
gtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaagaca
accgtgctgcaaacagatgctgagctgcaaatgcagatggcagtaagcggcgctaacttg
cacaacgtcttcatgctgttgactatggaacctttgctggctagaaaccctttcatggtg
cttcacgttagaaggaaccacttagtcagcgatgctctccgggagctcacagtctacaat
gacgtagacttgaagaagccgcttaaggtcatctttgatggagaggaagctgtggatgca
ggaggagtcactaaggagttcttcctgctcctgcttaaagagctgatggatccaatctat
ggcatgttcacccaatattcagagtccaatcttctgtggttctctgataaatgttttgtg
gaacacaattggttccacctgattgggatcatctgtggtttggccatctataactccact
gtggtggacttgcactttcctctggtgctctacaaaaagcttctgaaagttttgcctaca
ctggatgacctgaaagagctttcgcctacagagggaaggagtcttcagcagctgctggag
tatgagggcgatgtggaggagaccttctgtctgaactttgcaattacgagagagtattat
gggataacggaggttaaagagctgatacagggcgggaagaccatcgctgtggacaagaca
aacagaaaggagtttgttcaggcgtatttacagtatgtgttcagtgatgccgtacaggag
cagtattcggccttctccagtggtttcctgaaggtctgtggtggggagatcctctctctc
ttccagccctctgagctcatggccatggtggtgggaaacaacaactacaactgggaggag
atggagaagaatgcctcctacaagggcgagttctctgcatcacacccaacggttaagatg
ttttgggaggtgtttcatgagtttcccttggagaaaaagaaacagtttttattgtttttg
acaggcagtgaccgcatccccatccacggcatggccagtctacgcatcgtcattcaatcc
actgctgcagaagagcactaccttcctgtggcccacacctgctataacatgctggacatg
ccctgctaccagaccaaagagaccttgtggcaccggctcacgcaagccgtggagcagtac
gagggcttcagtctggtctga
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integrated database retrieval system
